TCONS_00068707 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068707
Unique NameTCONS_00068707
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length483

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068707 ID=TCONS_00068707|Name=TCONS_00068707|organism=Clytia hemisphaerica|type=transcript|length=483bp
GTCCCAAATAGCTTTTCATTGACCCCAATTCGTTTCATAAGACTCATGAC
TGCTGATCCTCCTCAATAATGGATTCGTACACTCGTTTGATGTGTTCAGG
CGTGATTGGAAGCTTCTTGGTCGCAGGTTTAGAACAAGTACGTTTTGCTG
TCTCTAAGGCATAACTGGCCATTACTGAATCTGTTGGGTCAGGTTGGTTA
TTGACATTATGAGTGTGTTTGATTGCGTAAAAGCAGCTTTCGATCACTGA
GAATGATATTCCTGACTGTATGAGGCTGACGAAAAATAGCACCACCTGTA
CGTGTCTTTGGCAGCGAATTCAGCAACTTCATCGAACTTTGCACTCCAGT
TTGACCAACGCTTGAAGTAGGTAGCATATTTTCTAATCGTGTTATTCGCT
CTTGATTTCGACAGCACGTCTTGTAAACCGTGTGCTAGTTCCTTCAGGTG
GTCATCCTGTACCTGGTTAACGATATGAAGCGA
Run BLAST on NCBI

transcript from alignment at scaffold_487:186522..187004

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068707 ID=TCONS_00068707|Name=TCONS_00068707|organism=Clytia hemisphaerica|type=transcript|length=483bp|location=Sequence derived from alignment at scaffold_487:186522..187004 (Clytia hemisphaerica)
TCGCTTCATATCGTTAACCAGGTACAGGATGACCACCTGAAGGAACTAGC
ACACGGTTTACAAGACGTGCTGTCGAAATCAAGAGCGAATAACACGATTA
GAAAATATGCTACCTACTTCAAGCGTTGGTCAAACTGGAGTGCAAAGTTC
GATGAAGTTGCTGAATTCGCTGCCAAAGACACGTACAGGTGGTGCTATTT
TTCGTCAGCCTCATACAGTCAGGAATATCATTCTCAGTGATCGAAAGCTG
CTTTTACGCAATCAAACACACTCATAATGTCAATAACCAACCTGACCCAA
CAGATTCAGTAATGGCCAGTTATGCCTTAGAGACAGCAAAACGTACTTGT
TCTAAACCTGCGACCAAGAAGCTTCCAATCACGCCTGAACACATCAAACG
AGTGTACGAATCCATTATTGAGGAGGATCAGCAGTCATGAGTCTTATGAA
ACGAATTGGGGTCAATGAAAAGCTATTTGGGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042864XLOC_042864Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068707-exon-scaffold_487-1491911889:186522..187004TCONS_00068707-exon-scaffold_487-1491911889:186522..187004Clytia hemisphaericaexon
TCONS_00068707-exon-scaffold_487-1510915933:186522..187004TCONS_00068707-exon-scaffold_487-1510915933:186522..187004Clytia hemisphaericaexon
TCONS_00068707-exon-scaffold_487-1575043694:186522..187004TCONS_00068707-exon-scaffold_487-1575043694:186522..187004Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_487supercontigscaffold_487:186522..187004 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.78928	2.24153	0.439814	0.14343	0	0.47118	0.6149	0.155845	0.153904	0.353563	0	0.431168	0.26465	0.39813	0.600226	0.477513	0.58537	0.640772	0	0.206206	0.44232	0.183189	0.679512	2.3545	1.22766	1.48066	0.308592	0.18948	0.306647	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068707 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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