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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068652 ID=TCONS_00068652|Name=TCONS_00068652|organism=Clytia hemisphaerica|type=transcript|length=844bp
gtttttaacatCAATGCTGATAAAATACTCATGTTCTTAGTAGATGGTGT
AGTCGTTTATTCCTTGCACACGCAAAGTGTAATTGCAAAACATTATATCA
AAGAAATGTTCTTCCGCTTTGAATGGGCTCATGATTTGAAGCATGGTgaa
attttgattcattttgctGAGAAACGGACCAAATTAAACGTTTATAGCAT
TAATTACTTGGAGAAAACATTGTCCTTGATAACTACAGTTAATGTTTCAG
ATTTCATACCAAAACATCTTAGTTTCAGTTTTCGTTGCCAGAAGCTATTT
CATCAAGTGACTTCTGGCACATCTTTATTGATACTGGCAAGGCGAGATGT
TTATTTGATCGACCCTTTCACAGGTCATCTCTTACAAAAGATAACATCTG
ATGTCAGTAGACCAAATATCTCTGTTAGAAATGTCCAGTTGAATTGGTGC
TCGAATGAAGTAGTGGTGTTTTATAGCGACGTTGACAATAAATTGTTTGG
GaaagttttcaaattgaaaacaAGACTGGTCGAACGACTGCTACATTCTG
CACTTAAAATTGTATTGTTAGATTATTCCATCAATGATTTGGTACAAATG
AACTTACCCAAGTCGATTAAGGAtagattttttaaatgacaagcTAAAGT
TTCTTGTATACTACAAGGTGAGCAAAAAAAGGTATGGCCTGATAATAATT
AGTTGATcaaatttatttgtttataattttaattttgattttcttttgat
gcACTGATctattttgaatgtttacttgatttttttttccaatctaAATT
TAGTACTATAGTGATTATTTAggttaattttattttagttttaa Run BLAST on NCBI protein sequence of TCONS_00068652-protein >TCONS_00068652-protein ID=TCONS_00068652-protein|Name=TCONS_00068652-protein|organism=Clytia hemisphaerica|type=polypeptide|length=212bp
VFNINADKILMFLVDGVVVYSLHTQSVIAKHYIKEMFFRFEWAHDLKHGE
ILIHFAEKRTKLNVYSINYLEKTLSLITTVNVSDFIPKHLSFSFRCQKLF
HQVTSGTSLLILARRDVYLIDPFTGHLLQKITSDVSRPNISVRNVQLNWC
SNEVVVFYSDVDNKLFGKVFKLKTRLVERLLHSALKIVLLDYSINDLVQM
NLPKSIKDRFFK Run BLAST on NCBI transcript from alignment at scaffold_486:64957..65800 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068652 ID=TCONS_00068652|Name=TCONS_00068652|organism=Clytia hemisphaerica|type=transcript|length=844bp|location=Sequence derived from alignment at scaffold_486:64957..65800 (Clytia hemisphaerica)
ttaaaactaaaataaaattaaccTAAATAATCACTATAGTACTAAATTta
gattggaaaaaaaaatcaagtaaacattcaaaatagATCAGTgcatcaaa
agaaaatcaaaattaaaattataaacaaataaatttgATCAACTAATTAT
TATCAGGCCATACCTTTTTTTGCTCACCTTGTAGTATACAAGAAACTTTA
gcttgtcatttaaaaaatctaTCCTTAATCGACTTGGGTAAGTTCATTTG
TACCAAATCATTGATGGAATAATCTAACAATACAATTTTAAGTGCAGAAT
GTAGCAGTCGTTCGACCAGTCTtgttttcaatttgaaaactttCCCAAAC
AATTTATTGTCAACGTCGCTATAAAACACCACTACTTCATTCGAGCACCA
ATTCAACTGGACATTTCTAACAGAGATATTTGGTCTACTGACATCAGATG
TTATCTTTTGTAAGAGATGACCTGTGAAAGGGTCGATCAAATAAACATCT
CGCCTTGCCAGTATCAATAAAGATGTGCCAGAAGTCACTTGATGAAATAG
CTTCTGGCAACGAAAACTGAAACTAAGATGTTTTGGTATGAAATCTGAAA
CATTAACTGTAGTTATCAAGGACAATGTTTTCTCCAAGTAATTAATGCTA
TAAACGTTTAATTTGGTCCGTTTCTCagcaaaatgaatcaaaatttcACC
ATGCTTCAAATCATGAGCCCATTCAAAGCGGAAGAACATTTCTTTGATAT
AATGTTTTGCAATTACACTTTGCGTGTGCAAGGAATAAACGACTACACCA
TCTACTAAGAACATGAGTATTTTATCAGCATTGatgttaaaaac Coding sequence (CDS) from alignment at scaffold_486:64957..65800 >TCONS_00068652 ID=TCONS_00068652|Name=TCONS_00068652|organism=Clytia hemisphaerica|type=CDS|length=639bp|location=Sequence derived from alignment at scaffold_486:64957..65800 (Clytia hemisphaerica)
tcatttaaaaaatctaTCCTTAATCGACTTGGGTAAGTTCATTTGTACCA
AATCATTGATGGAATAATCTAACAATACAATTTTAAGTGCAGAATGTAGC
AGTCGTTCGACCAGTCTtgttttcaatttgaaaactttCCCAAACAATTT
ATTGTCAACGTCGCTATAAAACACCACTACTTCATTCGAGCACCAATTCA
ACTGGACATTTCTAACAGAGATATTTGGTCTACTGACATCAGATGTTATC
TTTTGTAAGAGATGACCTGTGAAAGGGTCGATCAAATAAACATCTCGCCT
TGCCAGTATCAATAAAGATGTGCCAGAAGTCACTTGATGAAATAGCTTCT
GGCAACGAAAACTGAAACTAAGATGTTTTGGTATGAAATCTGAAACATTA
ACTGTAGTTATCAAGGACAATGTTTTCTCCAAGTAATTAATGCTATAAAC
GTTTAATTTGGTCCGTTTCTCagcaaaatgaatcaaaatttcACCATGCT
TCAAATCATGAGCCCATTCAAAGCGGAAGAACATTTCTTTGATATAATGT
TTTGCAATTACACTTTGCGTGTGCAAGGAATAAACGACTACACCATCTAC
TAAGAACATGAGTATTTTATCAGCATTGatgttaaaaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068652-exon-scaffold_486-1491911889:64957..65800 | TCONS_00068652-exon-scaffold_486-1491911889:64957..65800 | Clytia hemisphaerica | exon |
| TCONS_00068652-exon-scaffold_486-1510915933:64957..65800 | TCONS_00068652-exon-scaffold_486-1510915933:64957..65800 | Clytia hemisphaerica | exon |
| TCONS_00068652-exon-scaffold_486-1575043694:64957..65800 | TCONS_00068652-exon-scaffold_486-1575043694:64957..65800 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_486 | supercontig | scaffold_486:64957..65800 . |
Blast
The following BLAST results are available for this feature:
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