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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068609 ID=TCONS_00068609|Name=TCONS_00068609|organism=Clytia hemisphaerica|type=transcript|length=504bp
tcaTCTACAAAAGTTCAGTTCATCTTCAACAACTGAAAATTAtcctttta
aaattaaaatgaaattaacctAAATCACTATTGAGCTAAAATTTAGATAA
acaaaataattaataaaacaTTCCAAAATAGATATTAGTGTtatcaataa
attcaaaattcaaatataaACATATAAATTTGATCAACTAATTTTATCGT
TAAAATCAttatcagaaaaataaattagaTTGACTGGTACCTGCTGGTAC
ATAATATATTAAAATCTGAAATGCGAAGTCTAAAGGGATTTCGACattga
aaaaataaagaactttttcttattaaaaattttGTCCGACACAGAATCAT
TTGATTTCAAGATTAGCATCTGGATGTTCGGAATACTCCCCTTTGTAGCG
ATCAAATAAATCTTTGAGTCGTTTGACATACAGGTCATGTAGCTTTTGAA
CTTCTCCTGCGCTCGGTTCGTCACGTTTTGACACTGATATCGGAGCGCCA
ACTA Run BLAST on NCBI transcript from alignment at scaffold_486:77640..79009+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068609 ID=TCONS_00068609|Name=TCONS_00068609|organism=Clytia hemisphaerica|type=transcript|length=1370bp|location=Sequence derived from alignment at scaffold_486:77640..79009+ (Clytia hemisphaerica)
tcaTCTACAAAAGTTCAGTTCATCTTCAACAACTGAAAATTAtcctttta
aaattaaaatgaaattaacctAAATCACTATTGAGCTAAAATTTAGATAA
acaaaataattaataaaacaTTCCAAAATAGATATTAGTGTtatcaataa
attcaaaattcaaatataaACATATAAATTTGATCAACTAATTTTATCGT
TAAAATCAttatcagaaaaataaattagaTTGACTGGTACCTGCTGGTAC
ATAATATATTAAAATCTGAAATGCGAAGTCTAAAGGGATTTCGACATTGA
AAAAGTGAAGAACTTTTTCTTACCGGgtgcgtcagaaaaaactttggacg
tttggtgagccactgggaccgagcaaagtctttttgaaactcaaaaccac
ttttattagaaagaggatagtCTAACNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTTTTACGGGggatttttaatcaaa
aatcatatctttaaaCTCTTTCCACGAGAAATGTTTGCATAAACGCAAAA
TCAAATCTCGCAGAAATTATTCCAATTGAAGTATTGACTACTACCCAACA
ATCGAATACATTAACATTGATTTCTGAGTTATTTAAAAAGATACCGAAGT
TGAGCAGATGGGTACAACGTAGCAGTTCAAATGGTTTTGAGTTATGAGCG
ACttttataaaccctctaaatactATTTCAAAAAGTTAGTAGTATTatcc
aaaataataaaagaaatagAAACAACCTTTCAAACAGTATATAAAATTCA
TATTGCAAACTATACATATAAtcttataatatataaaataatttataaaa
acaataaaattcattaaaaatcaTCTACAAAAGTTCAGTTCATCTTCAAC
AACTGAAAATTAtccttttaaaattaaaacGAAATTAACCTAAATCACTA
TTGAGCTAAAATTTAGATAAacaaaataattaataaaacaTTCCAAAATA
GATACATATTAGTGTTATCAATAAATTCAAAACTCAAATATAAACATATA
AATTTGATCAACTAATTTTATCGTTTAAATCAttatcagaaaaataaatt
agaTTGACTAGTACATAAtatatattaaaatttgaaatgcgAAGTCTAAA
GGGATTTCGacattgaaaaaataaagaactttttcttattaaaaattttG
TCCGACACAGAATCATTTGATTTCAAGATTAGCATCTGGATGTTCGGAAT
ACTCCCCTTTGTAGCGATCAAATAAATCTTTGAGTCGTTTGACATACAGG
TCATGTAGCTTTTGAACTTCTCCTGCGCTCGGTTCGTCACGTTTTGACAC
TGATATCGGAGCGCCAACTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068609-exon-scaffold_486-1491911889:77640..77934 | TCONS_00068609-exon-scaffold_486-1491911889:77640..77934 | Clytia hemisphaerica | exon |
| TCONS_00068609-exon-scaffold_486-1510915933:77640..77934 | TCONS_00068609-exon-scaffold_486-1510915933:77640..77934 | Clytia hemisphaerica | exon |
| TCONS_00068609-exon-scaffold_486-1575043694:77640..77934 | TCONS_00068609-exon-scaffold_486-1575043694:77640..77934 | Clytia hemisphaerica | exon |
| TCONS_00068609-exon-scaffold_486-1491911889:78801..79009 | TCONS_00068609-exon-scaffold_486-1491911889:78801..79009 | Clytia hemisphaerica | exon |
| TCONS_00068609-exon-scaffold_486-1510915933:78801..79009 | TCONS_00068609-exon-scaffold_486-1510915933:78801..79009 | Clytia hemisphaerica | exon |
| TCONS_00068609-exon-scaffold_486-1575043694:78801..79009 | TCONS_00068609-exon-scaffold_486-1575043694:78801..79009 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_486 | supercontig | scaffold_486:77640..79009 + |
Blast
The following BLAST results are available for this feature:
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