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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068692 ID=TCONS_00068692|Name=TCONS_00068692|organism=Clytia hemisphaerica|type=transcript|length=3365bp
CGAAGATTTACATTAGGTTTACATTAACTTAACAAGGTCAATAAACAGTT
AGTTTGAACAGCTAGAAAAACTCATAACGTGTTTGGTTAGATGATTCTGg
gaaaaagcaatttttaatttttgatggtgatttttgaCATCTTATTTTCA
TCCAAGTATTTATGTTGCTATCGGAAATGATTAACGTCGTTTAATTTTCT
TCACTAAATAATTACTTTACTTGAGATAGCAGGGAAAAATGAAATGAACC
TGATTTGAAAGGTAAACATTAACTGAACGTCCTTTGAATCATATTTGGAC
GTTAGCTTGGTGAAATCGAGGCTGCTGATATTTATCTTTAAAAGTGGAAT
CATTATCATCGAATGCAAAATTTCACGAAGGAAGTTTATTGAGTGATGGG
ACTCTTTTGAAAGGAGACAAAAATAAAAGTTCAGAGCTCACTAGTGAAAG
TTTGATGTAAAAGATCTGGGAAGGAGCTAAATTTATTGGATTTTATTAGC
AGGTAGAAAGCTGCATCCTTATTGGTGTATAAAAAGAGTATGGCTACCAG
CCGTTCCAGATTAGGAGAGAACTCTTCAGCTAACAGCTCTTTATTGGCAC
CAAAAACATATGGTTCATATTTTCGACCAGAGAATGATCAGCAAGCTGGC
AAAATGAcgcaaatcaaatcaatctggaAAAAACATAAGTTGTTAATCTG
CATTTTCCTGGCTGTGGTAATTGGAATATTAGTCGGCCTTTTGAGCAATG
TATCAGTCCAGGAGCTTGACCAACCAGTTCAAGCCAACGTATTACTCTTT
GTTGGTTTCCCCGGTGAAATTTTTACACGCATGCTCAAAATGTTGGTTCT
ACCATTAATTATTACCAGTTTGATCATTGGGTTTGCCGATCTTGATCACG
AGTCGTCGAAGAAGATAGGGCGCAGAGCTCTTTTATACTACTCGTTTACG
ACTTGCATGGCTGTGGTGCTTGGACTGATCTTGGTTTACTCTATCAGCCC
TGGCAAGTATGGCAatgaaaaacaattcaaagacgATGTAGATCAAACAC
GGATAATGGATACTATCCTTGATCTCATCCGAAACATGTTCCCTGAAAAT
ATCGTTCAAGCTTGTTTAGAAACAGCTGTAACAAGAGCTAAAGAGGTTCC
AAAACACACCGCCTATAATTCGACACGGAATGACACTATCACAAACAAAA
CGGTCCTTATCTCTGGTGAAACAACATATGAATCAGGAACCAATATACTT
GGGATTGTCGTCTTTTCCATCGTTATTGGTGTCCTTCTTGGTAAAATGGG
ATCACAAGCTCAAACCTTCATTGAATGCACCAGGATTTTCAATGACTTGA
CCATGAAGCTTGTTGAGTATGCAATGTGGTATTCTCCTATTGGCATCTTA
AGCTTGGTCATCAATAAATTCGCCTCCATGAAAGATACCTCTGGCGAATT
CCAAAGGCTTGGTTGTTACTTAGGAACGGTTATTTCTGGTTTAGCTCTGC
ACTCCTTGATCGTTTTGCCACTGGCATACTTCGTCATGACACGACGGAAT
CCGTTCACCTTTATCAAAGGAACATTCAAAGCTCTTTTGACCGCATTTGC
GACCAGCTCCAGTTCAGCTACCTTGCCGGTAACCTTCAAATGTCTTGAAG
ATAATAACGGGCTTGATAATCGGGTGACACGGACTGTTTTACCAATCGGA
GCCACAATCAACATGGATGGTAGTGCTCTGTACGAGGCTGTTGCTGCAAT
CTTCATGGCCCAATCCATCGGAATGACCTTGGATATTGGAGAATATGCCA
CTATCAGTTGCGTATCAATACTAGCCTCGATCGGTGCTGCAGGAATACCA
CAGGGTGATTTGGTAACATTGTTTGTAGTTTTACAGGCTGTTGGTTTACC
AGAAGAAGCTATCACTCTTATCCTCTCAGTGGATTGGTTTTTGGATCGTA
TCCGCACTTCAGTAAATGTGCTTGGTGATTGTATCGGTGCCGGCATTGTG
GCTCATCGATCGGAAGGCGATCTTCCTCAAATCCATGCTCCCTTGGAAGC
ATTTGAAAATAGTTATCATCACGAACTCGATGATCAAGAGGATGAAGTGG
TTTAAAACCAATTTACAagaaacccagctggcacaaaacgttgttttaac
gttcaaataacgttatttggacgttatgaatgtcaaatggacgttgtttt
gacgttgtgtgccggctgggaatGGACATCAGGAGAAAGTGATAACTGAT
GAAGTTGATAGTTGATGTAATATGTATGAACAAAGTTTTGTGATTGAACC
CTTTTTGAGGTTTCTGAAAgatgttttttgacttttactcAATGacgctg
aaaaattattttttagactCTGAGCTTACCAGAAGGCAGATATTAATCAG
GGAAGGATTTAATCTCAAAAAATGACTaaattttcacaataaagtTTGGT
GGaagatttatattgatttaaCCTAGGAATACTAATTAATTTAAATTGTA
TTgtaattattttgatttgacaTTTTATTATACAGATTTTTAACCGCACC
CTTTTCTCAGTGACCTAATGACCAGATTGACCCCGAGATTAGGATCTTTT
TCTCCATTCCAGGTTTCATCAAAGATATAGATTTATACTACTACTATACT
GGGattaagaaatttctaatttatcgggttttgaaattcaaaaagaattt
tcaccAGGGTTACTGACTTTTTCGTAAATCTAGGCCATTTTCGATGATTT
TTCAACAGGGCTAATGATAAAGGGGTGTTTAAAGTAAATGGGTAATAAAC
tttacaatttattttttttaatttcatcattttttgtagCGTAATTTGAG
GGTTTaggtttttttaattattcaatttagtattattaatgaaattttta
attgaaagaagTATAGCCAGAATCTGGTCTGGGAACCCCAGAATttattc
gctttaagtgtgacacccctgtgtcacagacctgctgGGACCCAAGGACC
ACTGGAAAATCtgaccaaaatttcgtccccggtggaaatttcagccccac
tgggaaattgactatgatttcatccccattcgaaattcaatgtttaaaaa
ttgtactctaaACCCacccccactggattttttaaccttggaacaatatg
GTACTGCTGACGTCTGAAATAATCTAGGTTATGTTTATTAACGGTAATTT
TGTACATAGAAATCAGTTCAACACTGAGAGACGTGAGTGAGTGTCTTGTG
TGTGAGAGGTGCGTTTTACTAAAGTTTAATTTACTATATACGTTGTCGTC
TTATCTCGGTTCTTTATGGTTTTGTAGCATTTTCAGTTTGTTTAAGTTCA
AGAATTGGTGTTTCC Run BLAST on NCBI protein sequence of TCONS_00068692-protein >TCONS_00068692-protein ID=TCONS_00068692-protein|Name=TCONS_00068692-protein|organism=Clytia hemisphaerica|type=polypeptide|length=521bp
MATSRSRLGENSSANSSLLAPKTYGSYFRPENDQQAGKMTQIKSIWKKHK
LLICIFLAVVIGILVGLLSNVSVQELDQPVQANVLLFVGFPGEIFTRMLK
MLVLPLIITSLIIGFADLDHESSKKIGRRALLYYSFTTCMAVVLGLILVY
SISPGKYGNEKQFKDDVDQTRIMDTILDLIRNMFPENIVQACLETAVTRA
KEVPKHTAYNSTRNDTITNKTVLISGETTYESGTNILGIVVFSIVIGVLL
GKMGSQAQTFIECTRIFNDLTMKLVEYAMWYSPIGILSLVINKFASMKDT
SGEFQRLGCYLGTVISGLALHSLIVLPLAYFVMTRRNPFTFIKGTFKALL
TAFATSSSSATLPVTFKCLEDNNGLDNRVTRTVLPIGATINMDGSALYEA
VAAIFMAQSIGMTLDIGEYATISCVSILASIGAAGIPQGDLVTLFVVLQA
VGLPEEAITLILSVDWFLDRIRTSVNVLGDCIGAGIVAHRSEGDLPQIHA
PLEAFENSYHHELDDQEDEVV Run BLAST on NCBI transcript from alignment at scaffold_487:75577..81394+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068692 ID=TCONS_00068692|Name=TCONS_00068692|organism=Clytia hemisphaerica|type=transcript|length=5818bp|location=Sequence derived from alignment at scaffold_487:75577..81394+ (Clytia hemisphaerica)
CGAAGATTTACATTAGGTTTACATTAACTTAACAAGGTCAATAAACAGTT
AGTTTGAACAGCTAGAAAAACTCATAACGTGTTTGGTTAGATGATTCTGg
gaaaaagcaatttttaatttttgatggtgatttttgaCATCTTATTTTCA
TCCAAGTATTTATGTTGCTATCGGAAATGATTAACGTCGTTTAATTTTCT
TCACTAAATAATTACTTTACTTGAGATAGCAGGGAAAAATGAAATGAACC
TGATTTGAAAGGTAAACATTAACTGAACGTCCTTTGAATCATATTTGGAC
GTTAGCTTGGTGAAATCGAGGCTGCTGATATTTATCTTTAAAAGTGGAAT
CATTATCATCGAATGCAAAATTTCACGAAGGAAGTTTATTGAGTGATGGG
ACTCTTTTGAAAGGAGACAAAAATAAAAGTTCAGAGCTCACTAGTGAAAG
TTTGATGTAAAAGATCTGGGAAGGAGCTAAATTTATTGGATTTTATTAGC
AGGTAAATGTCTATAGCTTTTCTCTGCTGCTGGGTTGGAATTTTCGGGAA
CGATTTTCTACCCGACGTTTAtcattttttgccaaaaaacttaAACTTTG
CTCATGAAAAAGGTCCATAGTCTTTCTAAGgtctatccagatataattgg
gaGTGGGAACAAGtttgcctgtaacttttgatagtcaaatgggctattcc
agaaatagtctgtaccccctatgttgaggaggtgtgacgtccagggtggt
ctggaaaataaagaaTCCAGGGTGGTTtggttttttgaatgataaaattc
CAGGTTGGTCAGTAAAATCGGGTTGAAAATCCATGGTGGTCAGTATAATG
AGGTCAAGAATCCAGGGTGGTCTAAAAAAATGGgaggaaaaaatccaagg
gggcttgaaaagttggaaaaaatccaggggggtcacctttttaaaaaaag
acctcctcaacataggggttacaatttctttctggaatagcccaatacaA
TTATGGAATATTTTTTGGcttgttttagaaaatcaaaagtgttatatttg
aatgtatttttggctgaaaaatttgcaatttttagcggttaaattgcaaa
aattgagctttttttctacttatgctacaacgttcatttttacaccagtg
gtagttcaaccttacgTTAAAaaggttgtcaaatttcaaggcaaacagaa
aagtccttctgAAGATATGGGATCCAAAATACCCCTtgctagcacttttc
tgtgaaatatcaactctccaaatttttactaaaaacggggactatgttat
cttttttgaacagtgcaattaaaagttggaaagtgttaaGTGTTGATGCT
TTGGtattggctgcgtttagaccaactggcatttgtaatttggcatttgc
tcatgagggattcgattttaatagcttttctattgtattttctgtcatgg
catttagggaatcgtctttttagagtcattagtgaaaaggtgattccctc
aagttcaactttgacagatcaaacaatgaaaagcatggaatttctcaaaa
attgcagtcattaagactgaaactttttgccgtagggctaggctatggca
aattttgcaaattttacaatctatagaaagaactgaataaaaaacNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNcatcattaggcatttgacaaaccgaacaattgcgcg
gaacaatagaattcaaaagaatactgcaagcaattacaaatgccagactg
gtctaaacgcagccgtattattggtatcattgactAATGATGTAAGGGTT
TCGAAACGAAGTAAAATAAATCACAGTATgattgttttattgaaaatata
agcatgaacttatattacctttattgttttaagaaattaaagaactttgc
taattcccaaaacactaagcacagtttggctatgaggccATTATCGTAAA
AAgattgtaaaatgtgttatgatgaaaaactgttttatcatcaCTAGccc
cgtttttattaaaaatttagagatttgatgtttcacagaaaagtgctaga
aaggggtatttcgggtcccatatcggCAGAAGGACTTTTCCTAAGGTTGA
ACCTAAGGCTGAattaccactggtgtaaaaatgaacgttatggCATGAGT
AGAAAAacagctcaatttttgcaatcgcaaatttaaccgctaaaaatcgc
gaaaaatacattcaaataaatcgcttttgattctctaaatcgagcaaaaa
aagattttccaaattatatcggactatcaaaagttacaggcattcttgtt
tccactgccaattatatctggatacacTTTAGCTATCTTGAGGCTCCGAT
CGCTCAAGTTACAACTTGTTCTTCACTTTACACTTTATTGTTCTTCACTT
TATGCCAACACAATATCCGTGTTCAGTATGCTCTAAATCAGTTTTTTGTG
ACTCACTTTAAATACCAATTCCATTTTTTACCGAACAGTTATAAGGCCGA
ATTCGAGTTGTGCTCTTACATTAAACTCAAGagaattttaactttttttc
atcaGGTAGAAAGCTGCATCCTTATTGGTGTATAAAAAGAGTATGGCTAC
CAGCCGTTCCAGATTAGGAGAGAACTCTTCAGCTAACAGCTCTTTATTGG
CACCAAAAACATATGGTTCATATTTTCGACCAGAGAATGATCAGCAAGCT
GGCAAAATGAcgcaaatcaaatcaatctggaAAAAACATAAGTTGTTAAT
CTGCATTTTCCTGGCTGTGGTAATTGGAATATTAGTCGGCCTTTTGAGCA
ATGTATCAGTCCAGGAGCTTGACCAACCAGTTCAAGCCAACGTATTACTC
TTTGTTGGTTTCCCCGGTGAAATTTTTACACGCATGCTCAAAATGTTGGT
TCTACCATTAATTATTACCAGTTTGATCATTGGGTTTGCCGATCTTGATC
ACGAGTCGTCGAAGAAGATAGGGCGCAGAGCTCTTTTATACTACTCGTTT
ACGACTTGCATGGCTGTGGTGCTTGGACTGATCTTGGTTTACTCTATCAG
CCCTGGCAAGTATGGCAatgaaaaacaattcaaagacgATGTAGATCAAA
CACGGATAATGGATACTATCCTTGATCTCATCCGAAACATGTTCCCTGAA
AATATCGTTCAAGCTTGTTTAGAAACAGCTGTAACAAGAGCTAAAGAGGT
TCCAAAACACACCGCCTATAATTCGACACGGAATGACACTATCACAAACA
AAACGGTCCTTATCTCTGGTGAAACAACATATGAATCAGGAACCAATATA
CTTGGGATTGTCGTCTTTTCCATCGTTATTGGTGTCCTTCTTGGTAAAAT
GGGATCACAAGCTCAAACCTTCATTGAATGCACCAGGATTTTCAATGACT
TGACCATGAAGCTTGTTGAGTATGCAATGTGGTATTCTCCTATTGGCATC
TTAAGCTTGGTCATCAATAAATTCGCCTCCATGAAAGATACCTCTGGCGA
ATTCCAAAGGCTTGGTTGTTACTTAGGAACGGTTATTTCTGGTTTAGCTC
TGCACTCCTTGATCGTTTTGCCACTGGCATACTTCGTCATGACACGACGG
AATCCGTTCACCTTTATCAAAGGAACATTCAAAGCTCTTTTGACCGCATT
TGCGACCAGCTCCAGTTCAGCTACCTTGCCGGTAACCTTCAAATGTCTTG
AAGATAATAACGGGCTTGATAATCGGGTGACACGGACTGTTTTACCAATC
GGAGCCACAATCAACATGGATGGTAGTGCTCTGTACGAGGCTGTTGCTGC
AATCTTCATGGCCCAATCCATCGGAATGACCTTGGATATTGGAGAATATG
CCACTATCAGTTGCGTATCAATACTAGCCTCGATCGGTGCTGCAGGAATA
CCACAGGGTGATTTGGTAACATTGTTTGTAGTTTTACAGGCTGTTGGTTT
ACCAGAAGAAGCTATCACTCTTATCCTCTCAGTGGATTGGTTTTTGGATC
GTATCCGCACTTCAGTAAATGTGCTTGGTGATTGTATCGGTGCCGGCATT
GTGGCTCATCGATCGGAAGGCGATCTTCCTCAAATCCATGCTCCCTTGGA
AGCATTTGAAAATAGTTATCATCACGAACTCGATGATCAAGAGGATGAAG
TGGTTTAAAACCAATTTACAagaaacccagctggcacaaaacgttgtttt
aacgttcaaataacgttatttggacgttatgaatgtcaaatggacgttgt
tttgacgttgtgtgccggctgggaatGGACATCAGGAGAAAGTGATAACT
GATGAAGTTGATAGTTGATGTAATATGTATGAACAAAGTTTTGTGATTGA
ACCCTTTTTGAGGTTTCTGAAAgatgttttttgacttttactcAATGacg
ctgaaaaattattttttagactCTGAGCTTACCAGAAGGCAGATATTAAT
CAGGGAAGGATTTAATCTCAAAAAATGACTaaattttcacaataaagtTT
GGTGGaagatttatattgatttaaCCTAGGAATACTAATTAATTTAAATT
GTATTgtaattattttgatttgacaTTTTATTATACAGATTTTTAACCGC
ACCCTTTTCTCAGTGACCTAATGACCAGATTGACCCCGAGATTAGGATCT
TTTTCTCCATTCCAGGTTTCATCAAAGATATAGATTTATACTACTACTAT
ACTGGGattaagaaatttctaatttatcgggttttgaaattcaaaaagaa
ttttcaccAGGGTTACTGACTTTTTCGTAAATCTAGGCCATTTTCGATGA
TTTTTCAACAGGGCTAATGATAAAGGGGTGTTTAAAGTAAATGGGTAATA
AACtttacaatttattttttttaatttcatcattttttgtagCGTAATTT
GAGGGTTTaggtttttttaattattcaatttagtattattaatgaaattt
ttaattgaaagaagTATAGCCAGAATCTGGTCTGGGAACCCCAGAATtta
ttcgctttaagtgtgacacccctgtgtcacagacctgctgGGACCCAAGG
ACCACTGGAAAATCtgaccaaaatttcgtccccggtggaaatttcagccc
cactgggaaattgactatgatttcatccccattcgaaattcaatgtttaa
aaattgtactctaaACCCacccccactggattttttaaccttggaacaat
atgGTACTGCTGACGTCTGAAATAATCTAGGTTATGTTTATTAACGGTAA
TTTTGTACATAGAAATCAGTTCAACACTGAGAGACGTGAGTGAGTGTCTT
GTGTGTGAGAGGTGCGTTTTACTAAAGTTTAATTTACTATATACGTTGTC
GTCTTATCTCGGTTCTTTATGGTTTTGTAGCATTTTCAGTTTGTTTAAGT
TCAAGAATTGGTGTTTCC Coding sequence (CDS) from alignment at scaffold_487:75577..81394+ >TCONS_00068692 ID=TCONS_00068692|Name=TCONS_00068692|organism=Clytia hemisphaerica|type=CDS|length=1566bp|location=Sequence derived from alignment at scaffold_487:75577..81394+ (Clytia hemisphaerica)
ATGGCTACCAGCCGTTCCAGATTAGGAGAGAACTCTTCAGCTAACAGCTC
TTTATTGGCACCAAAAACATATGGTTCATATTTTCGACCAGAGAATGATC
AGCAAGCTGGCAAAATGAcgcaaatcaaatcaatctggaAAAAACATAAG
TTGTTAATCTGCATTTTCCTGGCTGTGGTAATTGGAATATTAGTCGGCCT
TTTGAGCAATGTATCAGTCCAGGAGCTTGACCAACCAGTTCAAGCCAACG
TATTACTCTTTGTTGGTTTCCCCGGTGAAATTTTTACACGCATGCTCAAA
ATGTTGGTTCTACCATTAATTATTACCAGTTTGATCATTGGGTTTGCCGA
TCTTGATCACGAGTCGTCGAAGAAGATAGGGCGCAGAGCTCTTTTATACT
ACTCGTTTACGACTTGCATGGCTGTGGTGCTTGGACTGATCTTGGTTTAC
TCTATCAGCCCTGGCAAGTATGGCAatgaaaaacaattcaaagacgATGT
AGATCAAACACGGATAATGGATACTATCCTTGATCTCATCCGAAACATGT
TCCCTGAAAATATCGTTCAAGCTTGTTTAGAAACAGCTGTAACAAGAGCT
AAAGAGGTTCCAAAACACACCGCCTATAATTCGACACGGAATGACACTAT
CACAAACAAAACGGTCCTTATCTCTGGTGAAACAACATATGAATCAGGAA
CCAATATACTTGGGATTGTCGTCTTTTCCATCGTTATTGGTGTCCTTCTT
GGTAAAATGGGATCACAAGCTCAAACCTTCATTGAATGCACCAGGATTTT
CAATGACTTGACCATGAAGCTTGTTGAGTATGCAATGTGGTATTCTCCTA
TTGGCATCTTAAGCTTGGTCATCAATAAATTCGCCTCCATGAAAGATACC
TCTGGCGAATTCCAAAGGCTTGGTTGTTACTTAGGAACGGTTATTTCTGG
TTTAGCTCTGCACTCCTTGATCGTTTTGCCACTGGCATACTTCGTCATGA
CACGACGGAATCCGTTCACCTTTATCAAAGGAACATTCAAAGCTCTTTTG
ACCGCATTTGCGACCAGCTCCAGTTCAGCTACCTTGCCGGTAACCTTCAA
ATGTCTTGAAGATAATAACGGGCTTGATAATCGGGTGACACGGACTGTTT
TACCAATCGGAGCCACAATCAACATGGATGGTAGTGCTCTGTACGAGGCT
GTTGCTGCAATCTTCATGGCCCAATCCATCGGAATGACCTTGGATATTGG
AGAATATGCCACTATCAGTTGCGTATCAATACTAGCCTCGATCGGTGCTG
CAGGAATACCACAGGGTGATTTGGTAACATTGTTTGTAGTTTTACAGGCT
GTTGGTTTACCAGAAGAAGCTATCACTCTTATCCTCTCAGTGGATTGGTT
TTTGGATCGTATCCGCACTTCAGTAAATGTGCTTGGTGATTGTATCGGTG
CCGGCATTGTGGCTCATCGATCGGAAGGCGATCTTCCTCAAATCCATGCT
CCCTTGGAAGCATTTGAAAATAGTTATCATCACGAACTCGATGATCAAGA
GGATGAAGTGGTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068692-exon-scaffold_487-1491911889:75577..76078 | TCONS_00068692-exon-scaffold_487-1491911889:75577..76078 | Clytia hemisphaerica | exon |
| TCONS_00068692-exon-scaffold_487-1510915933:75577..76078 | TCONS_00068692-exon-scaffold_487-1510915933:75577..76078 | Clytia hemisphaerica | exon |
| TCONS_00068692-exon-scaffold_487-1575043694:75577..76078 | TCONS_00068692-exon-scaffold_487-1575043694:75577..76078 | Clytia hemisphaerica | exon |
| TCONS_00068692-exon-scaffold_487-1491911889:78532..81394 | TCONS_00068692-exon-scaffold_487-1491911889:78532..81394 | Clytia hemisphaerica | exon |
| TCONS_00068692-exon-scaffold_487-1510915933:78532..81394 | TCONS_00068692-exon-scaffold_487-1510915933:78532..81394 | Clytia hemisphaerica | exon |
| TCONS_00068692-exon-scaffold_487-1575043694:78532..81394 | TCONS_00068692-exon-scaffold_487-1575043694:78532..81394 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_487 | supercontig | scaffold_487:75577..81394 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001991 | Na-dicarboxylate_symporter |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0015293 | symporter activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0015293 |
symporter activity |
Blast
BLAST of TCONS_00068692 vs. Swiss-Prot (Human)
Match: EAA2 (Excitatory amino acid transporter 2 OS=Homo sapiens GN=SLC1A2 PE=1 SV=2) HSP 1 Score: 392.119 bits (1006), Expect = 1.759e-122 Identity = 219/449 (48.78%), Postives = 300/449 (66.82%), Query Frame = 3
Query: 762 ELDQPVQANVLLFVGFPGEIFTRMLKMLVLPLIITSLIIGFADLDHESSKKIGRRALLYYSFTTCMAVVLGLILVYSISPGKYGNEKQFK--DDVDQTRIMDTILDLIRNMFPENIVQACLETAVTRAKEV----PKHTAYNSTR------NDTITN----KTVLISGETTYESGTNILGIVVFSIVIGVLLGKMGSQAQTFIECTRIFNDLTMKLVEYAMWYSPIGILSLVINKFASMKDTSGEFQRLGCYLGTVISGLALHSLIVLPLAYFVMTRRNPFTFIKGTFKXXXXXXXXXXXXXXXPVTFKCLEDNNGLDNRVTRTVLPIGATINMDGSALYEAVAAIFMAQSIGMTLDIGEYATISCVSILASIGAAGIPQGDLVTLFVVLQAVGLPEEAITLILSVDWFLDRIRTSVNVLGDCIGAGIVAHRSEGDLPQIHAPLEAFEN 2060
L P+ +V++ + FPG+I RMLKML+LPLII+SLI G + LD ++S ++G RA++YY TT +A VLG+ILV +I PG +KQ D+ +D LDLIRN+FPEN+VQAC + T K+V P N+T N+T+T ++I ++ G N+LG++ F I G+ +GKMG QA+ ++ I N++ MKLV MWYSP+GI L+ K ++KD ++LG Y+ TVI GL +H I LPL YFV+TR+NPF+F G F+A +TA T+SS+ TLPVTF+CLE+N G+D RVTR VLP+GATINMDG+ALYEAVAAIF+AQ G+ LD G+ T+S + LAS+GAA IP LVT+ ++L AVGLP E I+L+++VDW LDR+RTSVNV+GD GAGIV H S+ +L I + E+
Sbjct: 65 RLASPIHPDVVMLIAFPGDILMRMLKMLILPLIISSLITGLSGLDAKASGRLGTRAMVYYMSTTIIAAVLGVILVLAIHPGNPKLKKQLGPGKKNDEVSSLDAFLDLIRNLFPENLVQACFQQIQTVTKKVLVAPPPDEEANATSAVVSLLNETVTEVPEETKMVIKKGLEFKDGMNVLGLIGFFIAFGIAMGKMGDQAKLMVDFFNILNEIVMKLVIMIMWYSPLGIACLICGKIIAIKDLEVVARQLGMYMVTVIIGLIIHGGIFLPLIYFVVTRKNPFSFFAGIFQAWITALGTASSAGTLPVTFRCLEENLGIDKRVTRFVLPVGATINMDGTALYEAVAAIFIAQMNGVVLDGGQIVTVSLTATLASVGAASIPSAGLVTMLLILTAVGLPTEDISLLVAVDWLLDRMRTSVNVVGDSFGAGIVYHLSKSELDTIDSQHRVHED 513
The following BLAST results are available for this feature:
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