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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068643 ID=TCONS_00068643|Name=TCONS_00068643|organism=Clytia hemisphaerica|type=transcript|length=773bp
AAGCAACTCGTCTCCGTGAATGTTGTTTGGATGTTATAAAGACGCAGCAA
ACTGAAATCTGTCATTCAAAGAGAGTTGTCGTCGATCTCAGTCAATCTTC
agtttttgacgattttttcttttttctcaatgcaacaaaagagagaatct
atttttatttcaaaagagACAGTGTCTTAAGAATTGACGAATATGACTAC
ACTGGCAATTTTTGTTATGTTTATTCGATTGCAATAGATGATGGATACCA
TGATTATCATTTTGACGACCGTTATATTGTTTTATCACACAAAAGAATTA
CTCACAAGGATAATGCTATACGAGTTTGGGAATTGAATCAAGATAGGACA
TGTATTGTTCAAGAGTTTAATGATGAAATAATTGATTACGAAACATCAGA
TGTAAAGTCATTTTCGTTTCAATATTCGATCAAAAGGTTTGTTGATTTCC
TTTTGGTTGCCAATGCTTCTGACTTTAATAAAGGCAGACAACTTGTCTCT
TGGATTCAAATTTGCAATGGAGAGAAATTAAGAGGGTATGGGATTTTTAG
AGGATTGCCTTTaccgaatttttttttaaattggaaTCTGCACGAAGTTG
GGATCACTTATTTTGACGAGATGACGATGGAGaggcagaaaatgtttttc
aaaatcgcTCATGTAAATATGAATGaatattcaattcaaaaaatCACTCT
GAAACATTTGGCACGAGTGGTAGTACTTCAATTATTTAGCAGTAACGAAT
TACTAAAGCTCAATCTACCATCA Run BLAST on NCBI protein sequence of TCONS_00068643-protein >TCONS_00068643-protein ID=TCONS_00068643-protein|Name=TCONS_00068643-protein|organism=Clytia hemisphaerica|type=polypeptide|length=257bp
ATRLRECCLDVIKTQQTEICHSKRVVVDLSQSSVFDDFFFFLNATKERIY
FYFKRDSVLRIDEYDYTGNFCYVYSIAIDDGYHDYHFDDRYIVLSHKRIT
HKDNAIRVWELNQDRTCIVQEFNDEIIDYETSDVKSFSFQYSIKRFVDFL
LVANASDFNKGRQLVSWIQICNGEKLRGYGIFRGLPLPNFFLNWNLHEVG
ITYFDEMTMERQKMFFKIAHVNMNEYSIQKITLKHLARVVVLQLFSSNEL
LKLNLPS Run BLAST on NCBI transcript from alignment at scaffold_486:24485..25257 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068643 ID=TCONS_00068643|Name=TCONS_00068643|organism=Clytia hemisphaerica|type=transcript|length=773bp|location=Sequence derived from alignment at scaffold_486:24485..25257 (Clytia hemisphaerica)
TGATGGTAGATTGAGCTTTAGTAATTCGTTACTGCTAAATAATTGAAGTA
CTACCACTCGTGCCAAATGTTTCAGAGTGattttttgaattgaatattCA
TTCATATTTACATGAgcgattttgaaaaacattttctgcctCTCCATCGT
CATCTCGTCAAAATAAGTGATCCCAACTTCGTGCAGAttccaatttaaaa
aaaaattcggtAAAGGCAATCCTCTAAAAATCCCATACCCTCTTAATTTC
TCTCCATTGCAAATTTGAATCCAAGAGACAAGTTGTCTGCCTTTATTAAA
GTCAGAAGCATTGGCAACCAAAAGGAAATCAACAAACCTTTTGATCGAAT
ATTGAAACGAAAATGACTTTACATCTGATGTTTCGTAATCAATTATTTCA
TCATTAAACTCTTGAACAATACATGTCCTATCTTGATTCAATTCCCAAAC
TCGTATAGCATTATCCTTGTGAGTAATTCTTTTGTGTGATAAAACAATAT
AACGGTCGTCAAAATGATAATCATGGTATCCATCATCTATTGCAATCGAA
TAAACATAACAAAAATTGCCAGTGTAGTCATATTCGTCAATTCTTAAGAC
ACTGTctcttttgaaataaaaatagattctctcttttgttgcattgagaa
aaaagaaaaaatcgtcaaaaactGAAGATTGACTGAGATCGACGACAACT
CTCTTTGAATGACAGATTTCAGTTTGCTGCGTCTTTATAACATCCAAACA
ACATTCACGGAGACGAGTTGCTT Coding sequence (CDS) from alignment at scaffold_486:24485..25257 >TCONS_00068643 ID=TCONS_00068643|Name=TCONS_00068643|organism=Clytia hemisphaerica|type=CDS|length=771bp|location=Sequence derived from alignment at scaffold_486:24485..25257 (Clytia hemisphaerica)
TGATGGTAGATTGAGCTTTAGTAATTCGTTACTGCTAAATAATTGAAGTA
CTACCACTCGTGCCAAATGTTTCAGAGTGattttttgaattgaatattCA
TTCATATTTACATGAgcgattttgaaaaacattttctgcctCTCCATCGT
CATCTCGTCAAAATAAGTGATCCCAACTTCGTGCAGAttccaatttaaaa
aaaaattcggtAAAGGCAATCCTCTAAAAATCCCATACCCTCTTAATTTC
TCTCCATTGCAAATTTGAATCCAAGAGACAAGTTGTCTGCCTTTATTAAA
GTCAGAAGCATTGGCAACCAAAAGGAAATCAACAAACCTTTTGATCGAAT
ATTGAAACGAAAATGACTTTACATCTGATGTTTCGTAATCAATTATTTCA
TCATTAAACTCTTGAACAATACATGTCCTATCTTGATTCAATTCCCAAAC
TCGTATAGCATTATCCTTGTGAGTAATTCTTTTGTGTGATAAAACAATAT
AACGGTCGTCAAAATGATAATCATGGTATCCATCATCTATTGCAATCGAA
TAAACATAACAAAAATTGCCAGTGTAGTCATATTCGTCAATTCTTAAGAC
ACTGTctcttttgaaataaaaatagattctctcttttgttgcattgagaa
aaaagaaaaaatcgtcaaaaactGAAGATTGACTGAGATCGACGACAACT
CTCTTTGAATGACAGATTTCAGTTTGCTGCGTCTTTATAACATCCAAACA
ACATTCACGGAGACGAGTTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068643-exon-scaffold_486-1491911889:24485..25257 | TCONS_00068643-exon-scaffold_486-1491911889:24485..25257 | Clytia hemisphaerica | exon |
| TCONS_00068643-exon-scaffold_486-1510915933:24485..25257 | TCONS_00068643-exon-scaffold_486-1510915933:24485..25257 | Clytia hemisphaerica | exon |
| TCONS_00068643-exon-scaffold_486-1575043694:24485..25257 | TCONS_00068643-exon-scaffold_486-1575043694:24485..25257 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_486 | supercontig | scaffold_486:24485..25257 . |
Blast
The following BLAST results are available for this feature:
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