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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068607 ID=TCONS_00068607|Name=TCONS_00068607|organism=Clytia hemisphaerica|type=transcript|length=713bp
ttcaaaatagATCAGTgcatcaaaagaaaatcaaaattaaaattataaac
aaataaatttgATCAACTAATTATTGAAAAGTAAAGATAAAAATGTTAGG
TATACAATTTTTATCAGGCCAAACCTTTTTTTGCTCACCTTGTAGTATAC
AAGAAACTTTAgctgatcatttaaaaaagttatccTTGATCGACTTTGGT
AACTTCATTTGTACCAAATCATTGATGGAATAATTTAACAATACAACTTT
AAGTGCTGAATGAAACAGTGGCTCCACAAACCTtgttttcaatttgaaaa
ctttCCCAAACAATTTATTGTCAACGTCGCTATAAAACACCACTACTact
tcatttgaaaaaatactacaccGTACAACAGTTTATTTTTCAATTCCAAG
AAACCGGAATAAAGATTCTGGAAGATTTTGATTGATTATTTCTTCCTCAT
TGAACGAGGTCAAAACAGCAAGACGCGCAAAACATTTCAGAGTTAAGCCA
ATATTTGGGAAAACAATCTTATGAGCTTTGAACAACATCTCATCTTGGCC
ACCCTCCTCGTGATTGCTTACATAGAACCCAGTATAAACCAATTCCTTTA
AATTCCAATTTAATGAAAACGTCTGCATTTCATCATTTGGATTTACATTA
ATGTCACTTGAAATCTCTTTGCTATTCAAGTCAAACAGAAAAAATTTCGT
CGATGAATTGTCT Run BLAST on NCBI transcript from alignment at scaffold_486:58885..59719+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068607 ID=TCONS_00068607|Name=TCONS_00068607|organism=Clytia hemisphaerica|type=transcript|length=835bp|location=Sequence derived from alignment at scaffold_486:58885..59719+ (Clytia hemisphaerica)
ttcaaaatagATCAGTgcatcaaaagaaaatcaaaattaaaattataaac
aaataaatttgATCAACTAATTATTGAAAAGTAAAGATAAAAATGTTAGG
TATACAATTTTTATCAGGCCAAACCTTTTTTTGCTCACCTTGTAGTATAC
AAGAAACTTTAgctgatcatttaaaaaagttatccTTGATCGACTTTGGT
AACTTCATTTGTACCAAATCATTGATGGAATAATTTAACAATACAACTTT
AAGTGCTGAATGAAACAGTGGCTCCACAAACCTtgttttcaatttgaaaa
ctttCCCAAACAATTTATTGTCAACGTCGCTATAAAACACCACTACTact
tcatttgaaaaaatactacaccGTACAACAGTTTATTTTTCAATTCCAAG
AAACCGGAATAAAGATTCTGGAAGATTTTGATTGATTATTTCTTCCTCAT
TGAACGAGGTCAAAACAGCAAGACGCGCAAAACATTTCAGAGTTAAGCCA
ATATTTGGGAAAACAATCTTATGAGCTTTGAACAACATCTCATCTTGGCC
ACCCTCCTCGTGATTGCTTACATAGAACCCAGTATAAACCAATTCCTTTN
TAAACATTTCAGAGTTAAGCCAATATTTGGGATAACAATCTTATGAGCTT
TAAACAACATCTCATCTTGGCCACCCTCCTCGTGATTGCTTACATAGAAC
CCAGTATAAACCAATTCCTTTAAATTCCAATTTAATGAAAACGTCTGCAT
TTCATCATTTGGATTTACATTAATGTCACTTGAAATCTCTTTGCTATTCA
AGTCAAACAGAAAAAATTTCGTCGATGAATTGTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068607-exon-scaffold_486-1491911889:58885..59420 | TCONS_00068607-exon-scaffold_486-1491911889:58885..59420 | Clytia hemisphaerica | exon |
| TCONS_00068607-exon-scaffold_486-1510915933:58885..59420 | TCONS_00068607-exon-scaffold_486-1510915933:58885..59420 | Clytia hemisphaerica | exon |
| TCONS_00068607-exon-scaffold_486-1575043694:58885..59420 | TCONS_00068607-exon-scaffold_486-1575043694:58885..59420 | Clytia hemisphaerica | exon |
| TCONS_00068607-exon-scaffold_486-1491911889:59543..59719 | TCONS_00068607-exon-scaffold_486-1491911889:59543..59719 | Clytia hemisphaerica | exon |
| TCONS_00068607-exon-scaffold_486-1510915933:59543..59719 | TCONS_00068607-exon-scaffold_486-1510915933:59543..59719 | Clytia hemisphaerica | exon |
| TCONS_00068607-exon-scaffold_486-1575043694:59543..59719 | TCONS_00068607-exon-scaffold_486-1575043694:59543..59719 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_486 | supercontig | scaffold_486:58885..59719 + |
Blast
The following BLAST results are available for this feature:
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