TCONS_00068588 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068588
Unique NameTCONS_00068588
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length157

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068588 ID=TCONS_00068588|Name=TCONS_00068588|organism=Clytia hemisphaerica|type=transcript|length=157bp
TCCCAATGAAAATCACTACAAGAGAAATCTCCTTAGTTTTGACATGGAAA
AGATAAAACGCTCTCACACGACGCCGAATCAGAAAATAGTAATATTTTAT
CATAAAACcaaattaattaaattaaattaattgaatAACTAGAACATATT
AACATGG
Run BLAST on NCBI

transcript from alignment at scaffold_485:647370..647526

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068588 ID=TCONS_00068588|Name=TCONS_00068588|organism=Clytia hemisphaerica|type=transcript|length=157bp|location=Sequence derived from alignment at scaffold_485:647370..647526 (Clytia hemisphaerica)
CCATGTTAATATGTTCTAGTTattcaattaatttaatttaattaatttgG
TTTTATGATAAAATATTACTATTTTCTGATTCGGCGTCGTGTGAGAGCGT
TTTATCTTTTCCATGTCAAAACTAAGGAGATTTCTCTTGTAGTGATTTTC
ATTGGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042787XLOC_042787Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068588-exon-scaffold_485-1491911889:647370..647526TCONS_00068588-exon-scaffold_485-1491911889:647370..647526Clytia hemisphaericaexon
TCONS_00068588-exon-scaffold_485-1510915933:647370..647526TCONS_00068588-exon-scaffold_485-1510915933:647370..647526Clytia hemisphaericaexon
TCONS_00068588-exon-scaffold_485-1575043694:647370..647526TCONS_00068588-exon-scaffold_485-1575043694:647370..647526Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_485supercontigscaffold_485:647370..647526 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068588 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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