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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068569 ID=TCONS_00068569|Name=TCONS_00068569|organism=Clytia hemisphaerica|type=transcript|length=858bp
TTTACAAAATAAAGGATAACTGTCACTCTTTGGGTTTGGACTATAATTTG
GAAAAGTACGAACAACAACTGCCTTTTTCCtcttttgaatctttttgtCT
TTAACACTTATTTTCCAGTTCGAAACAAAATCTATGAGGTTACTTTGCCT
AATCTCATTGTCTTCATGAACATATCTGGAATCATAATCATCTAAGAAAG
AGGTTTTGGTTTCAACGCCTTCATTGTCAATTTTCATTTGTCTTGATCCC
TCAAGAGAGCAACTTACAACATCAAATGAAGAGCAATGTAGTTTCAAAGA
CATAATTTGATGCATTACTTCTTGAGCACTAAAGTCTCTTTCACCGACAG
ATCTAATAAtcagttttcgaaaaatattaccAGAAGTTTCCTTTCCTGAA
ATATTACCAATGACAGATGTAAACGCTTCTTTTGCGACGTCAGATATCTT
TTCTGCTTTTGATGCATACTTGGCAATATAATTCAAGCAAGCATTGTGGT
CAAGGATAATTTGTATATCGCATTTAGCCCTCCATGATTGTAATTGAAGC
TGTTGATGTCTATTCATTCTAGGATCATTTCTTTTCAGAACAATGTTTGG
AACATACTTTTCACCGCCTCCcttcaattttactttttcaaaggttAAAT
GTGTTTTCTCGCAGCATTCAAAAGGAAATTTAAAACGATATTCCTGTTTG
TCATTCTTAGTTCTTAGACAATAGGCTGAACTACATTTTGTATGCCGTTG
CGCGCTATTTGCTAGATCTATGTAATCTTGTTCTAAATCCTCTTCAGGTA
TATCCTCAAGTCTTTTTTTGCATGGATGAACATTTGGCTTTTCCCATTCA
TCAACANN Run BLAST on NCBI protein sequence of TCONS_00068569-protein >TCONS_00068569-protein ID=TCONS_00068569-protein|Name=TCONS_00068569-protein|organism=Clytia hemisphaerica|type=polypeptide|length=286bp
XVDEWEKPNVHPCKKRLEDIPEEDLEQDYIDLANSAQRHTKCSSAYCLRT
KNDKQEYRFKFPFECCEKTHLTFEKVKLKGGGEKYVPNIVLKRNDPRMNR
HQQLQLQSWRAKCDIQIILDHNACLNYIAKYASKAEKISDVAKEAFTSVI
GNISGKETSGNIFRKLIIRSVGERDFSAQEVMHQIMSLKLHCSSFDVVSC
SLEGSRQMKIDNEGVETKTSFLDDYDSRYVHEDNEIRQSNLIDFVSNWKI
SVKDKKIQKRKKAVVVRTFPNYSPNPKSDSYPLFCK Run BLAST on NCBI transcript from alignment at scaffold_485:287600..288457 Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068569 ID=TCONS_00068569|Name=TCONS_00068569|organism=Clytia hemisphaerica|type=transcript|length=858bp|location=Sequence derived from alignment at scaffold_485:287600..288457 (Clytia hemisphaerica)
NNTGTTGATGAATGGGAAAAGCCAAATGTTCATCCATGCAAAAAAAGACT
TGAGGATATACCTGAAGAGGATTTAGAACAAGATTACATAGATCTAGCAA
ATAGCGCGCAACGGCATACAAAATGTAGTTCAGCCTATTGTCTAAGAACT
AAGAATGACAAACAGGAATATCGTTTTAAATTTCCTTTTGAATGCTGCGA
GAAAACACATTTaacctttgaaaaagtaaaattgaagGGAGGCGGTGAAA
AGTATGTTCCAAACATTGTTCTGAAAAGAAATGATCCTAGAATGAATAGA
CATCAACAGCTTCAATTACAATCATGGAGGGCTAAATGCGATATACAAAT
TATCCTTGACCACAATGCTTGCTTGAATTATATTGCCAAGTATGCATCAA
AAGCAGAAAAGATATCTGACGTCGCAAAAGAAGCGTTTACATCTGTCATT
GGTAATATTTCAGGAAAGGAAACTTCTggtaatatttttcgaaaactgaT
TATTAGATCTGTCGGTGAAAGAGACTTTAGTGCTCAAGAAGTAATGCATC
AAATTATGTCTTTGAAACTACATTGCTCTTCATTTGATGTTGTAAGTTGC
TCTCTTGAGGGATCAAGACAAATGAAAATTGACAATGAAGGCGTTGAAAC
CAAAACCTCTTTCTTAGATGATTATGATTCCAGATATGTTCATGAAGACA
ATGAGATTAGGCAAAGTAACCTCATAGATTTTGTTTCGAACTGGAAAATA
AGTGTTAAAGacaaaaagattcaaaagaGGAAAAAGGCAGTTGTTGTTCG
TACTTTTCCAAATTATAGTCCAAACCCAAAGAGTGACAGTTATCCTTTAT
TTTGTAAA Coding sequence (CDS) from alignment at scaffold_485:287600..288457 >TCONS_00068569 ID=TCONS_00068569|Name=TCONS_00068569|organism=Clytia hemisphaerica|type=CDS|length=858bp|location=Sequence derived from alignment at scaffold_485:287600..288457 (Clytia hemisphaerica)
NNTGTTGATGAATGGGAAAAGCCAAATGTTCATCCATGCAAAAAAAGACT
TGAGGATATACCTGAAGAGGATTTAGAACAAGATTACATAGATCTAGCAA
ATAGCGCGCAACGGCATACAAAATGTAGTTCAGCCTATTGTCTAAGAACT
AAGAATGACAAACAGGAATATCGTTTTAAATTTCCTTTTGAATGCTGCGA
GAAAACACATTTaacctttgaaaaagtaaaattgaagGGAGGCGGTGAAA
AGTATGTTCCAAACATTGTTCTGAAAAGAAATGATCCTAGAATGAATAGA
CATCAACAGCTTCAATTACAATCATGGAGGGCTAAATGCGATATACAAAT
TATCCTTGACCACAATGCTTGCTTGAATTATATTGCCAAGTATGCATCAA
AAGCAGAAAAGATATCTGACGTCGCAAAAGAAGCGTTTACATCTGTCATT
GGTAATATTTCAGGAAAGGAAACTTCTggtaatatttttcgaaaactgaT
TATTAGATCTGTCGGTGAAAGAGACTTTAGTGCTCAAGAAGTAATGCATC
AAATTATGTCTTTGAAACTACATTGCTCTTCATTTGATGTTGTAAGTTGC
TCTCTTGAGGGATCAAGACAAATGAAAATTGACAATGAAGGCGTTGAAAC
CAAAACCTCTTTCTTAGATGATTATGATTCCAGATATGTTCATGAAGACA
ATGAGATTAGGCAAAGTAACCTCATAGATTTTGTTTCGAACTGGAAAATA
AGTGTTAAAGacaaaaagattcaaaagaGGAAAAAGGCAGTTGTTGTTCG
TACTTTTCCAAATTATAGTCCAAACCCAAAGAGTGACAGTTATCCTTTAT
TTTGTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068569-exon-scaffold_485-1491911889:287600..288457 | TCONS_00068569-exon-scaffold_485-1491911889:287600..288457 | Clytia hemisphaerica | exon |
| TCONS_00068569-exon-scaffold_485-1510915933:287600..288457 | TCONS_00068569-exon-scaffold_485-1510915933:287600..288457 | Clytia hemisphaerica | exon |
| TCONS_00068569-exon-scaffold_485-1575043694:287600..288457 | TCONS_00068569-exon-scaffold_485-1575043694:287600..288457 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_485 | supercontig | scaffold_485:287600..288457 . |
Blast
The following BLAST results are available for this feature:
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