TCONS_00068631 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068631
Unique NameTCONS_00068631
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1914

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068631 ID=TCONS_00068631|Name=TCONS_00068631|organism=Clytia hemisphaerica|type=transcript|length=1914bp
ttttcagaaaaaataataattaacaataaaaaaaactgaTAAATAATGAC
ATAACAGATCATCAATTTGGTCACACCATCCTCAAATAAAATCGATTGGG
AAACTTACATTGAAATTTCGACTTAAAGAGTTCGACCATGGCACAAACAT
CAACAGACAACACAAGTCCAGTACCTAACCTTGCTTTTCAATCCATTATT
CGACCTGCACTGGCTGGGttgtcAAATGATGGGAAGTCACATAAAGAACT
TCGATCTTCATTGAACGAACTCATTCAGGCTTTCAAAGTGGCAGAAGAAT
GCATTCCTGGAATCACTCAAGAAGTACTTGCTGGTATTTTACGTGCagAT
GGGTACTCGATGAATATCAATGAGATCTTGTTACGATGCTCCAACACTGT
GACTGACAATTTTCAAATCGAACGAGCGGAACCTGAGTTTGTCAAACTGG
AGAAAAAAGCGAATGaattgaAAACGATTCTTGGCAAGATACCAGACGAC
ATCAAAGATCGAACAAAATTCCTACAAACAATCAAAGACATTGCAAGTGC
AATCAAGGAGTTATTGGACTCTGTCAATCAAGTCCTTAAAACTTACCAAG
ATCAAGGGAGAATCAAAGAATATCGAAAGactTTGGAGCAGAATAAGCGA
GAATTCGTAAAGTATTCAAAAAGCTTCAGTGACACGTTGAAGCAATACTT
CAAAGACCAAAAGTAAAACAGTGTATTTTATAGTGCAAACTGTTTAATCA
ACCAAACCAATAATATTCTACTCGTTTTTCGAATGGTTGGGAAAAATTGA
ACACGTGTGCAACATAAGACAAATTACCGGACAGTACAACAGGACACATT
TTGTTCTTCATTCTTcatttgtttgttattgttgaTGTTTTACTGAAGAG
TCAAAGAATTGGTTAAAGCTGTTGTACTAACTTTCAGTGGCGGATCTGAG
GGGGGTTCCaaacaatgaagtataagcccgaagggctagaagtcaatctc
tttggtaggatttgaagccaacaaatccaaagttgcgcggccttgagcga
cccgcctggtttttacacaaatgacagattaattttgaaaaatatatcac
tcgaaaacaaaggaattgctagattcaatccgtcatcaaaaatacggcgc
atattttaaggcttcaatttttcttgcctgagaaaggttagagattgacc
tctagcccttcgggcttgaaactcaatggttccaAATTTACGACGGAGAG
TCTTCAATTACTTTTAAGGAGTATGGCCAAAAAACCCTCTCCATCATATA
TTTTGAGCCCCCTTTAGATCCGCAACTGACTCTTGTACCGTATACAGTAT
CTTGCTTTGTAACGTTGAACGGTTATTATTGCTCTGGCTTTGTTGTATTG
GCACGGAGTTTTTCCTTGTAAACTTCAAATTGTACAAACCAAACAAAATG
TTGACATTCTTTTGGCCCACTGAAATATAAAGTACCTCTGGGAACGGTAA
TACAAACATTTGCCTGAGCATGTCATCTGATATGGATCCAGTGGTCGAAA
CTTTTGTAGATGTAAACTCAGGTTACAGAAGTGGAATGTGTCATATCTGA
GTAATTGTGAAAAGTAAAAACTGGTACTACTTTGGATATATTGTCctttt
tcatttccaaaaatatactgcAGCAACCTGCTGACTGACATCGCATTCGA
ACTATGGGGGTGTTTTGGCCTAACGTAATGTCACTGTATCGAGTGAATGC
ACTAAGATGCACTATTGGGAATGTCTtgtaatatttaaatttttgtatat
tttaatgaattatgcgtgtttttaaagatttgtaTATCATAAAGTAATTA
AGCTTTTCACTTTTTCCTCAGTTCAAAACctttcattttttgtaaacaCC
CCCTTTTCGCTGAT
Run BLAST on NCBI

transcript from alignment at scaffold_486:267830..279145-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068631 ID=TCONS_00068631|Name=TCONS_00068631|organism=Clytia hemisphaerica|type=transcript|length=11316bp|location=Sequence derived from alignment at scaffold_486:267830..279145- (Clytia hemisphaerica)
TTTTCAGAAAAAATAATAATTAACAATAAAAAAAACTGATAAATAATGAC
ATAACAGATCATCAATTTGGTCACACCATCCTCAAATAAAATCGATTGGG
AAACTTACATTGAAATTTCGACTTAAAGAGTTCGACCATGGCACAAACAT
CAACAGACAACACAAGTCCAGTACCTAACCTTGCTTTTCAATCCATTATT
CGACCTGCACTGGCTGGGGTAAGAAGACATATAAAAATATAAGATAAATT
TCATTTATTGTTTATATTTTGTGCTATAATACCTTCTTTGATTATTGAAA
ATAATGACTTGAACTGGTTTGACAATGCACGTCAATTATTTTTAACAGTT
TCAAGGGACATAAAAGTACTGACGAAATTTGTAAACTAACTGTATGCAGC
AAAATCAAAACAAATGTCACATGTCAAAATGAAAAACATAGCTGATTTTG
AATGTTTCAATTGTTTTACAAGTTTGTTTTGGACACGTGGTTCGCACAAT
GTTTACATTTTACTGCTTTTATGTCTCTTTAACAAAACACTGTTCTTTAT
ATTGTTTGTTTGTTGTTTGATACTGTTAGATTTGGTTAATTAAAAACAAT
TGAATTTTTTTTTTTTTTCAGTTGTCAAATGATGGGAAGTCACATAAAGA
ACTTCGATCTTCATTGAACGAACTCATTCAGGCTTTCAAAGTGGTAAAAT
AGAAATAATTTGAAATAAATGTTTTTAAAACCCTTTTTTTAAGTTTATGT
TCTATCCCAAATTGACATAGTAACCCCCTTTCTAAAGCCTCCCTTTAGGG
GTAGAGTCTCCCTATAAGGGAGGAGTAGGGGAAAGGGCCTTATAAACTAA
AGCCTCCAGTTTTACTTTTTTTGTTTCTGATTAGTAAAATTTCCTTATAA
TAATGTTTTAAAGGGATCATCATTATTGATGGACACTGAAAATGGTGGTT
TTTCAGTAGGTAGATTTAAGGGATGTCCCCGTTATTTAATTGTCTCTAAA
TACAAAAGTCACCGAACCTTAAGAACACTAATTAACTCCAGCAATTTCCT
GATAGAAAAGAAAAACTGAGACTGAATGTTGTATTTCCCTTACAGGCAGA
AGAATGCATTCCTGGAATCACTCAAGAAGTACTTGCTGGTATTTTACGTG
CAGGTTTTTTTTGGTTTTTTTTTTATTAAATTCTCTTTTAAAACAATATC
CTCTACTTTAGGCTATATAACAAAATTTACACTTTCGTTTTTGATTAAAA
ATAAAAGCAACAGTTATATATGATAAGATATATAGGGCACTGAAATTTAA
GAAAAACGGGATATCCGCTATGCCCTATGGAGGAGAGACCGATCTTGCCA
GCGGGGCCTATCCGATGTTCGAAAGCGGTCTTGCCTCCAAAGGCCTAAGT
GCGGACCCCACAATAGCCGAGTGGCGACGAAAAGAGCCAGGGACTTGGAG
TTGAGATTTTTTTCGGACCTAGACGGACAGAAGACGAGGATTCAGAATAT
TCAGAACTTTACCATATGGTATGAAATTTAAAATTTATCAGCAAAAAGGT
TATAATTTTGATCATTCTTCTGTTTAAGAGTGCCTTCTTCAATTAATGTA
CTATTCTATTTAATTGCCATACAGGGGATCATAGTGTCCTCCCCCCCCCC
TTTATAAAGGGGGGGGGATTCTGATTTTGGCCCTTTTTTTAAAGTATGGG
GGAAAATGAAAAATTTGAANATAAAGAGGGGGGAAAACCATAAATTTAGG
AGATTTTGACTGGGGGAACTTCACTGATCTCAAGCTGATCTTGTGGCAAA
ACCTGTTTAAGCAATAAAATCAGCAAATCTTTTGGGATAAACCAACTTTT
CAATACAATTTCATTTTTCCAGCACTTTCAAGGCTATTTTTTCAAGCTTT
CCAAAATTTCAAACTTGATTTAAGGCATATTTATGTTAACCATATGGACC
ATATGGGGAACCGCAAAATCTTCAAATAGCTGGGGGAATTCAAAAAAGAG
GGGGGAACCGAAAAATTTTGAAATATGGTGGGGGAAATAAAAGAGGGGGG
AATGGAGAAAAATTTTGATTTTTAGTGGGGGGAACCAACCCAGGAGGACA
CTATGGGGGATAGGTGAGCCTTTTCAAGGCAAAAAACATTTAAGGTTCGG
TATGAAATTTAAAATTTATCAGCAAAAAGGTTATAATTTTGATCATTCTT
CTGTTTAAGAGTGCCTTCTTCAATGAATTTACTATTCTATTTAATTGCCA
TACAGGGGATAGGTGAACCTTTATACTTTGTTGTTTTTAGATGGGTACTC
GATGAATATCAATGAGATCTTGTTACGATGCTCCAACACTGTGACTGACA
GTAAGTATTCGTGATATGTACCATTGCAATGTCTTCCACGGACCCAGCAG
CTGATTGGTTGCAAGTGACTTATTGACTGATTTTAAGTCACTTACAGCCA
ATCAGCTGTTGGGTCCGTGATGCAATATCAGAAAACATTGCAATGGTGCA
TATCATGAATATAGGAAGACTTCTAAACCGTTTTGGTACTTTTCAGCATT
TAAGATCGCTACCCACTCTGTCTTTTGGTCGCCGAAAAACGTACATGGCT
CAAGCGTTTTGGTCGCTGAACGATTTTCTTATTCTATTGGTACAAAATCA
AAACAGAAACACAGACAAACAAAAGCAAAAACAAATTAGATGATTCGAAT
GTTTTGCTTTGCTTCTCTCTGATTGGCTTCACATATCTGCCCAATAAGTA
AAATATTTTCAAATCTCGTTATTTTCAAAGCAACGAGCCTAAAAAAAGCT
TAATTTATTAAATTTATGCAATAATTAAGCCTTGCGGATTGTTCTTCGAC
CAAAAAAAAGCTGATTGGGAAGCGATCTTAACTGCTGAAAAGTACCTCCT
TCACTAAGAATTAGTATGAAGTATGGGTTGAGCTTTTACACCTGGTTCGG
ATGACATCAAATTTCTGAAGTCTTTGCAGGTCTTTGCTCAAAGATCGAAA
ATACCTTAAATAAACTCTAGATAGAGCAAGTTCGTTCCTGGCTGAAGCAA
AATAATACGTCATCATTACAAGTAGACCACAGTTCAATGTTGACATTTTG
GTCAATCAAGACCAGTCTCTCTCTATTCTCATCATGCTTGAATTGAACAA
AATGATTATCGGTACTGAACTGTGATCTGCTTTGTGTAAATACAGCGCAT
TTTTTTAGTTCCAAGTGCCGTTCCTTGGGCAAGAAAGTGTAGATCTATCT
AGTGTTACATAAGATTTATTTATTTATAAGTTCATGTAAGATGTTTAAGT
TGACCAGATACGGATATTTTACGCTATCGATACCAACTATCGATACCAAC
TATCGATACCAACTATCGATACCAACTATCGATACCAACGATCGATACCA
ACTATCAATACCAACTCAAACCCCTTACAAAATCTCAATTGAATATTATC
CTTTTACGCTTTCTATTATCCTTTCTATTATCCTTTCATCGGATTTTTCT
TAACCAATCTGTACTTGACTTATCCCATTTCTTTCAGATTTTCAAATCGA
ACGAGCGGAACCTGAGTTTGTCAAACTGGAGAAAAAAGCGAATGGTATGC
ATATTTAGTCNCCATTTCTTTCAGATTTTCAAATCGAACGAGCGGAACCT
GAGTTTGTCAAACTGGAGAAAAAAGCGAATGGTATGCATATTTAGTCTTC
ATTTCATTTTCGTTCACTGTTTTAAATCAAAAAAAAGTTAGAAGAGACTG
TTTAGTTGATATTACAATTTATAAGTTTATTAAGAATGAAATTAAAGATT
GGAAAAAGAGATTTTGTCATGTCAATTTTATTGCGTTCATGATATTCTCT
TGACCGACTATGATATCGTTTTATAGTTCATAGTTTAACGATCCCAAAAC
TTCCGATGATGGAAAGAGACACCAGCATAAATATTATAATCATGTGGTAT
TTAACTTAAAGAGTCTTTATATTGTCTTTTGATTTTTCAAAGTTCTGATT
TTGAATAGGATTATGAGATGATTCAATTTATTACTCGGATCGTTGCGTTT
GGTTTATACGGTTCTTATTCCTGCACTTTTTAAACCAAACCAAAACATTT
TTGTTCATAAATACATACACAATAGAATTACTAATCCCATCCAAATAAAA
CCAAAAATAACTGTACCGGAAATCAGTAGCCAGGCTCTCTAACAGTTGTG
GTAGTGTACCAAACATGAAAAACGATAGACATATAATGAAAGGTGTAAAA
ATCTTTGCTTTTCGTTTTCTGTATAGCGAAGACCGTATATCGCTAGTTGC
TTTTCGATATTTGATATAAATGTATGTATAAACGGCGACAAAGATAATGT
TTGTCCCGAATAAACCAATGGACGGAATAATCTTTTGGATCACTTTCCAT
ACTACTGAATCAAAGCTTCCCATGAGATATACACACAGGGTTGCTGCTGA
AAATAGAAGGGATGCCATCCACGTGTAAAATACATATTTCACTCTGTGTA
AATAACAGCTCGAAGTTTCATAACTCAAGTGTAACCATATAGCGAAGAAT
CTTTGCAGCGTCACTAGTATCATACCACTGTACAATGGAATCGTGAGTGA
GATAGTGAGCCCACCAGCTAGTCTAGCATATTGTGGATATTTGACATAGG
TGGTTATGCGAGTCATTGAAAAACAGCATAGAATGATGAAGGAAAGCGAA
ATACTGAGCACCTCGATATTTTCTCTGACTTTGGTGTTTGCATTAAGTAG
AAACCAAACGCCAGTGGCGTGTAGAAGTACAGTTAGTAAGGCCAACGCGA
AAAGCAGTATAGAGAGTGTGTCCCAGCCTGCCATATCTTCTTTGATTGTT
TTATGTTTTTTTTTTTTTGCGCTGATCGCTTCTCTCCTGACTCAAGTGCG
AAAAGCACGCATAATAGAAATCTTTTTGTTAAAATGCGCTCTTCCAGAAA
ATATTCGTACATGGGATTATATTGTCCGGTGGGGGATGGTAGGGAAAAAT
CTACAAAATTTCCCTTCTTGGGAAAAGCTGTTCTGTTTAGGGGTACTTAT
GACTGTCCGGGGGGTCAACTGATGCTTGTCCAGGGGGTTAGCTGTTTTCC
GGGGGGGGTTAAAAGTCACAAATCCGGGGAGAAAATTTCCAATCCTCCAG
CCCCATATTCGATTTTTNTGTGGGGGGGGGGGGGTTAAAAGTCACAAATC
CGGGGAGAAAATTTCCAATCCTCCAGCCCCATATTCGATTTTTCTGGAAG
AGCTCAATGTTAAAATGATAAACCTGGAGGATTGGAAATTTTCTTCTTTT
ATGTCTTCTCAACACTTCTTCCCCTTTTCAAGGTCCCCAACTCTTTACAA
TCATGAAAAAATATCGTAATTTGAAGATTGGAATATCTTTTTGCTTTACG
CTCAATAATTGTTTTTTTCAACAATATTTGCTAAAAATTCCCTTTTTCAG
TAGTTTTTGATGATATGATTCTTCAAAGAGTAAAGCAATATATAGAACAA
TAAACAATACTGTGCGAGAAATATTATAGTATTGCTTTTTTAATGAAAAT
TTTTTACTTGAGCTCGAAAACACATAAAATTAACAATGCTTCGATTTTGG
ATCAATTAAAAATCCTTGATAATTCAAAAGATAACCTTGTGCTCGACACT
TACATTTGAGGCCTCTGCCCGATATCTTAAAATAAGTATTGCTTAAGTTT
GCTATTTCAAACTGTTGGAATAGATAGTTAAATTTTGGTAATAGATAATT
AAATTCTGATAACAGATTTTTAAAATCCCTTGCCTAATTCAGATGTCTAA
TGTTATGGAAGTAATATGGTAGCAATACTGAGTATCTTCTTATTCAATTT
ATCTTAAGTGTAGTATTACATATGCAGGGTGATTAATAAAAAACCGCACC
TCTAGATTTTTTGACGTAACTATTTTTCTGTTCTTCGTATTGTCATCATG
AGACATTCAACACTCATACCCTATTAGATCTGGGCCCGGTTGTTCAAAAG
TGGATTAGCGGCCGATTAGCTTAAGTCCGGATTAAATAGCGATTAGCGCC
GATTAACGAAAATTTGTCTGTTGTTCAAAAAATATCACGATTAAAAAAGG
GATTAACTTAGACTTAAACACCCCAAAACTTAATCCTGCTCGGGAGGTGG
ATTAAGGAAAGATTAAGCTTAAAACAAAGTGAGAAATGGCCGCCATGAAC
ATGATTTTATATGGAAATTTGCAAAGAAGACGTCCAAGAACGGGAGTCTA
CACATTAGATTTGAGGTTTATAGCTGAATATTTTGTGACATCTAATGAAA
ACAAAAGATTTTGCCACCGCATACGGACTAAAACTAATGGGCGATTGTTG
GTCGCTCTTCATATAATTGTATTATAACTTTACACATTAATTATAACTTT
GTATATGTAATCACATGATAACGAGTGCAATTCGAGAATAATTGCACGAG
TGATTTTTTGGACCTACCCCGGTGGGGTGAAGGTCCTATAAATTCACCTC
TGTCCGTTCGTCCGTCCGTCTGTCCGTTCGTTACCAGCTTTTCTCGAGAT
TGAATCATAGGAATCATTTGATTTTTGGTACAAAGGTGCAAAACAGTAGT
GGCCAAAATGTGACGGAGCCCGATTTTCGAAAAAAACGGCTAAAAAACGG
GTTTTTTGGACTTTGTGAAAAATTGGATCATTGAATTTTTTTGATTTTTT
GCATGAAAGTAGGGTACCATCATAGGTAAAAGATGGCTNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNCAATGTTCTTAGTCAAATTACTCAATTTCTTTATGAGATAGAAGTT
TTTTTTGCTCATGAGGGCTTACTTTTGAAGAATATGTGTGTTTAGACATG
AAAATTTGGTTGCTTGTTTGTTATTAATTTTCCGAGTACGAAAGGACGAG
GAAAATTCGAAACAAAAAAATCACGAGTGCAATTTTCGAATTGTACGAGT
TATTATGTGATTACGAGCTACACGCTTTTTCTTTTATAAGAATAACTTCT
ATAAGAATATCAGGGTGAGATTTCGGGTTTAAAACAATAGGCCTATTGTT
TAGAACAATAGAAAAATAAGAATAATGCTCACCCTCAACCAAAGTACACT
ATTCTTATAAAAGAAAAATCGTGTAATCGCACGATTTTTTTTACTACTTT
TTCCCCGTCAGGAAAGTAAATTACACTGAAAGTTTAATATTTTTCTCTTC
TCTTAATGTTTTCCTTTCCTTTTATTGTTTGCTTAAAGATTTTCTTTCTC
GCAAAATGATTTCGAATGCAATTAAAACGTTCGATAAAAAAATGTAAGAA
AAAACATTAAGATCAATTTTGGAAACATTGGCGCTTCATTGAAGAGTGTG
ATTGAGTGTGATTAGCGATTAATTGCTCTCTTTGAAGGCGCGCCAAAGAA
GAAAAAAATAACTCATCGTGCGATTAACACATTAATTATATCTTTACACG
TTAATTATATCTTATCTTTTTTTTACAGAATTGAAAACGATTCTTGGCAA
GATACCAGACGACATCAAAGATCGAACAAAATTCCTACAAACAATCAAGT
TAGTCACTTGTATATTCATTTATAGGAAAGGTTCTCTCTACCAGACTTGA
TATTTGCCAAATCTTTAAAATTTCCCTGTAGGATTTCATCTTTGTCTGTT
TCTGTTTCTGTTTTTAGATTTCTCAAACAGGTCCTTCGTCATTTTCTAGC
CTCTAGCGGAATAGGGCTTTGTCTGGACGACGTTAGATTAGTACCGGTGT
AGGGCTGATAAGGCACATTTTTTAACTTTGCTTATTCTACTATACATTAG
TTTATACACATCTTTAAAAATGCTTTTTGTAGATGTGATCAAATAAATAT
AACAATAGCGTTCAGTTTGAAGTCGTTGTTGTTATTTTCTGCCCGCATAG
TTGGGCCCGACGCGAAGCGGAGTGCGCAAATGGCACTAGAGGGCTAATAA
TCAAACTGCAAGGGCAGAACTAATGACAACAACGAACGAAAACTCAACGC
TATTACTATTATTATTCATATAGGACATTCAAACAACCTTTTTTTCTAGC
GTCAACCAAGTCTTTTCGCTTCAATGCAATCGCTTCAACAAATTTTTAGC
ACCTTGCGAGTGGGCCGCAAATGACCAAAAAGTGTTTTTTTTCTGACGCG
GGCCTGCAAATGACGTTATTGCCCTATACCCTGGCGCTTTAGTTTCCTCA
GCGCGGGTATGACAATTTGAGTCACAAAACCTTTCAATACCGCCCGCCGA
TTGAACCTTTAATGACTTACTTAATGACCGCTATATGGATAATAATAGTT
ATTATGCTCTGCTTCATCTTGGAATCAAACCCAGATCCATTGCTGGGAAG
GCAATAATGCTAACCTTTGCACTGCCGACACAGAGAAATTGCTCAAACAT
TAAGAGAAACAACCTTGTTAAGACTTCGTGACTTTTGACACCATTTTTCA
ATTCTCATTATTTCATTATAGAGACATTGCAAGTGCAATCAAGGAGTTAT
TGGACTCTGTCAATCAAGTCCTTAAAACTTACCAAGATCAAGGGAGAATC
AAAGAATATCGAAAGGTATTATTGGGGTTATTTCAAATTTACATTATGAA
GCGATGGCCGAGTTGTCAAAGACGTCAATGTTACAAAGATAGGGTTCTCG
ACTCTGTACACTTATTTACAAACATGTAGCTTTTTATTCTAAGGTTATGG
TCAAGAGCCCAATTTCTCCTACCCCTCCCTTGCCTAAGATAACTATGATG
TATAAAATACCTCTTGAAGTGAAAACTGCTAATCTTTTGGGCAAAATACA
ATCTTTTGGTGGTTGTCCATCAAAAATTTTCCAAAGCAAGAAGAATATTT
TTCAGCACTAATGAGATACGTCCGCCATGTTGAGACTTGATTATTACGCA
CAAAAAAGTCCCTTCCAATGTTCCGTTCCGTCGTTCCGTTCACCCCGTAA
GAACAATCGAAAGATTGTCTAAAAGATCTAGATTACTGGGTTATCAAACG
TGAAATATAGACTCTATCTGACTATTACCAAATTTTCCTCCTGGTATTCG
GATTACCCATATCAGTGATAATTCAACTGCATAGTTAGTTCAAGCTACAT
TCTGGCTTGGGTAAAATAAAGTTAAAAAACAATACCGGTTTTGAATGGGT
GGTGAATATGAATTATTCGTTGTATAAATTATAACTCCTTCAAATCTTTC
AGCCAGCATTATTTAAAATTTCATTTTATCTTTTATCAAACAGACTTTGG
AGCAGAATAAGCGAGAATTCGTAAAGTATTCAAAAAGCTTCAGTGACACG
TTGAAGCAATACTTCAAAGACCAAAAGTAAGTCTTGAAAGTTTTAAATAG
TATGATTGTCCCCTTATATACAGATTTGATTCCTAATATCAGACCTGTCA
TAACTGGCAAATTCATTGTAAAATTATGTTATTGTAAAATTGATGACAAA
TACAAGATAAAAATTCCTCCTGTAAAATGGGAACATTGCCAGTAGGTCTG
GCGTTGGCTAAATAGCTGCCGAAGACATCAATTTCGATACAAGGCTTCGC
CTTTTACTAACCGGTTGACGTAGGCTGTACTGAAAAATGTTGCCCGAGGT
CCAGTAACGACCGAGCTTACAAGGACCTGATTTGGAGCAGTCTTGCGATA
AACAAGTGCAATATTTTCGGTAGAGCCCGAGTCAAACCGGTAAATCTTGT
ATTTGTTAGCCGTGTCCTGTTGACAGTTGGTTCTCGACCAAAGCTAAGTA
AAACCACGGTCTCTTGAACTTTCTTACCTTCAAGGGGATATTTGGATGAT
TGGTACGCGGCTAATTAGTACCATTTCTCACTTGAGCTTGTACAGCAGGT
TAACATATATACACATTTGTGTTGAGTATTTTTTTTTATAGAAATATCCT
TTTTCATTTTTCAGGCAGAACAGTGTATTTTATAGTGCAAACTGTTTAAT
CAACCAAACCAATAATATTCTACTCGTTTTTCGAATGGTTGGGAAAAATT
GAACACGTGTGCAACATAAGACAAATTACCGGACAGTACAACAGGACACA
TTTTGTTCTTCATTCTTCATTTGTTTGTTATTGTTGATGTTTTACTGAAG
AGTCAAAGAATTGGTTAAAGCTGTTGTACTAACTTTCAGTGGCGGATCTG
AGGGGGGTTCCAAACAATGAAGTATAAGCCCGAAGGGCTAGAAGTCAATC
TCTTTGGTAGGATTTGAAGCCAACAAATCCAAAGTTGCGCGGCCTTGAGC
GACCCGCCTGGTTTTTACACAAATGACAGATTAATTTTGAAAAATATATC
ACTCGAAAACAAAGGAATTGCTAGATTCAATCCGTCATCAAAAATACGGC
GCATATTTTAAGGCTTCAATTTTTCTTGCCTGAGAAAGGTTAGAGATTGA
CCTCTAGCCCTTCGGGCTTGAAACTCAATGGTTCCAAATTTACGACGGAG
AGTCTTCAATTACTTTTAAGGAGTATGGCCAAAAAACCCTCTCCATCATA
TATTTTGAGCCCCCTTTAGATCCGCAACTGACTCTTGTACCGTATACAGT
ATCTTGCTTTGTAACGTTGAACGGTTATTATTGCTCTGGCTTTGTTGTAT
TGGCACGGAGTTTTTCCTTGTAAACTTCAAATTGTACAAACCAAACAAAA
TGTTGACATTCTTTTGGCCCACTGAAATATAAAGTACCTCTGGGAACGGT
AATACAAACATTTGCCTGAGCATGTCATCTGATATGGATCCAGTGGTCGA
AACTTTTGTAGATGTAAACTCAGGTTACAGAAGTGGAATGTGTCATATCT
GAGTAATTGTGAAAAGTAAAAACTGGTACTACTTTGGATATATTGTCCTT
TTTCATTTCCAAAAATATACTGCAGCAACCTGCTGACTGACATCGCATTC
GAACTATGGGGGTGTTTTGGCCTAACGTAATGTCACTGTATCGAGTGAAT
GCACTAAGATGCACTATTGGGAATGTCTTGTAATATTTAAATTTTTGTAT
ATTTTAATGAATTATGCGTGTTTTTAAAGATTTGTATATCATAAAGTAAT
TAAGCTTTTCACTTTTTCCTCAGTTCAAAACCTTTCATTTTTTGTAAACA
CCCCCTTTTCGCTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042809XLOC_042809Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068631-exon-scaffold_486-1575043694:278928..279145TCONS_00068631-exon-scaffold_486-1575043694:278928..279145Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1575043694:278453..278524TCONS_00068631-exon-scaffold_486-1575043694:278453..278524Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1575043694:277993..278050TCONS_00068631-exon-scaffold_486-1575043694:277993..278050Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1575043694:276796..276855TCONS_00068631-exon-scaffold_486-1575043694:276796..276855Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1575043694:275465..275521TCONS_00068631-exon-scaffold_486-1575043694:275465..275521Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1575043694:271398..271467TCONS_00068631-exon-scaffold_486-1575043694:271398..271467Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1575043694:270381..270474TCONS_00068631-exon-scaffold_486-1575043694:270381..270474Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1575043694:269616..269702TCONS_00068631-exon-scaffold_486-1575043694:269616..269702Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1575043694:267830..269027TCONS_00068631-exon-scaffold_486-1575043694:267830..269027Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1510915933:278928..279145TCONS_00068631-exon-scaffold_486-1510915933:278928..279145Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1510915933:278453..278524TCONS_00068631-exon-scaffold_486-1510915933:278453..278524Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1510915933:277993..278050TCONS_00068631-exon-scaffold_486-1510915933:277993..278050Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1510915933:276796..276855TCONS_00068631-exon-scaffold_486-1510915933:276796..276855Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1510915933:275465..275521TCONS_00068631-exon-scaffold_486-1510915933:275465..275521Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1510915933:271398..271467TCONS_00068631-exon-scaffold_486-1510915933:271398..271467Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1510915933:270381..270474TCONS_00068631-exon-scaffold_486-1510915933:270381..270474Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1510915933:269616..269702TCONS_00068631-exon-scaffold_486-1510915933:269616..269702Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1510915933:267830..269027TCONS_00068631-exon-scaffold_486-1510915933:267830..269027Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1491911889:278928..279145TCONS_00068631-exon-scaffold_486-1491911889:278928..279145Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1491911889:278453..278524TCONS_00068631-exon-scaffold_486-1491911889:278453..278524Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1491911889:277993..278050TCONS_00068631-exon-scaffold_486-1491911889:277993..278050Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1491911889:276796..276855TCONS_00068631-exon-scaffold_486-1491911889:276796..276855Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1491911889:275465..275521TCONS_00068631-exon-scaffold_486-1491911889:275465..275521Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1491911889:271398..271467TCONS_00068631-exon-scaffold_486-1491911889:271398..271467Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1491911889:270381..270474TCONS_00068631-exon-scaffold_486-1491911889:270381..270474Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1491911889:269616..269702TCONS_00068631-exon-scaffold_486-1491911889:269616..269702Clytia hemisphaericaexon
TCONS_00068631-exon-scaffold_486-1491911889:267830..269027TCONS_00068631-exon-scaffold_486-1491911889:267830..269027Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_486supercontigscaffold_486:267830..279145 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
48.7781	46.1456	67.7555	66.4048	10.4179	8.75024	23.3962	26.6546	29.3168	23.1324	20.996	25.3622	17.9592	17.085	20.5763	21.1986	30.4193	33.3793	20.3522	25.2802	31.5713	27.51	26.5968	27.719	14.8584	15.5326	28.976	24.9127	18.5385	17.5437
Blast
[Close]
BLAST of TCONS_00068631 vs. Swiss-Prot (Human)
Match: PDC10 (Programmed cell death protein 10 OS=Homo sapiens GN=PDCD10 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.277e-50
Identity = 99/179 (55.31%), Postives = 118/179 (65.92%), Query Frame = 3 
Query:  255 SSLNELIQAFKVAEECIPGITQEVLAGILRADGYSMNINEILLRCSNTVTDNFQIERAEPEFVKLEKKANELKTILGKIPDDIKDRTKFLQTIKDIASAIKELLDSVNQVLKTYQDQGRIKEYRKTLEQNKREFVKYSKSFSDTLKQYFKDQK*NSVFYSANCLINQTNNILLVFRMVG 791
            S+   L  AF  AE+  PG+TQ+++  IL      +N  E LLR +    + + IER EPEF  L +KA  LK IL KIPD+I DR +FLQTIKDIASAIKELLD+VN V K YQ Q      R+ LE  K+EFVKYSKSFSDTLK YFKD K  +VF SAN LI+QTN IL  F+ V 
Sbjct:   39 SAAQTLRAAFIKAEKENPGLTQDIIMKILEKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDEINDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQN-----RRALEHQKKEFVKYSKSFSDTLKTYFKDGKAINVFVSANRLIHQTNLILQTFKTVA 212
The following BLAST results are available for this feature:
BLAST of TCONS_00068631 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PDC101.277e-5055.31Programmed cell death protein 10 OS=Homo sapiens G... [more]
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