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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068602 ID=TCONS_00068602|Name=TCONS_00068602|organism=Clytia hemisphaerica|type=transcript|length=1285bp
ATCCCTGCATCTGAAGAATCGAACGAAATGACTTCTGCTTCAACAAATAA
GGATCAAGTCGAGAGTCCGTTGAATGCAGATTCCCAAACCCTCAGTCCAA
AGGACCAAAATCAGGATCCAGCTGAGCAAATGTCTAGAAAACGTCGAAAT
ATCGAAGAAAGTGACGACACTGTTCCTACTAATAAGTTTGCTAAAATTGA
GGAACGTTTCGACCTGTCTAACAAAGACAAAACAAACTCTTGGAGTATTA
AATCTGATCTTGCGGAGTATGCCATTAAACAGATGAACTCCTACATTAAT
GATGGTGATATAAAGGATGAAATTTTATATCAGTTTCCGATACCAGACAA
TCTAAATAACAAAAAGGAAATGGATTCCAATATTAGATCGCTTCTATCTG
AAATGAGAGCGAAAGAAACTTTGTCGCTTGACAAAGCGTTTGAATCAGTC
CAAGACAAAGTCTTGAATGTTTTTGGACCCCTGTCCCAAGTATGGGAATT
CTTGGAGATCCAGAAGGATCAGGCAATCGAGCAGACCTCAAACATGTCGG
AGGAGGAGTTTACATCAGACATGGACGACATGCTTCGCTCAGCAAAAGAC
TGTGCAAGACTGATAGACATGACAGTCACCATGCTTGGACAAGCCTTTAA
CAGCTTATCTTATTACAGAAGAAGGAATGCATTGTTGTCAATCCTCAAAG
GGGACAAAACGAAAGTGAAGGAAATGATGAAGGAGAACAAAGATATCCTT
CAAGAGAATACGTCTTCTAATCGCCTTTTTGGAgagaaatttgatgaaaa
gatGGTGGAAGTCGTTAAACTcaagaagaaatcaaaagaatttttcaatg
tAATGGATGGCAAAACGAAATCGTCCGTTAATAAACAGAACAGAATTGGG
CTCAACCAGTCCTTTCGTGGGGGCCCCCTACCCGGTACAAGTGGAAGGGG
GCAGAATTTTTTCCAAGCCAACCTCAAAGTGGAAACAACAGAATTGGTAA
GTCCAACTTCTTCTTCATTACAAACAAATTTAGTACCAATTTTGTCTGTT
CAGGACTATCCAAAAGTCCATCGATTAGTGAAAAACCTGTTTCCAGTCAA
GTTGAGTCAGAGTCTACCACTTGCCGGAAGGgtaaaatttttcatcaaaa
actgGGAAAAACTGACAAAGGACCCCTCAGTTCTAGAGATAGTTCAAGGT
TacaaaattccatttatagaCACTCCACATCAAACTTTTTTGCCCAAAGC
AGGCAACTTATCCAAAGAAGAAAAGGAACTAGTGG Run BLAST on NCBI transcript from alignment at scaffold_486:36834..38118+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068602 ID=TCONS_00068602|Name=TCONS_00068602|organism=Clytia hemisphaerica|type=transcript|length=1285bp|location=Sequence derived from alignment at scaffold_486:36834..38118+ (Clytia hemisphaerica)
ATCCCTGCATCTGAAGAATCGAACGAAATGACTTCTGCTTCAACAAATAA
GGATCAAGTCGAGAGTCCGTTGAATGCAGATTCCCAAACCCTCAGTCCAA
AGGACCAAAATCAGGATCCAGCTGAGCAAATGTCTAGAAAACGTCGAAAT
ATCGAAGAAAGTGACGACACTGTTCCTACTAATAAGTTTGCTAAAATTGA
GGAACGTTTCGACCTGTCTAACAAAGACAAAACAAACTCTTGGAGTATTA
AATCTGATCTTGCGGAGTATGCCATTAAACAGATGAACTCCTACATTAAT
GATGGTGATATAAAGGATGAAATTTTATATCAGTTTCCGATACCAGACAA
TCTAAATAACAAAAAGGAAATGGATTCCAATATTAGATCGCTTCTATCTG
AAATGAGAGCGAAAGAAACTTTGTCGCTTGACAAAGCGTTTGAATCAGTC
CAAGACAAAGTCTTGAATGTTTTTGGACCCCTGTCCCAAGTATGGGAATT
CTTGGAGATCCAGAAGGATCAGGCAATCGAGCAGACCTCAAACATGTCGG
AGGAGGAGTTTACATCAGACATGGACGACATGCTTCGCTCAGCAAAAGAC
TGTGCAAGACTGATAGACATGACAGTCACCATGCTTGGACAAGCCTTTAA
CAGCTTATCTTATTACAGAAGAAGGAATGCATTGTTGTCAATCCTCAAAG
GGGACAAAACGAAAGTGAAGGAAATGATGAAGGAGAACAAAGATATCCTT
CAAGAGAATACGTCTTCTAATCGCCTTTTTGGAgagaaatttgatgaaaa
gatGGTGGAAGTCGTTAAACTcaagaagaaatcaaaagaatttttcaatg
tAATGGATGGCAAAACGAAATCGTCCGTTAATAAACAGAACAGAATTGGG
CTCAACCAGTCCTTTCGTGGGGGCCCCCTACCCGGTACAAGTGGAAGGGG
GCAGAATTTTTTCCAAGCCAACCTCAAAGTGGAAACAACAGAATTGGTAA
GTCCAACTTCTTCTTCATTACAAACAAATTTAGTACCAATTTTGTCTGTT
CAGGACTATCCAAAAGTCCATCGATTAGTGAAAAACCTGTTTCCAGTCAA
GTTGAGTCAGAGTCTACCACTTGCCGGAAGGgtaaaatttttcatcaaaa
actgGGAAAAACTGACAAAGGACCCCTCAGTTCTAGAGATAGTTCAAGGT
TacaaaattccatttatagaCACTCCACATCAAACTTTTTTGCCCAAAGC
AGGCAACTTATCCAAAGAAGAAAAGGAACTAGTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068602-exon-scaffold_486-1491911889:36834..38118 | TCONS_00068602-exon-scaffold_486-1491911889:36834..38118 | Clytia hemisphaerica | exon |
| TCONS_00068602-exon-scaffold_486-1510915933:36834..38118 | TCONS_00068602-exon-scaffold_486-1510915933:36834..38118 | Clytia hemisphaerica | exon |
| TCONS_00068602-exon-scaffold_486-1575043694:36834..38118 | TCONS_00068602-exon-scaffold_486-1575043694:36834..38118 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_486 | supercontig | scaffold_486:36834..38118 + |
Blast
The following BLAST results are available for this feature:
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