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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068635 ID=TCONS_00068635|Name=TCONS_00068635|organism=Clytia hemisphaerica|type=transcript|length=1454bp
gttgaattgaatttttatgAATGGCTAACCATGAGTATGGAATTTATAAT
TATATGAAAAGAAAATGGCTGAACTTCCCCATCCAgtcaagaaacatttt
ttaacttCTTCATATCTCAACAAAAATTACTTAAGTCAACCTGATGCGAC
CAAAATCATACACaacaatgaagaagaaaatactCCTCTAGTACCTCACA
CTCTTGGTTTTGATTCTACTGGTAAATCATTCTCAGTTTTGGACTTTCCA
TCTGAAAACAACCCTAAAATTCATGTTTTGGAATCTAGTCCTAAAGCAGC
AGTTTGTGATGACATATTGACAcaacaaactttagaaatatCCAACCTAC
CTATTTCAGATCGTTTTAATAGTTGTTTATATGATTCTGAATTGAACTGC
TTATTCATTTTCATCAACAACCGTAATGAACACCACCTTggattaaaaat
aaatatttttggattCTGGTTAGATTCTtcaaaatatgattcttcagcAT
GTATCGTATTCAATCCAACGTCTACAGTAAAAATGTCTTTGGATATTGAG
GGTATTAATCTTTACACCAAATCCTTGGTAAAAGCTGGACAAACCCATTA
CATAGCACTTTTTGCCCGCGGACTGAAATACGGTTTCAAGTCATATCAAG
TTGATTATAGTGAGGGACCTGTCATTCACCTCATTCAATATAATTCTGCA
CGTAATAGTTTCTTACATCATCAACAAATCCAACTTGAGGTTGGGATCGt
ggaaaataatttaaaaaacttgGAATTGTTTTTGGACGCAACAGCATCAA
AAATTTATCTCCTTGAGCCATACTCTCCTTATGTTATGAGAGAATTATCA
AGCTCCGGCGAAAAGCTTCACACCTATGAAGTGCAAACTGAAAAATATGT
TGACTTTATAGAACAATGCAGTAATTCAACTTTCCTATACGTCACCGAAG
ACATGATTGTCTATTTAGTCAATCTTTGTAATGGTAAAATTcatatttta
aaagaattttcactTTGCATTGGCGTAGATGGAATTCAAAGATTTCGTTT
GTTTTCAATGTTTAAATCTTACGGTAAAGTGTTGCTGAGTATGCAAAATT
CAAATTGTCGTGTTATTTTGATAGATGTTTTACGTGAAGAACGTGTTTGT
GAACTTCCATTGCAGTATCCAGTATCTTCAATCAATTTGAATTGGAATAT
GACAGAGATGGCAGTCACTAGATGCAACTCCCATaaccacttttgttttt
ctgtttatAAATTACCAGCTATAGACTTGTCTCTGAAACATATATCAAGA
GTagcaattttgacaaatttttcattCGATTTTTTAGTGAGCTGCTCTTT
GCCCACAAGTCTTAAAAGGTATCTCGAAGTCATTTGAGTTCAATGatgta
ttttttgtattttttgatatttcaacTGGTAGTTATAGTCAACTCAAGTT
TGAT Run BLAST on NCBI transcript from alignment at scaffold_486:279571..281080- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068635 ID=TCONS_00068635|Name=TCONS_00068635|organism=Clytia hemisphaerica|type=transcript|length=1510bp|location=Sequence derived from alignment at scaffold_486:279571..281080- (Clytia hemisphaerica)
GTTGAATTGAATTTTTATGAATGGCTAACCATGAGTATGGAATTTATAAT
TATATGAAAAGAAAATGGCTGAACTTCCCCATCCAGTCAAGAAACATTTT
TTAACTTCTTCATATCTCAACAAAAATTACTTAAGTCAACCTGATGCGAC
CAAAATCATACACAACAATGAAGAAGAAAATACTCCTCTAGTACCTCACA
CTCTTGGTTTTGATTCTACTGGTAAATCATTCTCAGTTTTGGACTTTCCA
TCTGAAAACAACCCTAAAATTCATGTTTTGGAATCTAGTCCTAAAGCAGC
AGTTTGTGATGACATATTGACACAACAAACTTTAGAAATATCCAACCTAC
CTATTTCAGATCGTTTTAATAGTTGTTTATATGATTCTGAATTGAACTGC
TTATTCATTTTCATCAACAACCGTAATGAACACCACCTTGGATTAAAAAT
AAATATTTTTGGATTCTGGTTAGATTCTTCAAAATATGATTCTTCAGCAT
GTATCGTATTCAATCCAACGTCTACAGTAAAAATGTCTTTGGATATTGAG
GGTATTAATCTTTACACCAAATCCTTGGTAAAAGCTGGACAAACCCATTA
CATAGCACTTTTTGCCCGCGGACTGAAATACGGTTTCAAGTCATATCAAG
TTGATTATAGTGAGGGACCTGTCATTCACCTCATTCAATATAATTCTGCA
CGTAATAGTTTCTTACATCATCAACAAATCCAACTTGAGGTTGGGATCGT
GGAAAATAATTTAAAAAACTTGGAATTGTTTTTGGACGCAACAGCATCAA
AAATTTATCTCCTTGAGCCATACTCTCCTTATGTTATGAGAGAATTATCA
AGCTCCGGCGAAAAGCTTCACACCTATGAAGTGCAAACTGAAAAATATGT
TGACTTTATAGAACAATGCAGTAATTCAACTTTCCTATACGTCACCGAAG
ACATGATTGTCTATTTAGTCAATCTTTGTAATGGTAAAATTCATATTTTA
AAAGAATTTTCACTTTGCATTGGCGTAGATGGAATTCAAAGATTTCGTTT
GTTTTCAATGTTTAAATCTTACGGTAAAGTGTTGCTGAGTATGCAAAATT
CAAATTGTCGTGTTATTTTGATAGATGTTTTACGTGAAGAACGTGTTTGT
GAACTTCCATTGCAGTATCCAGTATCTTCAATCAATTTGAATTGGAATAT
GACAGAGATGGCAGTCACTAGATGCAACTCCCATAACCACTTTTGTTTTT
CTGTTTATAAATTACCAGCTATAGACTTGTCTCTGAAACATATATCAAGA
GTAGCAATTTTGACAAATTTTTCATTCGATTTTTTAGTGAGCTGCTCTTT
GCCCACAAGTCTTAAAAGGTATCTCGAAGTCATTTGAGTTATATGATGTA
TTTTTTNCCCACAAGTCTTAAAAGGTATCTCGAAGTCATTTGAGTTCAAT
GATGTATTTTTTGTATTTTTTGATATTTCAACTGGTAGTTATAGTCAACT
CAAGTTTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068635-exon-scaffold_486-1575043694:279713..281080 | TCONS_00068635-exon-scaffold_486-1575043694:279713..281080 | Clytia hemisphaerica | exon |
| TCONS_00068635-exon-scaffold_486-1575043694:279571..279656 | TCONS_00068635-exon-scaffold_486-1575043694:279571..279656 | Clytia hemisphaerica | exon |
| TCONS_00068635-exon-scaffold_486-1510915933:279713..281080 | TCONS_00068635-exon-scaffold_486-1510915933:279713..281080 | Clytia hemisphaerica | exon |
| TCONS_00068635-exon-scaffold_486-1510915933:279571..279656 | TCONS_00068635-exon-scaffold_486-1510915933:279571..279656 | Clytia hemisphaerica | exon |
| TCONS_00068635-exon-scaffold_486-1491911889:279713..281080 | TCONS_00068635-exon-scaffold_486-1491911889:279713..281080 | Clytia hemisphaerica | exon |
| TCONS_00068635-exon-scaffold_486-1491911889:279571..279656 | TCONS_00068635-exon-scaffold_486-1491911889:279571..279656 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_486 | supercontig | scaffold_486:279571..281080 - |
Blast
The following BLAST results are available for this feature:
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