TCONS_00068667 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068667
Unique NameTCONS_00068667
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length301

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068667 ID=TCONS_00068667|Name=TCONS_00068667|organism=Clytia hemisphaerica|type=transcript|length=301bp
TAAAGTGAATTTGTTCACGTGATGGCATTTTGAAATCAGTTCATTCCTAG
AATTCAAAAGCTTGTCAGGGTTTGGAAATGTAGCGATTTCAAGTTTCTCC
GCGAGACAAAGTGAGCATTTCAGTGACGAACGGTTGAACGGTTTCTTGTT
GCATTCAATCACAATTTCCAGTCCGTCCCCGTATTCACGGAACTTCGACT
GCAGATCCTTTTTGATTCGTTCGGATTTGTTGCCATTATTCTTATCCTAT
AAATATAACGAACGGCCATTCTACGGAAATTGCTGTCAAGTGACTTTTTT
C
Run BLAST on NCBI

transcript from alignment at scaffold_486:229356..229656

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068667 ID=TCONS_00068667|Name=TCONS_00068667|organism=Clytia hemisphaerica|type=transcript|length=301bp|location=Sequence derived from alignment at scaffold_486:229356..229656 (Clytia hemisphaerica)
GAAAAAAGTCACTTGACAGCAATTTCCGTAGAATGGCCGTTCGTTATATT
TATAGGATAAGAATAATGGCAACAAATCCGAACGAATCAAAAAGGATCTG
CAGTCGAAGTTCCGTGAATACGGGGACGGACTGGAAATTGTGATTGAATG
CAACAAGAAACCGTTCAACCGTTCGTCACTGAAATGCTCACTTTGTCTCG
CGGAGAAACTTGAAATCGCTACATTTCCAAACCCTGACAAGCTTTTGAAT
TCTAGGAATGAACTGATTTCAAAATGCCATCACGTGAACAAATTCACTTT
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042839XLOC_042839Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068667-exon-scaffold_486-1491911889:229356..229656TCONS_00068667-exon-scaffold_486-1491911889:229356..229656Clytia hemisphaericaexon
TCONS_00068667-exon-scaffold_486-1510915933:229356..229656TCONS_00068667-exon-scaffold_486-1510915933:229356..229656Clytia hemisphaericaexon
TCONS_00068667-exon-scaffold_486-1575043694:229356..229656TCONS_00068667-exon-scaffold_486-1575043694:229356..229656Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_486supercontigscaffold_486:229356..229656 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.770298	2.25348	3.48868	2.98649	15.5818	6.15649	6.93237	3.245	2.8412	3.87056	3.90207	2.39109	1.6784	0.798044	0.656101	0.704096	0.578259	0.889046	0	1.28529	1.48953	2.17963	0.441604	0.401482	2.89462	4.76641	4.58033	1.12724	2.38453	5.22648
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068667 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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