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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068537 ID=TCONS_00068537|Name=TCONS_00068537|organism=Clytia hemisphaerica|type=transcript|length=314bp
TTAAAGGAAGTAAAAATCCCCACTTTACCAATTAATCGTTTTTTCCTGAG
TTGCTTGTTCTTCGCATAACAACACCCAAAATGTGGTCTTCTTCTGTTTT
CATCTTGGCAACTATCCTTGTTGCAGTAAACAGTCAAAAAGTGTGCAAAG
ATCAATCTCCAACCAGCAATTGTCTCTCATGGAAATCAAATGGTTTCTGC
AAAGAAGACTACTCAAAACTCTACTGTGAAAAGACATGTGGTTTCTGTAA
AGGCTTATCCACACCTGCTCCGCCAACTACCGTTTCAACCCAAGGGCTGC
CCCTCCCGTCTTCA Run BLAST on NCBI transcript from alignment at scaffold_485:321427..322831- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068537 ID=TCONS_00068537|Name=TCONS_00068537|organism=Clytia hemisphaerica|type=transcript|length=1405bp|location=Sequence derived from alignment at scaffold_485:321427..322831- (Clytia hemisphaerica)
TTAAAGGAAGTAAAAATCCCCACTTTACCAATTAATCGTTTTTTCCTGAG
TTGCTTGTTCTTCGCATAACAACACCCAAAATGTGGTCTTCTTCTGTTTT
CATCTTGGCAACTATCCTTGGTAAGTTTTCATTTCGCCTCGTTTGTATTG
TTGACTCTCTCTAGTTCGATCTTAAAGGGACCGAGAATTCTCATCGAATT
AGAGAAAGGTTTAAATTAAAAAATTTGTTTCATAGTATTTTCTATCAAAG
GGACCAACCAATAATGTAGCTCGAATTAACGAAAGATTGGAATAGTAGAG
GTTCGAATAAGAGAGAGAGAGAGCCAACAATATATAATGTATACTGTATT
GTTATCCTTATTAGGTTCTTACCAAATTTCCCACCGCAAAAGTTTTGTGG
TACTATTTCACCTACCACACGTTTTTTTAAAGAACATCCAAAATTTTCGA
AAACTTTTTGCTCTTATTTTCACCATTTTGAAAGTATCGTTGTTCATTTT
CTTAAAAAATAGGTGTTTTAGGGTCCACAAAGACTTGAAATTATCTTAAC
TTGTTCTTAATATTGAGGCCATCGAAGCCTCATGTTCTTATACAGTTTGT
TCTTATGAAGAAAAAAAAAACGTATAGAACTCCGAGCAATTATTTGAAAT
GTAAAAAAGACGGATAGGAGATCTATTACTGCCAGATTGCAAGCAGTTTA
CACTGTCCGTTCAGCGACTACAAAAGTATGGGGCTTGCACGATAAAATTC
TTACAGTTTCGCCTCACAGCTTAATTTCAGTGAAAGCTAATCTGTGGTGT
TCGTGGTGTGAGAGGCATCCGTTCTCACAAGTTAAGTTTCAGTTTCAGAT
CTAATTACAATTATGGTCAGAATATTTGGCAAAAAAATGAATTTAGCTGC
AAAATTTTAAAAACCGCAAGTAAAGGCTCTTTAACTTATAAAGTATAGTT
TTAACTCTGAGTTTCAACATGAGACTTAATAATTAAGAGCTTAGGAGCTG
AGGATCCAAAAGCTTGTGAATGGTCCCGCTAGGACGTGTAGTCTGGAAGC
CATTACACCACTTTAAAATCAAAATATCCGATTAGATAAAGTAGCAAGTC
TGAAAATGCCATGCTTATGTCATGCAAAACGCTAAATACCCAGAAATGCC
AACATGATTGTAGTGTAAACTTTGTTTTATTAAACTTTTTTCTTTTTTTT
CTCACCTATAGTTGCAGTAAACAGTCAAAAAGTGTGCAAAGATCAATCTC
CAACCAGCAATTGTCTCTCATGGAAATCAAATGGTTTCTGCAAAGAAGAC
TACTCAAAACTCTACTGTGAAAAGACATGTGGTTTCTGTAAAGGCTTATC
CACACCTGCTCCGCCAACTACCGTTTCAACCCAAGGGCTGCCCCTCCCGT
CTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068537-exon-scaffold_485-1575043694:322712..322831 | TCONS_00068537-exon-scaffold_485-1575043694:322712..322831 | Clytia hemisphaerica | exon |
| TCONS_00068537-exon-scaffold_485-1575043694:321427..321620 | TCONS_00068537-exon-scaffold_485-1575043694:321427..321620 | Clytia hemisphaerica | exon |
| TCONS_00068537-exon-scaffold_485-1510915933:322712..322831 | TCONS_00068537-exon-scaffold_485-1510915933:322712..322831 | Clytia hemisphaerica | exon |
| TCONS_00068537-exon-scaffold_485-1510915933:321427..321620 | TCONS_00068537-exon-scaffold_485-1510915933:321427..321620 | Clytia hemisphaerica | exon |
| TCONS_00068537-exon-scaffold_485-1491911889:322712..322831 | TCONS_00068537-exon-scaffold_485-1491911889:322712..322831 | Clytia hemisphaerica | exon |
| TCONS_00068537-exon-scaffold_485-1491911889:321427..321620 | TCONS_00068537-exon-scaffold_485-1491911889:321427..321620 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_485 | supercontig | scaffold_485:321427..322831 - |
Blast
The following BLAST results are available for this feature:
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