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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068541 ID=TCONS_00068541|Name=TCONS_00068541|organism=Clytia hemisphaerica|type=transcript|length=433bp
CTATACATAAATACTTTCTACTCAGCTCAAAGAACTAGGACTGGCTTCAT
TGAAGATCCAGAGAAAGCTATTAAAGAAGTAACATCAGATGTAACCGAGT
AGCTCTCAAACAATTTGAACCAAGATAATCTGAAACTGAATAGAACAAAA
NGAACATCAGATGTAACCGATTAGCTCTCAAACAGTTTGAACCAAAATAA
TCTGAAACTGAATAGAACAATGAATGGCAATTAgGTTGATCACCCCATAG
CGCTGGACTTGAGAATTAAAGCTAAACCCAAGTATTTTTTACTTAACTCA
AAGAACCAGGACTGGCTTCATTGAGGATCCAGAGAAAGTGAACAGGAGGA
ACATCCCATGAAGCCGAATAAGCTCTTCGTCTTGAACAATTGGAACTGAA
GAATCCAAAGCTGAATAGAACAATATTAATGGC Run BLAST on NCBI transcript from alignment at scaffold_485:379173..380316- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068541 ID=TCONS_00068541|Name=TCONS_00068541|organism=Clytia hemisphaerica|type=transcript|length=1144bp|location=Sequence derived from alignment at scaffold_485:379173..380316- (Clytia hemisphaerica)
CTATACATAAATACTTTCTACTCAGCTCAAAGAACTAGGACTGGCTTCAT
TGAAGATCCAGAGAAAGCTATTAAAGAAGTAACATCAGATGTAACCGAGT
AGCTCTCAAACAATTTGAACCAAGATAATCTGAAACTGAATAGAACAAAA
NGAACATCAGATGTAACCGATTAGCTCTCAAACAGTTTGAACCAAAATAA
TCTGAAACTGAATAGAACAATGAATGGCAATTAGGTATTGATTTTTTAAT
TGATATGATATTTTTAATGGGATAACCTCTAGCTGGTTTTACTAATTCTT
TTAAGACTGTTGTCAGGTATATCCGTGCGTCAAAGGTTGTTCTAACGCCC
AGTTTTAATATGAAACTTCATTTTCCACTCAATTTTGAGAATCATAATTT
GGCATTTTGGTTCCACAGTTTGAAGTTTACCACAGGGTAACTTTTTGTCA
ATGTAGGTTCGGGCAGCAAATTTCGTCAAAATCATTACAATTTGTGTCTT
TTTGTTAAATTCCTTTTAAGGTTACAAAACTATTACTCTATGAATCTTAG
AGAAATCACCTATAGTGTTGGACTTGAGAATTAAAACTATACCCAAATAT
TTTCTACTACTAACTCAAAGAGTCGATTTCAGTCGATTTCGAGCATTGTA
ATTTGGCATATTTTCGGCTTGACTGAGGAAAAATTGTAATTTTCTTTTGT
CAGCGAAATTACTGAGTTGACAAAAGAAAAGATGCTTCAAAATTGATAAA
AATTGATTATTTTGAGAGTGTAATCGTTTTACAAGTATTTTTTGCCATCC
ACAAAGTCAAAAGTTTCACAAAATTTGATCCTCTAGTGAATTAATTTGAA
GTTACCCTTCGGGCAACACTTTGTTAATCTAAGTCTGGGCAACACATTTT
CCAAAATGATCACAATTTTCACATCGCTTTCGTATTCCTTCTAAGGTTGA
TCACCCCATAGCGCTGGACTTGAGAATTAAAGCTAAACCCAAGTATTTTT
TACTTAACTCAAAGAACCAGGACTGGCTTCATTGAGGATCCAGAGAAAGT
GAACAGGAGGAACATCCCATGAAGCCGAATAAGCTCTTCGTCTTGAACAA
TTGGAACTGAAGAATCCAAAGCTGAATAGAACAATATTAATGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068541-exon-scaffold_485-1575043694:380083..380316 | TCONS_00068541-exon-scaffold_485-1575043694:380083..380316 | Clytia hemisphaerica | exon |
| TCONS_00068541-exon-scaffold_485-1575043694:379173..379371 | TCONS_00068541-exon-scaffold_485-1575043694:379173..379371 | Clytia hemisphaerica | exon |
| TCONS_00068541-exon-scaffold_485-1510915933:380083..380316 | TCONS_00068541-exon-scaffold_485-1510915933:380083..380316 | Clytia hemisphaerica | exon |
| TCONS_00068541-exon-scaffold_485-1510915933:379173..379371 | TCONS_00068541-exon-scaffold_485-1510915933:379173..379371 | Clytia hemisphaerica | exon |
| TCONS_00068541-exon-scaffold_485-1491911889:380083..380316 | TCONS_00068541-exon-scaffold_485-1491911889:380083..380316 | Clytia hemisphaerica | exon |
| TCONS_00068541-exon-scaffold_485-1491911889:379173..379371 | TCONS_00068541-exon-scaffold_485-1491911889:379173..379371 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_485 | supercontig | scaffold_485:379173..380316 - |
Blast
The following BLAST results are available for this feature:
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