TCONS_00068685 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068685
Unique NameTCONS_00068685
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4541

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068685 ID=TCONS_00068685|Name=TCONS_00068685|organism=Clytia hemisphaerica|type=transcript|length=4541bp
AAGGATAGTAAAAAATACAagAAAGTGTCGGTGACATCGAGCAGTAGCGA
AGCTGAAGAAGAATATTTCAACGAAACCGAcaacgaagatgaaaaacatG
CCGGCAAtcccaaaacaacaaaatacagcGAAAAACTAAAAGAAATGATC
GCACCCATGTCAACTAAATTCAACCTACACAAAGAATATAAAAAACTTGA
ATACCTGTGTGCTTTCTTTGCTTGCGCGTCACACCGTACGAACGTTATCT
TACGTTCGCTAGGTGCGTTATCATGGCTTGCTAGCGTCGTTATTCATTTT
GCCTTCGACGTTAACGAGGCCATAAAAGTCTACGGCTACACCTTCTTAGC
AGCGCAGTTCTTCTGGTTGTTGAACTTCGTGGTTGGCACCCTAGCTATGC
GTTATCGTGTGTTACCATGGTTACTCGAAGGAATGAAAGAATTAAGACAC
GATGAATGTTATGAAAAAACAATCACAAATGTGCTCAGAATGGTTAAGaa
aattccGTATTGGGTTCTCGCGTTCGGATTTGTCGGCTCTGGTGCCCAAC
ACCTTTTCTTATATATCGATGATGCGTTTAACGGTTCCTACAATTCATGG
ATGGAATCTAAAATCGTGGCCTCAATACTCTTGATCGTACGTTTCGTAAC
AGCCGCTCATATTTACAGCGCTTACCTGTTGTTTTGGATGGGTCCAACTG
CGGTAATGATGGCGTGTGGTTACGCTATGTCCGAGTTCTTAGATCAATTC
GATGCAAAGATTCGAGACACAAACCGAATAACATCATTCAAAGAAGCCAT
CTCGTTGTATTCAAAACGCGCCAAATTCGTCAAAACCTCTTCCTCCAAGT
GTTTAGTTATCTTATCCATGCAATTACTATCTGTCGTCATTTGTTTTGGT
TTAAACACATACGTCTTCTTATTCTCGCCTGTTAGAAGATATTTGCATGT
TTGGCACTCCATTGTCCCACTACTCATCATGGTTTACCCACTATGCACTG
CGGCATGGGTTACTAAACAGTACACTTGGTTTATTATAGTTGTTGTACGA
GCTTGGGTGCATCGTGACGATTTAGATTCATCATCCAGTGATGAAGATTC
AGGAATTGATGAAATGAAAACGAGTCAAGATAAAAAGACATTCGCAGGGA
AAAGTCCTTTCTTCTCTAAAAAGAAACTAGACGAGTCTATTAGTTCTTCA
GTTGCTGGCATCTTCAAAAGCGGCCGCCCAAAGTCTGCGCATTTCGATTC
GCAACGGAAACTGTCTGGATTCAGGCGATCATCAAGTGTACAAATTAAGG
ACCGTAATAAAAGGAAATCAACGCAAAATCTCATGCCTTGGCAGAAAGCA
GTAGCTGAGAAACAACTTTCTGATCCGGGAAATATCGTTGGCTCGACTAC
CTCAATAAACAGTGTGCCTCGATTTGCTTCAACCGTTGCTGCGGCAACTG
CTATAAACAAATTTAAGAATGTAAAAAACAGACCGAGATTCAATTTCGAg
aaatttttatcttatttagagAGCATGCGTAGTGTGGTTGGGTTCTCCAT
CTCAGGGATTATGGTCACGTGGGACTTGGTCTCCACCACactgtttttat
tgttttccaTCATAGCTGTTTTCATGCAGGAATCAATCTTTGGCGATCAA
AAAAGTACGTTGACTTCTTGATCTGACTACAACATAAGACCCTGTCCACA
CGTTGCATGGTGTGAATCCTTTTGAAGACAATGGAATCATTCAAATTGGC
GTGTTTGGGATTGAttttatttatcttatttttatttataaaaccgATAT
CGTGTGCTAAATGTAAATCCAGCCCAATTTTTTGGAACAGCGCGATTAAG
AGTTATTAATTGCATCCAAACACTACCTCTTTGAGCTTTGGCCCACTGGG
CCTTTTTCCTTAATCTAGTGCTGTAAAATAAGTCGACATTTCAAAATTGG
ACTAAGTATTGATCCTGTTTTTGTGGAATTTGCTACTGTGTGCTACTACC
attggataccccttaaaatcacataccccttaaaacctacaaagttgcAC
TTTGGGCTCTCTTAGccaccaaacttaatttaataGTATAATTCACTTTT
CTACTACCTGTTATAAATTTgctttcataaaatacctaatttcgAGAATT
CAATTATCGCGAAGTATcgtaaaattcgaagttatttgaaaattcaagtt
tTTCGAACCTAGAGATTGCACAATTGAGTTTATAGTCATAAAACCGATAC
TTTTTAGGTACCTATttatggtaggtatgaaaaaaatcattttcttcttc
atgatTAGACTCAACCGAAATCGTAAGGCCCTGAAAGTTCTATTTCAAGG
CTCATTATAGTAGTGGCCAATAAAATCTggaaatcgactttctcaaaacc
tggtcattctgtataccaaaatgtcacaaattcgatggagatttagaaaa
acattagtaccatacgtcaaaaatgaagttaataaaagttttgaccctTC
AAGGtcgttttttgaagaaaaaaacaagtgCAATTGTATTATGGgtatga
aatcctgaaaaatacaaatacacgttttttttttataagaacaaactata
taagaacataaggcttcgagcccaaaaatttaagaacattctaagaacat
actaaggctttggagacttaaaaacatgcaatttcttaagaaattacatc
aaaatgctcaaaaaatgctgaaaataagaaaattttaagaacatttttag
gcttcaaattcaaaaaactaagaacatccgaaggcttcgaaaattttcga
tgttcttataaaaaaaaacgtgtattgtttTTGGAATGGATTTCcagcaa
gtatttgatcaattgaatcacggTTTAGCACCTGGATTGCAATTTCACAG
TCTCAGTATGTTGTGAGTAAGGGGTcaatgtttgtaggttttaagatGTA
ATAGTGAAGATTTTAAggcatattttgattttaacgtacagttttgaaaG
TATTTAGGTACCAATGATCCAATTGTAACGGtagtaactttgcagtgaat
cactgtataaaattttagaccaaacggactattttataaaaagttattcg
agaaaaaccattttgtcaaaaggacattttttcatgaaaaactgaaaact
ggttTCTACGAAACATCACTACTAGGGAAGAAAACCATTGACagcgtact
ttcaacacaaaaagtttcagcctcaaatTCCACCTAAATTTTCAGATAGA
GGGTACCTCTATTACTTGTAGGTTTAAGGGGTACCCACTGGTATAGTTTC
GAGAGATAAATACAAAGTCTAAACTTATCTAGCATATTTATATGGCAGGG
CATAACCCTATGAATGTGAAAAAACATGGGTCAATAAACTTAAAATAAAT
TGTagatatttttttagaaataattatttaacataatttaaagtttgata
tgaaagaattttttcatCCCTATCCTCGAAACAAAACTTCTACTCGTAAG
TTCAATGTCGCAAGTTTTGTTCTGTTTGACgaagaattttattatttttg
ttaacTGGATATTGTCAAGAGCCAGATCAAAGCTTTACAAGTGTTTGCGG
CTTCTTAGtgaaaaataacttttctgCTGCTTCATATAATAAGCTCTCCT
CCATTCCGTCATACAGTCAGTCTAATTGACATCAATGTTCCTTGTTTACA
TACAATGACGTATGACTAAAAAAACACATTGACCTTCTTAGCTTCAACAA
AACTTAACCACGAGTTGCCGATTTCATTTAGGTTTCATGATTACCAAAAA
TTACACCGTGGAACACAGAACCACAATTCATGATATCCACGAGGTAATGT
TTTTAAGGAAACACCTCGGTTTTTTCCAGTAGTGGCAAACTTTGAACGGA
AAAGAACGGGGAGTTTCcgtagaagaaaaaaatattgcgtCATGAATATC
ACAAATACAACTTGCTTCTCTAATGAATGGAATGATGATGCCAATACATA
AATTCGCTGGTTGGTGAACTCACATGTCAATGCAACATAATAATGTAGAC
AGGCTAGCCACAAGTTCAGCATCCAATGTCCATTCTATGGTTTTATTCGG
TTCAACAAATGAATCACCATCAAACTTGGTAAAGGTCTAACTtattcttt
gatgtaccattgtctcattttaatgattttaaatCCAAAAGCTGTGAAGA
CTTCTTCTTCCGTAGATCTTGAATACCTTCCAATTGGAGATTCCTTCTCG
TTCAACCAGAGCCCTCTTCCATCCAGATATCACTTTCCATTCAACTTGGT
AAAGGTTCCATGCTTGTTTTGATATCATGATCTCTCTGTAAAACTTCATT
ATTGTTCAATAGCCTTTTCCTCCTTTTGTAAAACTTATACACGATATAAA
CTCCAACACCAAGAATGAACAAGATGACAATTCCAACGATTACAAAAGCG
ATCTTGGTTTCACTTCGCGTTGCATCTCCTGTTAATGATGGATCTTCAGA
TTCTGATGAGCTACTCATTTTCTTTCAATACTTGATGATCT
Run BLAST on NCBI

transcript from alignment at scaffold_487:23595..40623+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068685 ID=TCONS_00068685|Name=TCONS_00068685|organism=Clytia hemisphaerica|type=transcript|length=17029bp|location=Sequence derived from alignment at scaffold_487:23595..40623+ (Clytia hemisphaerica)
AAGGATAGTAAAAAATACAaggtaatgtttatttttccattttgtttatt
ttataggGCTTTCTTAAGTCAAAAATCTCTAGATTAAGCTGTGGTTGGTC
CTAATAGGGTGACGTGAGTTTTCTCTCAGATATTTGACTTTGATAATTGT
GATTTTTCCTGTGGCATTTGTTAGTTGTAGTTTTGAGCAGTCACTGTTTT
ACGTATTTGTGATTCTTTGAGCTATCAGTATTTGGTTTTAATAAGATAAT
AAAGACGCAGTTTGTATTTGGAACCATTTTTATGGTCTACTGTGGCATTT
AAAGTTTGATTACAGCAATTGTAATTAAACTCCTTCCTTTTGAGTCCAAA
AGCAATTCTTTTTGGAGGCTGTATTTGTTCAAAGTTGGATTGAAAAGGAA
AGGAATTTTGGATTTCAAGAAATTCTGATGGAAATTGGAATCCATATAAC
ACTTTGGTCGATAAAGAGAaacagaaaataatttttgtcgaAAAGTCTTG
TTTGATGAAAGATATTGCGCGGTGATTTGGGAGAAATCTCTAAGAAATGA
TGGATCATAACGATAAAGTTAAAATGTGGCGTTTGCTCGTCGAGCGTGCT
GCTCTGAAGAGGGCTTACAAGCAGGTATTTTAAATCTATCTTTCACTTTC
AAAAGTAGTTTTATCTCCGTCTCAAAAATAAATTGTTAAATATCATATTC
TACATactgtaaaaatgaaaaaggtttatcgttagtgtagcctggatatc
caggcggTAAAATTTTTTAGATGCTTTATATTTCTGGTTTACGGCCTCTT
CCTAAAGCGAATGCAGTGCACTTGATTGCGCTCGATCCGTTAAAGCTGTA
GAGTGTGATCTATATGACGAGGAGAAACTCCCTTgcaaaaatacatgttt
tttcttttacaagcataacgtttataggcatatgcaggctcagttttggg
tacctaaacaatagaatgttaagcataatgcgagcccgatataggggcag
acacttgcatataaaaaaaacatgtagggcAGTGGCTCccacttgctagt
gaagataaagctgttacatgaaaacatgaaaaagaagaaacaaagaGGAT
AGAggatcattttcaaaaataaacatGGTCGGTCATGGTGATGCATTCAC
ACTTTGTtgtggactttggtgtaattttTGGATGCTTGAAATGTCTTGAG
AACTTGCCAGGCTGCTTTTTCTACATTTCTGTATTGTTGCGTTTGGTGGG
TACACTTTCATACTCTAGGGTGACCAAGCTGTAATTTCAGAGTTTTGTAT
GTTGAGATTTTACTTCCACTGAAACTTATAACTCGGATATCAAGTCTAGG
TTAGGGGGAGTAATAGACTAACCGTTGAGTTTAAaggccgaagggctaga
gtagaatctctaacctttcccaggcaaaaGAAAGTGAAGCcaattatttc
ccatccaaaacgcgcctagaacgcgtcgcaatcatgacgacggattgtat
ctagcggtaactttgttttgaggactgtatcttttgaaatctagcgatag
attttagtttctatccggcgtttgtgtgaaacaacgcgcgggcgttctgg
atgggaaataagtggtttcatttcccatccaggagtctcgagtctagccc
ttcgggcttggaagacTAGACTAGCACGCGTCTGCCTTTCCTGAACCACA
AAAACGAAATACTActtataaagagttcttatacaGAAAATTAAATTACC
GCTGGAGAGTGGTTTCGAAAGTATTCAGGCGAAAGTTTAGTAAGTCCAAT
GCAAGCGTAAGCTGCCGTGAAATACAGCGACGTGGTTTCCTAGTCTACTG
AGGTCTTGttaaaagttttcagaagataattgattgatttaattgaCATC
AAATTTACTCCTAATTATTTTGCTGCTCTGTGTCTTTTTTCGATTATCta
caacaaaatttaaaattgttaGTTTCAATTCCAAAGGGACatagaatatt
taaaaaaaactcattgaatgtttttcacaattttccttgaaacatcacct
tttgagtttttttcgaCTGGTTTTGTATATTGTTTGAGAACTATTAATAA
AATCGAATCGAAATTTTCAAGAGTTCTTCTTTGAATAAGTGGAATTAAGT
TAGGAATCATCAATCATGCCACAAGTGGCTTTAAGAAATAGACTGAGTCC
GCAACTACTTGTGCGCACTCGTTCGTGTTCGCCTTCACATTCGCCCGCCG
TACAACGCTTGAACAGTCACGCGATAAGTCGCTACCAACGAAAGATTGTA
AAACGTCAACGGCAACGGAAATTAGCGGTTTTAAAGGTAAGGTTACAGTA
TCCATATAGATGTACGTTTTTTTCCCATCCAATACAAATCTTTTCAAACT
TTCCGATGCAACATATTTGGTTGCCGAGGGCTTTCGTGTAAATAAGTCTT
TGAGCAAAATTGTACGTACGCACGCTGAAGATAAGATTCTAAAATATGAT
TTGGAACATGTTGTAGAATAAAACTTTCAAACGCTCCTATAACgttctat
atttttcaaatctctTACACGCCTTCTTATAGGAACAGTTCCATAAGCAT
GAGAACACGAGGCTGGAAATTGGCCAAACCCTAGAACAAATTatgaacaa
tctgagcctcagatttcagaagtTTCTAAGAAAGTACTGAATTTAACGGA
TTTAACAGATGTAGACCGATTTTAAGTTTTAAGACTGGCTCCGGTAATAG
TATATACTATATagcataaaaaattttttttttaagttttaatgaaaatc
ttatATATAATTCCAGCCCAATTTTGGTCGGGTTACGCGTGGTGCTCATT
TGGTTCAGCTGTCAGAAGTGTGGTTTGTTTTCTTCCGTGTTTTGATGGac
tttattttttcagaatAGTTTTTCTCTGCGATGTTGTGAAGTTGtgaata
tcaaaaaaatttcagaaaatatttaaattttaaggattattaaaaagaat
tgtAATGAAAAACTCCTCCCGTCCCAATTTTCACGCTAATCAGAAGTGTG
GAATtatccattttttgtttttttttaatgtttttcatttttactcACTC
ATTTATTATAACATTGTGAGTATTTGAAGATCAGAAGCCGAGGACTTgaa
gattgaaattttttttgacgattAGTATTCGAGACATTAGAAGCATGTCT
CAGCTCCAGCCTTCAACGAGTAAATTAGGTCCTCGTTATGTAATCAGGAG
ACTAAGTCCGCGCATCTGTGGGATCCGCGGCCGCTCTCATCCGCCCGCGC
ACCGCCTGGATAGTCGAGGGATGAGCCGGTACCGAAGGAAACAAATGAAA
CGCCAACGTCAGCGCAAATTCGGCGTTGTAAAGGTGAGAAAAAGTGGTTT
GTAAACAAACCGGGGATATAGAAAATAAGGTTgtgtctacacgttttttt
ttataatatatatataNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTAGTCACAAGTTTGCATATTGTTGACCCTATGC
TGATCCCTCTATATTTTGAGGGGTCTTGTTTGGAACCTTTATTTTTCCAA
AGAGTTTTAAGGCGCGAGTTGCTCCATGTTTCTGGGATATCATTATTCAT
CCATAGGTTTGTTGTAATATGGTGCATTATTTGTGATAAGATGGGATCAT
CGCATAGTTTTAGAAGTTCAGTATCTACGTCATTATTAGCCTTATTGTTT
TTTAAGCTGGCGATTTGTTTTTGGATTTCTTCAATAGTGGGTGGGCTGTC
TTCAATATCTGTGTTTGCTGATATNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
tttccccccccccccccccgaccaAGGAGATAGAAATACGACAAATATGT
ATTTTCTAAGCTCCCCAGTTATATAATTTGATCAAAGTATGATGTACTGC
TCGCGCTACAATATAAGAAACCATAGATATCATGCAGTTTGTTAAACGGA
TTATAGATCGTCATTATTTTTATGTATTTGGTAAAAAATTCACATATGAA
TTTGTTATTAATATGTGTGCTTGAAGCTGCTATTAGTTCAGATTTCTTAT
CAAATTGGCGAAAAGTTGTGATTTCTCAATGCACATTTGTACTGTTAATT
TCTAACGTACCTGAACATCATATTATTAGTACTATCAACGGCTTTAAAGA
CGCAGTAGATCTTAGGGCAACACTAACGAGAAATTTATTGTTCCTTACAC
TACCAACAAACTTTCCTGATCGGAGCATACattatttccattgtttcttt
aTCGATTGAAAGGTTTTCGAGCCAAATTATGTTTTGTGGCTTGTTTGTTT
TGAGTACTTCTTAGCTTTTACAAAGATTTATCGCTAGAAACCATCTTGTC
CTTTGATAGAGGGCTTTAGTACTGCATAAACGAacattgattttgttttc
cGATTTGTTTGGGGAAGAGTCAAAAACAAACTGAGAAGACATTTTTAAAC
CTGCAGACAAGAATCTTTGTTTACATCTACCCTTGGCATTGTAAAACCAT
CATTAGAGATCACCACTTTGGATCTCTAATTCAAATTGAGAGTGCTTGTA
AAATTTCCCTTAGATTGTAGCGTTTTCAATACTACAAGAACGTTTTCGGG
TGAAGAAGCATGAAATTTTTGAGAACTAATCGCCCTCTTGTTACCATCGC
GGAAATAAATTCTTTGGACACGCATAAGATTCAACAAGAATCCAAAAGTG
AAAAGGTATAATttgtattttgtaaaaatttcacttttgtaAAATTGCCT
CGATATTTTCTCAAGGAACGTCGTTTGAAATTAATGATAATTTTGTAATT
TCgtgaaaaatctttgatcattTTGTATTTCTAAAGTCTTTGacaatgtt
tcatttttcaaaagaatcgtttattgttttgatgttcgTTTTTCAAATGA
AATCTTTCTCACATAATTTTGTAAATCTCAAAGATAACCTTAACAGATCT
TTTATTATTGTTTCTTTcccaagaaaaatatttgaaaattttatttttct
gaagGAAGATCTTAAAGCCTCTTGTATCTTTGACACtgttgtatttttca
aggaaaatctaTTTTTGTTTCTCCCTGGCCCTCTCAGTTTCTCATGGAAA
ATGTTTGACGATGTTGTATTTCTAAAGGAAAAAGTTTGACGATGTTGTAT
TTCTAAAGGAAAATCTTTTATCATTTTGAGACTCCAAGGAACAATATTAT
GCAAGGTATAATTTTTTAATGGAAACCTTTGATCATATAGTTTTGGTTAT
GTCTTCAGCCAAAACGAATAGTGTCTAAGATGTCATAAAAAGAGCAAACT
CTTAGCTATCAAAGGAGATCTGAACCCTATTCTAAAACTATCCAAGCCTA
TTTATTCCCTACTCTCATCCAATTCGATCAATGATTAGATTTACCAACCa
gatacagcacctgaccccgagaatgtagtaaaccccgagaatgtaggttt
ctcattttttagcattgtagccctaacgatagttcaacttcataaaaatt
tgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNatcaacattttactattactagatttaaagccataaaacca
aacctacattctgggggctataacgaaaatgggagtcaacttcaaggacc
aaaaaaattggtgtatctatcaaaagtaatgaaactaacccctgggaaag
gattttgggagttcaaaatttcgttgaaaatatttaatatcttttaaaat
gcaaatctaTATCTTTCacgtctgattcaaatttcacctacattctcggg
gtcaggtgctgtacctTTTCACACAAAACTTGTCCTGAtcattttttgat
gaatttagTCCTCTGTGACGTCACTATTAGGTTCTGTTTATCTTTATAAT
AGACAGGGGGTCAGTGAGTTTGTTTAACTTATCTCCTCATGTTTTCTTGT
TTCATTATTCATGAAAATTGTTCttgtttataagaataatgTTTTGATGA
TGAACAATATTTCTTATAAGAACTTGATTAAGCATTAAATATTCCAATCA
TTAAATAAAGCGGGGATTAGCTCCGAATTTAAATCTAGGATCGTAattat
attcaaaatgaaatgtACCCTCTAGCTAGTTTAAGAAATAGATGGCTTAT
AAGTATTTTAGCCGGAAAGGACTTTTTTCTATAACAACGTTGGCTAAAAT
TGtacatttctaaaattttatgaGACTGAGTTTACAAATTAGATTAAGAG
TATTTTTGGAGGACTAAAattatgatgttcttataagTAAGTGTTTCATT
TCCAATCGACGACAAGGATGGAAAATAAAGTAGATGAATAAGTTGTTCAA
GCAGAAGGAAATTACTCCATTTTTATTCAACCAAGACTGGTGAATCGatc
gaaaaagtttttcacgaaatttgagcaattttatgttcattttgatttga
tcgaGACTTCATTTTCTCTAATGAtgaatattttggaaaattcaagTTCT
CATCTATTTTGAGCACAAGGTTTTTCTCAGGAGGAGGAGGAGCTCAAAGG
CTAATGTTTTAGTTTGTGtgaacaaattttatttgagttgtgattttctt
ttttggaatttcttAAAGAGAATTTGTAATCATTTTTGTTCTTGTACAAA
ATGAGTTGTGTTTGTTCCTTGTTTTGCCGCACCAATGTAAGTATTTAGCG
TCCGAAAGTAGAGTGTCTGTGAAAGAGGCCAAATGAAATTTCGATTATAG
TGACTTTTCGCCTTTGAGGTTGTTTCTATCTTCTTCATATCCACTAGCTT
CATGTGACCGAGAgaaattgtttgattttttcaagTTGTTGTAAAAGTTG
TTGTTTTTACGTTGATATGGTTAAATAAAAGCTAAATAAAATGTCTCAAG
AATGATCTATTTTCCTTCCACAATCAAAGCTTAATCTATAACGGTTGTTG
AAATTAAGGGATCAAAATAATACGTGATTCTTAGGATTAATATTGTTGAC
CTGCAAACGAAGACTCCCTTTAAAAcgagttcttataaaacataCTTTAA
ATCAAGTCAGTTATATTAAAACCCAAGGAAAGGTAAGTATGGCTCTTCCA
TTAGAATCTTTGTCTTTTGAAAAGCTTTCTCTGCAATTGGCTACACCAGA
TTCCTTCATTTCCATCGtaaaactcaaatcaaaagCCTCCTTGTAAGGAT
CGGGTTTAAACTTTCGTTCATACATTTTGGAAACTTCAGTTCTCCATTCT
ATCCCCTTTCAACAGTTTATATAGCAACATAAACATCAACTACTTTCCTT
CTTCTTATCTTCAGAAAGTGTCGGTGACATCGAGCAGTAGCGAAGCTGAA
GAAGAATATTTCAACGAAACCGAcaacgaagatgaaaaacatGCCGGCAA
tcccaaaacaacaaaatacagcGAAAAACTAAAAGAAATGATCGCACCCA
TGTCAACTAAATTCAACCTACACAAAGAATATAAAAAACTTGAATACCTG
TGTGCTTTCTTTGCTTGCGCGTCACACCGTACGAACGTTATCTTACGTTC
GCTAGGTGCGTTATCATGGCTTGCTAGCGTCGTTATTCATTTTGCCTTCG
ACGTTAACGAGGCCATAAAAGTCTACGGCTACACCTTCTTAGCAGCGCAG
TTCTTCTGGTTGTTGAACTTCGTGGTTGGCACCCTAGCTATGCGTTATCG
TGTGTTACCATGGTTACTCGAAGGAATGAAAGAATTAAGACACGATGAAT
GTTATGAAAAAACAATCACAAATGTGCTCAGAATGGTTAAGGTATTACGG
TTCTTTACCTAATTCGTTTGCGCGTTTTACCCTCTTAAAACTATAATCCT
GTGAACCTTGGAAATACATAGCCGAAATCATCCACTGTATTTTTGCCTGT
GCTGTCTGTCCATGCTCATACTCGAGATAATGAAAACTCaaatagttgta
ataaaattgttgatgaaaatttgatatctgGAAGCAACCCAATATTTAGT
TAAGGTCGATGACCATGTACTTTTTCAATTCTTATTTTTAATAACGTTCG
GCGTAACCTTTAGACATTTTAGGTGAAAGACATTcatgtattttgttttt
cttagaaaattccGTATTGGGTTCTCGCGTTCGGATTTGTCGGCTCTGGT
GCCCAACACCTTTTCTTATATATCGATGATGCGTTTAACGGTTCCTACAA
TTCATGGATGGAATCTAAAATCGTGGCCTCAATACTCTTGATCGTACGTT
TCGTAACAGCCGCTCATATTTACAGCGCTTACCTGTTGTTTTGGATGGGT
CCAACTGCGGTAATGATGGCGTGTGGTTACGCTATGTCCGAGTTCTTAGG
TAAGGTGACTTCCGTTCAAATCTGGATTAAGGGCTAGAATGGGCATCTAG
TACTTTTGATTAGAAGAGATTGTCAGTCGTTTCGGAAAAAAGATGGAACT
GTAGAGCAAAGGCAATCAGAACTTACCTATTCTACATAAAATTGGGAAAC
TTTTGATTTGTAATATGTCCagtactaccttaagggaacttattttggcg
ggaactaattttgacgagcggTAAAAATCCTGGAAATTTTGCcgattgat
gaatttttttaattttgccgggAACTAATTTcggcgaattttgtctaaat
ttgccgaattcgccaaaattagttcccgtcaaaataagttctcttAAGGT
AGTAAGCTCGTTGAGTCAGCTCCTGGACTACAATGGCTTCaattaccagt
ggataccccttaaaacctacaacaaaaaaggtaccccctatatcctgata
aagaaaacagtaagggctgaaactttttctggtgAGTCTAGGCTATCTAT
GAGCTTCTTCCCCGGGTATGGTTTTTTGTAGAAGCTGCTAAGAAAATCTT
TATTGCTTtgtgaaaaaatgcaattttagctatttaccccttaaaaccta
caaaatggttttcttgaataactttttatagaatAGTCCTTTtagtctca
aattttgaacactgCAAAGTAAGTAATGGTACATTTAGATCATTGGTacc
ttaaaatttttgaaacgttactaatgtttttctaaatctccatcaaattt
gtgatattttggtatgcaatatgaCCAAGTTTGAGAAActcgattttcaa
attttattggcCATTACcataaatgagctttaaaatagaattttgaGGGC
CTTACAATTTCTTTGGGGTGCAACCAtggagaagaaaatgattttttcgt
atctaccataagtataggtacctaaaagtataggttttatgaccttaaat
tgatttgtgtaatctctaggtccgaaaaacttgattttttgaagggattt
ttgataaagttttcaataacttcgaattttacgACATTTTGCGATAATTA
GAATTATTGAAATGAGATATTTTATGAAAGTACCTATATTAgagattgta
aaaaagtgaattatacaatattaGATTAAGTTTGGTGATTAAGAGAGCCT
AAAACccaactttgtaggttttaaggggtatgtggttttaaggggtatcc
actggtatatGATCAATTCAGAAATTCGAAAGAAAAAACTAGGAAAAAGT
CAGTAATTTCCTGTAAAAAACATTTGGTACAACCTTACTACTGTTTATCT
CTATTAAGTAATCAATTAACCAACTTCGTTGCCGTGTATccaaggcttta
tttacgttactgatacGCATCAgtgaataccctggtgttggctggtGCCA
GTCTCCCCTCTCAAAGAAGGTAGACTATTCACAAAACAATTCTCGGATAT
TATCTGGTTCTGTTTGTAAGCGTCAAAAAGCCGATTATAAACAGGAAACG
ATGTTGGATATCAACGACAAATCTTTCAATCAATTCCATTATAGATCAAT
TCGATGCAAAGATTCGAGACACAAACCGAATAACATCATTCAAAGAAGCC
ATCTCGTTGTATTCAAAACGCGCCAAATTCGTCAAAACCTCTTCCTCCAA
GTGTTTAGTATGTGTCATTTCATTATTAATTATTTTCGAACAGATTTAGG
GGAAATGAAAGATTTGATCTTGTGTCCTTTGGAAGATAATTTAGTAGGAA
TTTAGTTTAGGGGATGGCTAATTTTTCATAGGGGGTTTAACTTGAAAGAA
GGctggaaaattttattttggagAGGATTGATATGGCAGCTGCTTGACCT
TTTTTTGGACATTCGAAGTAGATCAGGTAATGAAATTAGGTAATAGAGGG
GGAATACTGTCTATCGTAAACAACTTGCTTTTTGATGTTATAGCTGAAAA
AAGTGTTCTTTACATAGTTTGTAGGTTTAAcaagatttccaaaatttagA
CTACCAGTAGGGTTAAAACCACGGATCATTATTGATAAGCTAGTGAAATT
ATACTGAAATTTAGCCTTAAGTTTTAAGTTCAAGtcttaagtttttcttt
tctttctacaACAGGTTATCTTATCCATGCAATTACTATCTGTCGTCATT
TGTTTTGGTTTAAACACATACGTCTTCTTATTCTCGCCTGTTAGAAGATA
TTTGCATGTTTGGCACTCCATTGTCCCACTACTCATCATGGTTTACCCAC
TATGCACTGCGGCATGGGTTACTAAACAGTACACTTGGTAAGTTGTTGAT
TTTGTTTCTTATTTATATAAAACTTTAAACTGTGTAGAAGATTTTAAATT
TAGGTTTAAGTTCAAAAAGCTGTAAATCTAAGGAATAAGAAAAAAGCTAA
AGGAACTAGTTTGTTACTTATCACATAAGGATGAATGTTCTTGGGTTCTT
CCTGAAAACAACCTTTGTCTGAAGGAATTGACTACAGTATAACGATTTTT
CTTCCTTTCGTTCCAGGTTTATTATAGTTGTTGTACGAGCTTGGGTGCAT
CGTGACGATTTAGATTCATCATCCAGTGATGAAGATTCAGGAATTGATGA
AATGAAAACGAGTCAAGATAAAAAGACATTCGCAGGGAAAAGTCCTTTCT
TCTCTAAAAAGAAACTAGACGAGTCTATTAGTTCTTCAGTTGCTGGCATC
TTCAAAAGCGGCCGCCCAAAGTCTGCGCATTTCGATTCGCAACGGAAACT
GTCTGGATTCAGGCGATCATCAAGTGTACAAATTAAGGACCGTAATAAAA
GGAAATCAACGCAAAATCTCATGCCTTGGCAGAAAGCAGTAGCTGAGAAA
CAACTTTCTGATCCGGGAAATATCGTTGGCTCGACTACCTCAATAAACAG
TGTGCCTCGATTTGCTTCAACCGTTGCTGCGGCAACTGCTATAAACAAAT
TTAAGAATGTAAAAAACAGACCGAGATTCAATTTCGAgaaatttttatct
tatttagagAGCATGCGTAGTGTGGTTGGGTTCTCCATCTCAGGGATTAT
GGTCACGTGGGACTTGGTCTCCACCACactgtttttattgttttccaTCA
TAGCTGTTTTCATGCAGGAATCAATCTTTGGCGATCAAAAAAGTACGTTG
ACTTCTTGATCTGACTACAACATAAGACCCTGTCCACACGTTGCATGGTG
TGAATCCTTTTGAAGACAATGGAATCATTCAAATTGGCGTGTTTGGGATT
GAttttatttatcttatttttatttataaaaccgATATCGTGTGCTAAAT
GTAAATCCAGCCCAATTTTTTGGAACAGCGCGATTAAGAGTTATTAATTG
CATCCAAACACTACCTCTTTGAGCTTTGGCCCACTGGGCCTTTTTCCTTA
ATCTAGTGCTGTAAAATAAGTCGACATTTCAAAATTGGACTAAGTATTGA
TCCTGTTTTTGTGGAATTTGCTACTGTGTGCTACTACCattggatacccc
ttaaaatcacataccccttaaaacctacaaagttgcACTTTGGGCTCTCT
TAGccaccaaacttaatttaataGTATAATTCACTTTTCTACTACCTGTT
ATAAATTTgctttcataaaatacctaatttcgAGAATTCAATTATCGCGA
AGTATcgtaaaattcgaagttatttgaaaattcaagtttTTCGAACCTAG
AGATTGCACAATTGAGTTTATAGTCATAAAACCGATACTTTTTAGGTACC
TATttatggtaggtatgaaaaaaatcattttcttcttcatgatTAGACTC
AACCGAAATCGTAAGGCCCTGAAAGTTCTATTTCAAGGCTCATTATAGTA
GTGGCCAATAAAATCTggaaatcgactttctcaaaacctggtcattctgt
ataccaaaatgtcacaaattcgatggagatttagaaaaacattagtacca
tacgtcaaaaatgaagttaataaaagttttgaccctTCAAGGtcgttttt
tgaagaaaaaaacaagtgCAATTGTATTATGGgtatgaaatcctgaaaaa
tacaaatacacgttttttttttataagaacaaactatataagaacataag
gcttcgagcccaaaaatttaagaacattctaagaacatactaaggctttg
gagacttaaaaacatgcaatttcttaagaaattacatcaaaatgctcaaa
aaatgctgaaaataagaaaattttaagaacatttttaggcttcaaattca
aaaaactaagaacatccgaaggcttcgaaaattttcgatgttcttataaa
aaaaaacgtgtattgtttTTGGAATGGATTTCcagcaagtatttgatcaa
ttgaatcacggTTTAGCACCTGGATTGCAATTTCACAGTCTCAGTATGTT
GTGAGTAAGGGGTcaatgtttgtaggttttaagatGTAATAGTGAAGATT
TTAAggcatattttgattttaacgtacagttttgaaaGTATTTAGGTACC
AATGATCCAATTGTAACGGtagtaactttgcagtgaatcactgtataaaa
ttttagaccaaacggactattttataaaaagttattcgagaaaaaccatt
ttgtcaaaaggacattttttcatgaaaaactgaaaactggttTCTACGAA
ACATCACTACTAGGGAAGAAAACCATTGACagcgtactttcaacacaaaa
agtttcagcctcaaatTCCACCTAAATTTTCAGATAGAGGGTACCTCTAT
TACTTGTAGGTTTAAGGGGTACCCACTGGTATAGTTTCGAGAGATAAATA
CAAAGTCTAAACTTATCTAGCATATTTATATGGCAGGGCATAACCCTATG
AATGTGAAAAAACATGGGTCAATAAACTTAAAATAAATTGTagatatttt
tttagaaataattatttaacataatttaaagtttgatatgaaagaatttt
ttcatCCCTATCCTCGAAACAAAACTTCTACTCGTAAGTTCAATGTCGCA
AGTTTTGTTCTGTTTGACgaagaattttattatttttgttaacTGGATAT
TGTCAAGAGCCAGATCAAAGCTTTACAAGTGTTTGCGGCTTCTTAGtgaa
aaataacttttctgCTGCTTCATATAATAAGCTCTCCTCCATTCCGTCAT
ACAGTCAGTCTAATTGACATCAATGTTCCTTGTTTACATACAATGACGTA
TGACTAAAAAAACACATTGACCTTCTTAGCTTCAACAAAACTTAACCACG
AGTTGCCGATTTCATTTAGGTTTCATGATTACCAAAAATTACACCGTGGA
ACACAGAACCACAATTCATGATATCCACGAGGTAATGTTTTTAAGGAAAC
ACCTCGGTTTTTTCCAGTAGTGGCAAACTTTGAACGGAAAAGAACGGGGA
GTTTCcgtagaagaaaaaaatattgcgtCATGAATATCACAAATACAACT
TGCTTCTCTAATGAATGGAATGATGATGCCAATACATAAATTCGCTGGTT
GGTGAACTCACATGTCAATGCAACATAATAATGTAGACAGGCTAGCCACA
AGTTCAGCATCCAATGTCCATTCTATGGTTTTATTCGGTTCAACAAATGA
ATCACCATCAAACTTGGTAAAGGTCTAACTtattctttgatgtaccattg
tctcattttaatgattttaaatCCAAAAGCTGTGAAGACTTCTTCTTCCG
TAGATCTTGAATACCTTCCAATTGGAGATTCCTTCTCGTTCAACCAGAGC
CCTCTTCCATCCAGATATCACTTTCCATTCAACTTGGTAAAGGTTCCATG
CTTGTTTTGATATCATGATCTCTCTGTAAAACTTCATTATTGTTCAATAG
CCTTTTCCTCCTTTTGTAAAACTTATACACGATATAAACTCCAACACCAA
GAATGAACAAGATGACAATTCCAACGATTACAAAAGCGATCTTGGTTTCA
CTTCGCGTTGCATCTCCTGTTAATGATGGATCTTCAGATTCTGATGAGCT
ACTCATTTTCTTTCAATACTTGATGATCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042848XLOC_042848Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068685-exon-scaffold_487-1491911889:23595..23615TCONS_00068685-exon-scaffold_487-1491911889:23595..23615Clytia hemisphaericaexon
TCONS_00068685-exon-scaffold_487-1510915933:23595..23615TCONS_00068685-exon-scaffold_487-1510915933:23595..23615Clytia hemisphaericaexon
TCONS_00068685-exon-scaffold_487-1575043694:23595..23615TCONS_00068685-exon-scaffold_487-1575043694:23595..23615Clytia hemisphaericaexon
TCONS_00068685-exon-scaffold_487-1491911889:33559..34035TCONS_00068685-exon-scaffold_487-1491911889:33559..34035Clytia hemisphaericaexon
TCONS_00068685-exon-scaffold_487-1510915933:33559..34035TCONS_00068685-exon-scaffold_487-1510915933:33559..34035Clytia hemisphaericaexon
TCONS_00068685-exon-scaffold_487-1575043694:33559..34035TCONS_00068685-exon-scaffold_487-1575043694:33559..34035Clytia hemisphaericaexon
TCONS_00068685-exon-scaffold_487-1491911889:34350..34593TCONS_00068685-exon-scaffold_487-1491911889:34350..34593Clytia hemisphaericaexon
TCONS_00068685-exon-scaffold_487-1510915933:34350..34593TCONS_00068685-exon-scaffold_487-1510915933:34350..34593Clytia hemisphaericaexon
TCONS_00068685-exon-scaffold_487-1575043694:34350..34593TCONS_00068685-exon-scaffold_487-1575043694:34350..34593Clytia hemisphaericaexon
TCONS_00068685-exon-scaffold_487-1491911889:36139..36251TCONS_00068685-exon-scaffold_487-1491911889:36139..36251Clytia hemisphaericaexon
TCONS_00068685-exon-scaffold_487-1510915933:36139..36251TCONS_00068685-exon-scaffold_487-1510915933:36139..36251Clytia hemisphaericaexon
TCONS_00068685-exon-scaffold_487-1575043694:36139..36251TCONS_00068685-exon-scaffold_487-1575043694:36139..36251Clytia hemisphaericaexon
TCONS_00068685-exon-scaffold_487-1491911889:36709..36881TCONS_00068685-exon-scaffold_487-1491911889:36709..36881Clytia hemisphaericaexon
TCONS_00068685-exon-scaffold_487-1510915933:36709..36881TCONS_00068685-exon-scaffold_487-1510915933:36709..36881Clytia hemisphaericaexon
TCONS_00068685-exon-scaffold_487-1575043694:36709..36881TCONS_00068685-exon-scaffold_487-1575043694:36709..36881Clytia hemisphaericaexon
TCONS_00068685-exon-scaffold_487-1491911889:37111..40623TCONS_00068685-exon-scaffold_487-1491911889:37111..40623Clytia hemisphaericaexon
TCONS_00068685-exon-scaffold_487-1510915933:37111..40623TCONS_00068685-exon-scaffold_487-1510915933:37111..40623Clytia hemisphaericaexon
TCONS_00068685-exon-scaffold_487-1575043694:37111..40623TCONS_00068685-exon-scaffold_487-1575043694:37111..40623Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_487supercontigscaffold_487:23595..40623 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.13203	0	0	0.000141123	0	0	0	0	0	0	0	0	0.00134156	6.13323e-06	0.00163998	0.0913146	0	0	0.286562	0.437629	1.49992e-08	0	3.36478e-10	0	0	0	1.19424	0	0.0617929	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068685 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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