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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068655 ID=TCONS_00068655|Name=TCONS_00068655|organism=Clytia hemisphaerica|type=transcript|length=1407bp
ttgcgtgaacgtgaaaatccactttttgattgcgcgaatacgtgaatttt
cccttttttccaccgattatgtgcagttttcccgattttccaatgtttcc
ccgatttttcccgaaaaaattccggtttctgaaaaatcggattATTGTAT
GAAACACGAGGAAAATTTGCGGCaatgcgtgaatttggaaaaaaaattgc
gtgattgcgtgaattgagtgtccgctggggggcctcatataACCATGAAA
TCGATAACCTTTGATTTCTAATAAGACTCAGAGTGAGATTGTTTTTCCAG
TATTAAAAATGTATTAAATATAAATAAATGTTGCTAAGTTGCTAACTATA
AAAGAAGATTTATCCCAAAAATGACATCGTTGTAGCTGTTATAAGAAAAC
TGCATTATATTCCTAAactgaattgaaatattttaaagtaCAAAatgtgt
tgaacggtgaaaaagaatgtggctgttatcatttgattttttttaaaagt
tgtACAAGTCTCAGTGTTTTTCCCTGAGTGTGTTGCGTTTATCCGTTTGG
TGATTGTATTGTTTTCATGATTGTGACTAACTTCGGCGTTGGGTTTAGaa
tctaaatattttatcattaaCGGTACGTTTCCAAATCGATAGCTTTGATG
ATTTCAACGATGGTCAAATGATCAGTGTCATCATCTTCTGGGTCTTTACC
AAAGGACGTCCAGAATGACATGTGATGGTACCCAGGGTAATCTTCTTCCC
AGGCTCCTAACGGTTTGTTAAATTGAGAGTGACGAGCCATTTGATGGCCA
CCACCCATAACATCGAAAGCCTATGAGTAAAAATAGAAACAGTTATTTTG
CGGTCGTATGACAAGAAAAATGTCTCATAAAGGTAGGTCACAAAAAAACG
CCTCAACGTTGTCAAGCACAATACAGTATAGAAGcatactcaaaaagtta
aaagttgAGAAAGATAACTGAATTTATATTGAAAGAACAAAGAATTTCCA
TTGTTGTTGTGATTAAAGTCAActtctctctctctaattcgaataaagtt
tttggtcccttgaagatcgaattagaaagaaTTTACTGTATTTCAGTCCT
AGTGAAGTAGGAAATTATTATGTTTACTGCATAGAAAAGCTGTTCCTTTC
TTTACCAAGCAATGAATATATAGTTTTACCTTGTTAAACTCTAATTTCAT
GCCACCATTTTTACGATCAGGGAGAACATAAACGCAGTGAGGAGGACAAT
GGTAAAGTATGCGCATGCCCAGGATGTTTCCGTTTGATTTGAAGCCAGTa
ccttaaaaaaataaattcagtaAAAGTCAAATAccctattcttgatatgc
gtaagtcaagataaCGTCATCTTTTCTAACGAAAGCATCCaaaaaagccg
gattttg Run BLAST on NCBI transcript from alignment at scaffold_486:73956..75362 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068655 ID=TCONS_00068655|Name=TCONS_00068655|organism=Clytia hemisphaerica|type=transcript|length=1407bp|location=Sequence derived from alignment at scaffold_486:73956..75362 (Clytia hemisphaerica)
caaaatccggcttttttGGATGCTTTCGTTAGAAAAGATGACGttatctt
gacttacgcatatcaagaatagggTATTTGACTTTtactgaatttatttt
tttaaggtACTGGCTTCAAATCAAACGGAAACATCCTGGGCATGCGCATA
CTTTACCATTGTCCTCCTCACTGCGTTTATGTTCTCCCTGATCGTAAAAA
TGGTGGCATGAAATTAGAGTTTAACAAGGTAAAACTATATATTCATTGCT
TGGTAAAGAAAGGAACAGCTTTTCTATGCAGTAAACATAATAATTTCCTA
CTTCACTAGGACTGAAATACAGTAAAttctttctaattcgatcttcaagg
gaccaaaaactttattcgaattagagagagagaagTTGACTTTAATCACA
ACAACAATGGAAATTCTTTGTTCTTTCAATATAAATTCAGTTATCTTTCT
caacttttaactttttgagtatgCTTCTATACTGTATTGTGCTTGACAAC
GTTGAGGCGTTTTTTTGTGACCTACCTTTATGAGACATTTTTCTTGTCAT
ACGACCGCAAAATAACTGTTTCTATTTTTACTCATAGGCTTTCGATGTTA
TGGGTGGTGGCCATCAAATGGCTCGTCACTCTCAATTTAACAAACCGTTA
GGAGCCTGGGAAGAAGATTACCCTGGGTACCATCACATGTCATTCTGGAC
GTCCTTTGGTAAAGACCCAGAAGATGATGACACTGATCATTTGACCATCG
TTGAAATCATCAAAGCTATCGATTTGGAAACGTACCGttaatgataaaat
atttagattCTAAACCCAACGCCGAAGTTAGTCACAATCATGAAAACAAT
ACAATCACCAAACGGATAAACGCAACACACTCAGGGAAAAACACTGAGAC
TTGTacaacttttaaaaaaaatcaaatgataacagccacattctttttca
ccgttcaacacatTTTGtactttaaaatatttcaattcagtTTAGGAATA
TAATGCAGTTTTCTTATAACAGCTACAACGATGTCATTTTTGGGATAAAT
CTTCTTTTATAGTTAGCAACTTAGCAACATTTATTTATATTTAATACATT
TTTAATACTGGAAAAACAATCTCACTCTGAGTCTTATTAGAAATCAAAGG
TTATCGATTTCATGGTtatatgaggccccccagcggacactcaattcacg
caatcacgcaattttttttccaaattcacgcattGCCGCAAATTTTCCTC
GTGTTTCATACAATaatccgatttttcagaaaccggaattttttcgggaa
aaatcggggaaacattggaaaatcgggaaaactgcacataatcggtggaa
aaaagggaaaattcacgtattcgcgcaatcaaaaagtggattttcacgtt
cacgcaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068655-exon-scaffold_486-1491911889:73956..75362 | TCONS_00068655-exon-scaffold_486-1491911889:73956..75362 | Clytia hemisphaerica | exon |
| TCONS_00068655-exon-scaffold_486-1510915933:73956..75362 | TCONS_00068655-exon-scaffold_486-1510915933:73956..75362 | Clytia hemisphaerica | exon |
| TCONS_00068655-exon-scaffold_486-1575043694:73956..75362 | TCONS_00068655-exon-scaffold_486-1575043694:73956..75362 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_486 | supercontig | scaffold_486:73956..75362 . |
Blast
The following BLAST results are available for this feature:
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