TCONS_00068573 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068573
Unique NameTCONS_00068573
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length279

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068573 ID=TCONS_00068573|Name=TCONS_00068573|organism=Clytia hemisphaerica|type=transcript|length=279bp
AGTCGCTTCAATCCATTTTTTatccttattttctttttcaaggaaacGCT
TTATCGTTTTCGTTTGCGACTCAAGATGTTTCTTTGTTATTTCTGAATAA
CTTGATTTTTCACAAGCAATTGTATTCACAGACGAAGATTTCTTGTTTgc
gattttatttattttgcctTCCAGCACGTCAATTCTTTTATTGAAGGTGT
TTTCAATTTCTGCGACTGCTTTATTCACATTGTTAGTTGACACTTTAGCC
TTCAAATTTGAAATGTCCTCCCGTTGTGC
Run BLAST on NCBI

transcript from alignment at scaffold_485:297334..297612

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068573 ID=TCONS_00068573|Name=TCONS_00068573|organism=Clytia hemisphaerica|type=transcript|length=279bp|location=Sequence derived from alignment at scaffold_485:297334..297612 (Clytia hemisphaerica)
GCACAACGGGAGGACATTTCAAATTTGAAGGCTAAAGTGTCAACTAACAA
TGTGAATAAAGCAGTCGCAGAAATTGAAAACACCTTCAATAAAAGAATTG
ACGTGCTGGAaggcaaaataaataaaatcgcAAACAAGAAATCTTCGTCT
GTGAATACAATTGCTTGTGAAAAATCAAGTTATTCAGAAATAACAAAGAA
ACATCTTGAGTCGCAAACGAAAACGATAAAGCgtttccttgaaaaagaaa
ataaggatAAAAAATGGATTGAAGCGACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042772XLOC_042772Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068573-exon-scaffold_485-1491911889:297334..297612TCONS_00068573-exon-scaffold_485-1491911889:297334..297612Clytia hemisphaericaexon
TCONS_00068573-exon-scaffold_485-1510915933:297334..297612TCONS_00068573-exon-scaffold_485-1510915933:297334..297612Clytia hemisphaericaexon
TCONS_00068573-exon-scaffold_485-1575043694:297334..297612TCONS_00068573-exon-scaffold_485-1575043694:297334..297612Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_485supercontigscaffold_485:297334..297612 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.18033	0.736141	5.66236	1.27288	0.014076	0	0	0	1.42389	0	6.98206	0.804249	1.06674	1.38389	1.00908	1.51506	0.962427	0	0	0.557205	0.913102	0.969807	1.69734	0.693471	0	0	1.12407	2.96619	0	2.37219
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068573 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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