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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068536 ID=TCONS_00068536|Name=TCONS_00068536|organism=Clytia hemisphaerica|type=transcript|length=836bp
TCTAATCACTTCAAACTGGGTATTAACAGCCAGTCATTGTACTGAAGGCC
AATCACCAGACAGGATTACCGTCAAACCTTAGAGTTCACAACAAAAACTA
TGATGAAACCTCTAAACAACGAATCCAAGTCAAATGAATCATCATGCATC
CAAGATACAGTAGATATAACCTGAATGCAGATATCGCTCTTTTGGAATTG
AAAACACCTGCTCAATTGAACAGTCGCGTACGTCTTGCGTGCGTACCTCA
AGTTGGCGTTTATCCACCAACCGGAAAACAATGCTACCTTGCAGGTTGGG
GAACGACAACCCACCCAGGGATTTCACCAGCCATTCTCCAACAAACGCGA
CTACCAGTTGTTCCAAGCCAAAAATGTCTAAACAGTCAAGAACATGTCTG
TGTTGGAAACGGATTCGATCCACGTCCGGATGGTTCCCAACAACCAAATG
CTTGCCGTGGAGATTCTGGTGGTCCGTTAGTCTGCCAAGGTTCTGATGGT
CGATGGGTGTTGGATGGAGTTGCAAGTTATGTGTACACTTATTGTAAATA
TTACACAGCGTATACACCCTTCAACAAATATTTACCGTGGGTTAGACAAT
ACGTCAGTGGTGTTTAGAAGAACGATATGGAAATCATTAAAAGAACTTAT
AATGTAAAGATACGTGCAAATCGGAATAAAATTTACTTATCAATCCAGTA
TAGATTCTTAGTGGGGAAAACATCCTCCACCTTGCTCGATAGCCATGGTG
GATAAACAATCTCTCGAAAACGTAACCGAACtttaaatctcgtgatccaa
acTCCCAATGTTTACTAAAAAACCTTTGACAAAAAC Run BLAST on NCBI protein sequence of TCONS_00068536-protein >TCONS_00068536-protein ID=TCONS_00068536-protein|Name=TCONS_00068536-protein|organism=Clytia hemisphaerica|type=polypeptide|length=157bp
MHPRYSRYNLNADIALLELKTPAQLNSRVRLACVPQVGVYPPTGKQCYLA
GWGTTTHPGISPAILQQTRLPVVPSQKCLNSQEHVCVGNGFDPRPDGSQQ
PNACRGDSGGPLVCQGSDGRWVLDGVASYVYTYCKYYTAYTPFNKYLPWV
RQYVSGV Run BLAST on NCBI transcript from alignment at scaffold_485:310675..321295- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068536 ID=TCONS_00068536|Name=TCONS_00068536|organism=Clytia hemisphaerica|type=transcript|length=10621bp|location=Sequence derived from alignment at scaffold_485:310675..321295- (Clytia hemisphaerica)
TCTAATCACTTCAAACTGGGTAATTGCTTTACATCCTGGCCTAAAATATA
GATATATCCTACAAAATTACTACGCTGAATGTTCTATCAAAATCCCGATT
GGGATAGAAAATCGGTTGTTCCTAGGCTGAGAAAATAATTGGGATAGATT
AGGAGTGTAATTTTTTCTATTGATTTTCAAACGGGAATGAAACAAGGTCA
TTTTCCCATTGGGACTGAAATTGAAGGGTGTTGTCTCAACGAGGACGAAA
TTTTTGCCACAATTTTCAGGATGGCTAGAGTCTGTGACACAGGATTATTT
TATCAGTTTGAATTCGTGAAGGTTAACAGAAAAATGATATGTGCTTTATA
CACATTGATCGGGTGGGTTTCTTTCTAGATTATGGTATAGTAGGGGGGAT
TTTGTTCGATTTTTTGGAATCGCTTGACTGTTTTGTTAGAAGCACTTGTT
ATACATTTTTGGAAAGCTAAGGGGTAGGGGAATCGAAATTACNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGATTTTCGGACAAATATGACGGTCTCAGGCAAAAATCATAGGG
TTAAAAATTAATGAAAATTTTAGCTTGAGGAAACAGAGACCTGTTGTATA
TTTTTGGAAAGCTCTCAAAAAATTAAGATTAGAGATATATTGCAAGTATA
GGTGATTTCAGTACCTAACTCCAGATATTGAGCTATAAAAGCGCAAAAAC
TGGACAAAATAGCTATGTTTCTGGCTGAAAAACACGGTTTTCAAGGGTTA
ATATCTCGAGTTAGGTACAGAAATCACCTATACTTGCAATATATCTCTAA
TCTTAATTTTTTGAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGCTAAAATTTTCA
TTAATTTTTAACCCTATGATTTTTGCCTGAGACCGTCATATTTGTCCGAA
AATCACACCAAAGTGTCCGAAAAAAAATCGGAAACATAGTAATTTCGATT
CCCCTACCCCTTAGCTTTCCGAAAAGGTATAACAAGTGCTTCTAACAAAA
CAGTCGAGCGATTTTACAAAATGCCCTCTACTAGTACATCATATTTAGAA
TTTTACCTACATTCTCAATATTAACTTTATTTTTTTGTCAAAACTTATGA
TGATCTGACAGATGATGCCTCCGAAAATATTTCATTCTACTAGGCGTTTC
AGAAAAGTTTGAAGTTAATCTTCGAGAAAACTTAAGATTTTTATAAATCC
AAACTTTTCACAATTTGAAGGACTTGAACTTTGCGCTATCATACTTTAAA
TTTGTTTCACGTATTCGAAACTGGTTATAAAGAAAATTCGAAAAAATTAT
CTATCGAATTAAAGTCATTTTTGAGAAAAAGTATAGATAAATTTTATTTA
ATGTCCATTAGGTATTGACGCTAGCTAGTAAATTTTAGTGACATTGAATT
TCTTCACAACTTTGGAGCACATGAAGTAAATTTAAAGTATGATAGCCCAA
AATTTAAGTTAGCTTTTCTTCTTTCTGATGATGAAAAGTTAAGATATATA
ATATTCTAGGATTTCTATTTAACAAGAATCGCAAAATTGCGACTAAATAT
TTCCTTAAAAATGAAGGTCATTATTGACATATATAAAAAAGCACACATAA
TAAAGTATACATATATATTTGTCCAGAAAGAACTGGCATGTTGTTTGCTT
TGTTTTGGTGTTTAAAAATACCTATGTACTTATCAGTCCTAAAAAAAATA
CAAATTTGAATATAATAAGGGCAATAAGTCTGGTTAGATGTTACTTTATT
CACAGGATTTAAGGATTACTGAAAAAATACTACTGCAGATGAACTAAACT
CAAAAACTAAAACTTTACAATAAATTTACATTACGACAAAGTAAAAATCT
ATCTTTAATAGCAACAAAGAAAAAAATGTTGCTCAAAGTTTTAAAGCATT
TAAATAGCTTTAAACAAAAGACCTTTTTTAAAAGAGGCAGCCATATTGAA
TAATTATGTACTCCAGCATAAAAACAATGATACAGCCATGCATAATTTAG
GTCTACTTAGTTCAGTAGGTATAGAGAAATCAAGATTTGAAAACAGACAC
TGCAATGGTTTACAAGACTAGAGAAAGATGTCAACCATCCACACGGTTCA
TGAAAAAAATAAAGTATTTGTCAAAAAAAGGTTCTCTTTTTTTTGGTAAT
CAATGTACACTTTTTAACAGTGTCGGCTGCGCACGCGTATGAACAATTTT
CTATTGTTTTGATTTTGGCAACCACGAGAAACTTCACTCTCCCACGTAAA
AAATCATAGGTAAACAGCCAGTTCTCATAAGAAAACCCAGCAGAGAAATG
GTAGGTAAAGAACTCCTTTTCACCATAACTTCTTTTCCTCTTGGTGAATT
TTTGTGAAATTTTCAGGAGAGATACATAAAATTGTCATTAATATCATGTT
CAAACATCTAAAACATTCTCTTTAAAGGAAGGAAAAAAATGGCAATGTTT
ACATTTCTCTAACCTTCCACAGTACTAAAGTGAGCATTTTTACCTCCCGC
CTCTACGGTGGAGATGGCGAGACTGTTAAACGGTGTCTTCCAACAAACAA
CAATCAATATACCCTAACAGGATCCCACAGTGTAAACATTATCAACCAAC
AAAACCCACACCACCAAAATTGTAAAAATAAGTCAATATAATTTCTATCA
ACAATTCTCGTAAAATGATTTTTTTCAAACATTCTGACTGTCTGATACCA
ATCATGGCTGGAGTCATCATGTGTAGAGTGACTGTGTATAACAACAAAAG
TTTATTGAAAATCATCCCACGGTAATGGTGAAGCTAAAGATTTATCAACC
AAACAAAACTGACGCGCCAAGTCAAATCTGTCGATTAAAAATTTCCTTTA
AAATTACAATCGAAACTTATCTCATAAAATGCTTTTTTCAACATTCTGGA
GAAGTTCAAAGTCAGAGGTATCATATGTAGAGCCAAGCAATACATGAAAA
GTCATTTGCTATCCCATTTGCCATGAGATATACGAGTCAAGAAATCAAAC
AAAAAACAACAAATCATGTCTCTTCACTTCCACTTTCATGTCACATCGTG
TTTTATATGGGGTAACCAGAAAGTCAATCCACAAGAACAGCCATCTTCCT
TTATTATGGAGTGTTCCAAAACTATTGGTAGGTTGTTTGGAAGTAAAGAA
ACCCACACAGTTTGATTTATTTTAAAGATTTAACTTGAAAACAAACTGTT
TCAACCTGCTACATAAGGGAGCGTCTCCAAATATTGTTTCATTTTTAAAC
GAAAATGAAACGAAAGCTTCGTTTATGTGCTTCGTTTATGTTTCGTTTAG
CTTTCGTTTCGACCTCGTTTCGACTTCGTTTCGAATATATTCAGATAATG
ATGTCTGATTAACTTTAATTACTTAAGAAAAGAAGATAATTGAACTGAAA
AAAAGATAATATATTGAAACGAATGGTGAAACGAAATAAATTTTTTCTCT
GGATTTCATGTCATCCAAAACTTTTTAGAATTTTTTAGCAATAGTCTCAT
TTTGTTACTACAACAATAGATAGTTCTTACTTCCTCAAATGTGTAATATT
TTTTTCGATGTTTAAAGGGATTCAGTTTCTGAAGTTTCTTGCTTTCAAGC
TTGACAAGTTTTCTAATATCTTTTACCCTCGATTTAAGAATTCTTTTAAA
CCTGTTTCTGATAAAAAATAAAAATTATGGTATAAGGCTGCGAAGGTACT
TTCCGACATAACAACCCGAAACACTTTGCAAATTACTTCAATATAATTCA
TATGGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATTAC
AACTGAGTTGGTAATTAATTACAAATTGAGTCGGTAACACCTTTAAGACC
TGTTAAAATTGTTGCACTAATTATATCCCTGTTAGCTGATAGCCCCAAAC
AGTAAGAAAAACATATTTCTGAAAAAGTCTACATCATAAAATACGAAAGC
AGACTTCAATCTGGATTGATCTTCAACCAAAACATTCTGTCGAAAATAAA
GTTCAGTCATTAAGATATATTCCTAAAAAAGCGTGCATATGTGAAATTAA
ACATGAACTCCCTCCCTATCCTATCCGTTTCACAAATTTTTAAGTGAGAA
GTTTGTCTAAACGAAATGAAAGGAATAGAAAAAACTCAGAGATAATTTTA
GATAATTATCTCTAAATTAGAACTAATTATGCATTTCGTTTGAGCTTCGT
TTGAACTTCGTTTGAACTTCGTTTTAAATCGTTTCATGAAACAATTTGAA
ACGAAAAAATTGAAACAACATTTGGAGACGCTCCCTAACAATTGCCAGTC
GGGTCTGCTACTAACATGTAATAGTTTTATTATAACCGGGCTTGAGAATC
CGTAAGGAATTTGTAACATATATTATATGTATAGTTTATCAGTAGACTTG
AATCATGATACATTACTGATACTTCACTGGATGCATTTTTCCCTGTGAAA
TTTAAAACGGGCGTCAGTCAGGGCGTACGGAAGGCGTTTTGACACGGGAA
ATTATTATTATTACGGAGGAGAAAGCCTGTTTTAACAAGTACTTCCCTTT
TGGAAAACGGGAAATATTTAATAATTCTTGATTGCGACTTTCAATTAATG
GAGCGTATCGAATAGACACCCCTGTCTCAGTAACCCATTGGGTCTTAAAA
GTTCACCGGGCTGACTTTGAAATGAGAAATATCCACCGGGGTTGAGATTT
CCATTGTTCTTCACTCGATTTTTACATCGGGTTATCGACCGGGGACAATC
TGACCAGTCCACTGATACAGGGGTGTGTATAGTAAAACGTTGTATGGGTG
AATGTAGAGAGTCTATCACCATATTAGTAAAGCTCAAATTGCAGATGTAG
AACGATAAACTCGGTATACACAGTAGAACGTTGAATTAGAGAGCGTCAAC
TGTAATACGAATCAAGGTTGATATTTGATTGATGATTATTTTAGGTATTA
ACAGCCAGTCATTGTACTGAAGGCCAATCACCAGACAGGATTACCGTCAA
ACCTTAGAGTTCACAACAAAAACTATGATGAAACCTCTAAACAACGAATC
CAAGTCAAATGAATCATCATGCATCCAAGATACAGTAGATATAACCTGAA
TGCAGATATCGCTCTTTTGGAATTGAAAACACCTGCTCAATTGAACAGTC
GCGTACGTCTTGCGTGCGTACCTCAAGTTGGCGTTTATCCACCAACCGGA
AAACAATGCTACCTTGCAGGTTAGTAAAACGACGTTGACAGTCTTGAAAG
GGATTAATCATTTAAGATAAGAACCTCCATGTCTCAAAAACTAAACGCAT
GCTTCAAAAGTCTTTCCTGGGACTCCTTTGGCCAGAAGAAAGTCGTTCAG
AATAAGAAATTCCCCTCTCATACATGCGCAATACCTCAAGCTTTTACTCT
ATCAACAAGTGTTTTCCATCGTTCGTTCGGAGAATAGGTTACATTTTTGT
AATTTCTTTGTTGTGCAAGTTCTTTTATGACGGAACAGGAGCGGAAATTT
GAGAAATAAGAAATTTACCATTGAATAATTTTAAAGGTTGGGGAACGACA
ACCCACCCAGGGATTTCACCAGCCATTCTCCAACAAACGCGACTACCAGT
TGTTCCAAGCCAAAAATGTCTAAACAGTCAAGAACATGTCTGTGTTGGAA
ACGGATTCGATCCACGTCCGGATGGTTCCCAACAACCAAATGCTTGCCGT
GGAGATTCTGGTGGTCCGTTAGTCTGCCAAGGTAAGTGATGTTTGATGCA
GGCCTGATATGGTACTGACTTCTTTTTACGGGTGAGTTTTTTTTCGTTTT
TGAGAAATATTGGAGAAATTTTGTCTTGATCCGTTGGGGTTCGGATCAGT
TAGGCTCAAAGTTAGAGTTACACCTTTACTAAGGGCTAATCTGAAATTAA
GAAAATGAAGATATTCCCAAAGAATAGTTTTTCAACTTTGAGGACCTTAT
TTACGGCGAAGAAAAAAAATTTGGAAAAAGCTTTTACTTTAGATAGTGTA
TATAGTGTAGATCTTTTATCGAACTACATTTGACGCTCTCTAATTCGATC
TTTTTTTTTGTCTCAAGAAATTGGAAAAAGTGGCTTTTGACCAATTTCCA
TCCTAATTTTCCGTACAGACAATTCAAAAAAGATTTGCAATAAAAAGGTT
AAATTTTTTGTAAAAAAGGAAGTATAAAGGCCCCATTACACCTAAGAATA
AGGGGGAAGAATATATCTCTGCAGCTGTTACGATTCGTAAATTCTTGTTC
TAGATACACGTAAANCATTTTATTAAAGGAATGGTTCGGTAAAAAATTCA
TTTTTTTATATTATCTGTCCTATCGGATTCTCCTTTTAAAAAGACACACA
TAGATATAAACTTTTAAACTAATTGATTATTCGTTTCCTTTAAAACGCCA
CTCACTTTTGTATGCCTTTTAAACAAGACCTTTTGCTTACGTCACAGAGG
CTGTTAAAAGCTGTAGCTGTGTTTACTGAAGTGAATTAAGGCCCCATTAC
ACCTAAGAATATAAAGGAAGAATAATGTGAAATTTACTGCACACCTGACA
CTTGTGAGCAATTTTATTAAATTCTCCTGTGTAANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTTG
AATATTTTTACGTGTATCTAGAACAAGAATTTACGAATCGTAACAGCTGC
AGAGATATATTCTTCCCCCTTATTCTTAGGTGTAATGGGGCCTTTATAAA
TATTTTTCTGGGAAGAAAAGTGGTTATTTCTGCTAGAAACTGAAGTAAAG
AGGGGTTAATTATGATAAATTTGTACTATAATATTTTTGAATACTTTGGT
AAATGTATTCTGACTCGAAAAGCGATATATTCAAGCTAAGAAGAATATGA
TATCAATGGAAATAAAGCAGATTCTGAGTGAGAGAGAGAGAATGGAGTAA
GCAAGAGAGATATGGACCCCTCATTAACAAGCTGAAGATATTTAATCCCT
GTCTCTATGAGCCTGAACGAGAATTATTGAGTACAAGCGAGAGTGACACT
TCTTCATCCGAAGACAAAGGTGACTATGAAACTTGTTCTAAAGGTAGAAG
TGGGAGTTTAGATTGGTGCGAGTCTGAGTGCTGCCAAATCGAGACAAGAG
AAATTGATTGTTTCAATGAAAAATTTGATCAGGGAGATTTTCAGTGTATT
ATTGATAGGCAACAATTCCCAAAAATGTGCCTTGATGAGGACATTTTGAG
GAGAATGTGCTGACTGGCCTTCACGAGACAAAAGGAGATCATTTGGAAGA
GATACCGTCGAATAGATCCCTAAGATACGCCGCAGCGTACAGGCAGTGTT
CATGGTGGGTTTTCAAAAGATTGAGAAAAAACAATCGCTGAGTTCTCCTA
TCATGACATCATGTGTGCTTTCAAAGACGCGAAGTACGTCGTGCAGTGAC
CCTGAAGGATAAAGGAAGGTGAAAAAAAACTAGGGCGAATCATTTTTTTG
ATTGATGGGTCTGTCAATTCATTCGTTAGTGCAGTGCATTAATAAGTTCA
TTTTCCAGTTTGCATTGGATTACACGTTGTTTTTTTTATTAGAACCCAGT
TTGTAAGAACATTTAGGCTGAAATTTGGCAAAAATTTAAGAACATTATAA
GAACATGTCCAGCCTGAGAATCGAATAGTTTGGCGAAATTCGCTTAAAAA
TCTTTAGATTTCTTAAGGAATTTTGTGCAATTATTACCGTAATTATTCCT
CTCATCTAAAAATAATAGCAAATTTACTCGATTTTTAACCCAATATCGAC
ATTCAAAGGTTTTATTAGATTTTAAGCAAATCGATTTCAAGAACGTCAAT
AAGAACATTTCAGGCTGAAAATTGATGAGAAAATAGGCACATCCAGCCTC
AGCTAAAATTAAGACGTTCTAATAAAAAAAAAACGTGTAACATCCCAAGT
TTCCGTATCATCGATTCCGTTTGGGTTTACTATCTATTGAATTGACACTA
AAAGCTTTGTACTAATTGATGATGTTGGATGGGTCCTTCAGGGACCTGAC
ACGTTTAGCCTTTTATTGTGCCCTCCTTTCATTCGACTTTCTTTTAGTTG
GTTGTTTGTCTTTAATCGAACAAGTTTGGGATAGCGTCTTCCTTCAGTAG
TCTATGCGATGAAAGTCCTAGGATGAGTTTGTGCTAAAAAAAAACAACTT
TTGGTGTTTTTTTTTTCGCTTTGTATTTTGCAACCACCTTCTCTTGAGTG
TTTCGTCCTTAGGTAGCTTGTATAAAGATACTTTCACTCTTTGGCACGTG
AGTTGTTAGTACAGTTCACTGCTCCAAGGCATGGTGACACCCCCTTCTCA
CACGATGGGATTTTTCAACCAGTGGGGATGGAAAAATAACTGACTTAAAC
TCGATGAGGATTGATATTTCCATAGTTTTTATGGCTGGGGATTTTAATTC
TTTTGTTTTCAAGTCAGAAAATTCAGTGGGAATTGGAAAAATACCATAAC
ATTGTGCCGCAGGATTGATATGGTTTATTTGATTATCTCAAAGAATTCTT
TATGATTATCTTCAGTGTGGACAAAAATTGAGAGATGATTTTCCACTGGG
GACGATATTCTGGCCAATTTTACCAGTGGGAAGGGGTCCCAATGGGTCTG
TGAGAAGGGGGTGTATGGTGGGAAGAAAAGTAAATACATACATCAACTTC
ACTTGGAAAACAGTCCAAACTAACTATAAAATTGAGATAAAACTAACTCA
ATCTCGTATGAAAAATGTACACTTTTGCGTTTCTCTTTTTTCTCAATTTT
CTCTGAACAGCCTCCGTGACGTCACATACACAAAATTGCTTTTTAAAAAG
GGGCTTTCTGTAAACAAAAGAATTTAACTCCATTAAATAAAAATCATTCT
TCTAGTCAAATCAAGTATCCCTGATTCATTAAAACCAATAAAATTAAAAA
ATGAGGAGTCAAATTTTTACCGAACCATTCCTTTAACGTCTTTTTAAGGT
TCTTTTTCTTTTTAAGCCCTTAACCATTGATTGTTTGGACGCTTCAGTTA
AATGTTTGCTTTATTTTCCACCAGGTTCTGATGGTCGATGGGTGTTGGAT
GGAGTTGCAAGTTATGTGTACACTTATTGTAAATATTACACAGCGTATAC
ACCCTTCAACAAATATTTACCGTGGGTTAGACAATACGTCAGTGGTGTTT
AGAAGAACGATATGGAAATCATTAAAAGAACTTATAATGTAAAGATACGT
GCAAATCGGAATAAAATTTACTTATCAATCCAGTATAGATTCTTAGTGGG
GAAAACATCCTCCACCTTGCTCGATAGCCATGGTGGATAAACAATCTCTC
GAAAACGTAACCGAACTTTAAATCTCGTGATCCAAACTCCCAATGTTTAC
TAAAAAACCTTTGACAAAAAC Coding sequence (CDS) from alignment at scaffold_485:310675..321295- >TCONS_00068536 ID=TCONS_00068536|Name=TCONS_00068536|organism=Clytia hemisphaerica|type=CDS|length=1422bp|location=Sequence derived from alignment at scaffold_485:310675..321295- (Clytia hemisphaerica)
GTTCTGATGGTCGATGGGTGTTGGATGGAGTTGCAAGTTATGTGTACACT
TATTGTAAATATTACACAGCGTATACACCCTTCAACAAATATTTACCGTG
GGTTAGACAATACGTCAGTGGTGTTTAGGTTGGGGAACGACAACCCACCC
AGGGATTTCACCAGCCATTCTCCAACAAACGCGACTACCAGTTGTTCCAA
GCCAAAAATGTCTAAACAGTCAAGAACATGTCTGTGTTGGAAACGGATTC
GATCCACGTCCGGATGGTTCCCAACAACCAAATGCTTGCCGTGGAGATTC
TGGTGGTCCGTTAGTCTGCCAAGATGCATCCAAGATACAGTAGATATAAC
CTGAATGCAGATATCGCTCTTTTGGAATTGAAAACACCTGCTCAATTGAA
CAGTCGCGTACGTCTTGCGTGCGTACCTCAAGTTGGCGTTTATCCACCAA
CCGGAAAACAATGCTACCTTGCAGGTTCTGATGGTCGATGGGTGTTGGAT
GGAGTTGCAAGTTATGTGTACACTTATTGTAAATATTACACAGCGTATAC
ACCCTTCAACAAATATTTACCGTGGGTTAGACAATACGTCAGTGGTGTTT
AGGTTGGGGAACGACAACCCACCCAGGGATTTCACCAGCCATTCTCCAAC
AAACGCGACTACCAGTTGTTCCAAGCCAAAAATGTCTAAACAGTCAAGAA
CATGTCTGTGTTGGAAACGGATTCGATCCACGTCCGGATGGTTCCCAACA
ACCAAATGCTTGCCGTGGAGATTCTGGTGGTCCGTTAGTCTGCCAAGATG
CATCCAAGATACAGTAGATATAACCTGAATGCAGATATCGCTCTTTTGGA
ATTGAAAACACCTGCTCAATTGAACAGTCGCGTACGTCTTGCGTGCGTAC
CTCAAGTTGGCGTTTATCCACCAACCGGAAAACAATGCTACCTTGCAGGT
TCTGATGGTCGATGGGTGTTGGATGGAGTTGCAAGTTATGTGTACACTTA
TTGTAAATATTACACAGCGTATACACCCTTCAACAAATATTTACCGTGGG
TTAGACAATACGTCAGTGGTGTTTAGGTTGGGGAACGACAACCCACCCAG
GGATTTCACCAGCCATTCTCCAACAAACGCGACTACCAGTTGTTCCAAGC
CAAAAATGTCTAAACAGTCAAGAACATGTCTGTGTTGGAAACGGATTCGA
TCCACGTCCGGATGGTTCCCAACAACCAAATGCTTGCCGTGGAGATTCTG
GTGGTCCGTTAGTCTGCCAAGATGCATCCAAGATACAGTAGATATAACCT
GAATGCAGATATCGCTCTTTTGGAATTGAAAACACCTGCTCAATTGAACA
GTCGCGTACGTCTTGCGTGCGTACCTCAAGTTGGCGTTTATCCACCAACC
GGAAAACAATGCTACCTTGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068536-exon-scaffold_485-1575043694:321277..321295 | TCONS_00068536-exon-scaffold_485-1575043694:321277..321295 | Clytia hemisphaerica | exon |
| TCONS_00068536-exon-scaffold_485-1575043694:315677..315951 | TCONS_00068536-exon-scaffold_485-1575043694:315677..315951 | Clytia hemisphaerica | exon |
| TCONS_00068536-exon-scaffold_485-1575043694:315165..315359 | TCONS_00068536-exon-scaffold_485-1575043694:315165..315359 | Clytia hemisphaerica | exon |
| TCONS_00068536-exon-scaffold_485-1575043694:310675..311021 | TCONS_00068536-exon-scaffold_485-1575043694:310675..311021 | Clytia hemisphaerica | exon |
| TCONS_00068536-exon-scaffold_485-1510915933:321277..321295 | TCONS_00068536-exon-scaffold_485-1510915933:321277..321295 | Clytia hemisphaerica | exon |
| TCONS_00068536-exon-scaffold_485-1510915933:315677..315951 | TCONS_00068536-exon-scaffold_485-1510915933:315677..315951 | Clytia hemisphaerica | exon |
| TCONS_00068536-exon-scaffold_485-1510915933:315165..315359 | TCONS_00068536-exon-scaffold_485-1510915933:315165..315359 | Clytia hemisphaerica | exon |
| TCONS_00068536-exon-scaffold_485-1510915933:310675..311021 | TCONS_00068536-exon-scaffold_485-1510915933:310675..311021 | Clytia hemisphaerica | exon |
| TCONS_00068536-exon-scaffold_485-1491911889:321277..321295 | TCONS_00068536-exon-scaffold_485-1491911889:321277..321295 | Clytia hemisphaerica | exon |
| TCONS_00068536-exon-scaffold_485-1491911889:315677..315951 | TCONS_00068536-exon-scaffold_485-1491911889:315677..315951 | Clytia hemisphaerica | exon |
| TCONS_00068536-exon-scaffold_485-1491911889:315165..315359 | TCONS_00068536-exon-scaffold_485-1491911889:315165..315359 | Clytia hemisphaerica | exon |
| TCONS_00068536-exon-scaffold_485-1491911889:310675..311021 | TCONS_00068536-exon-scaffold_485-1491911889:310675..311021 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_485 | supercontig | scaffold_485:310675..321295 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004252 | serine-type endopeptidase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006508 | proteolysis |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006508 |
proteolysis |
| molecular_function |
GO:0004252 |
serine-type endopeptidase activity |
Blast
BLAST of TCONS_00068536 vs. Swiss-Prot (Human)
Match: CEL2A (Chymotrypsin-like elastase family member 2A OS=Homo sapiens GN=CELA2A PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.775e-23 Identity = 62/177 (35.03%), Postives = 83/177 (46.89%), Query Frame = 3
Query: 39 VLKANHQTGLPSNLRV----HNKNYDETSKQRIQVK*IIMHPRYSRYNLNA--DIALLELKTPAQLNSRVRLACVPQVGVYPPTGKQCYLAGWGTTTHPGISPAILQQTRLPVVPSQKCLNS--------QEHVCVGNGFDPRPDGSQQPNACRGDSGGPLVCQGSDGRWVLDGVAS 527
VL A H RV HN E+ + V I++H ++ ++ DIALL+L P L +++LAC+P G P CY+ GWG G P +LQQ RL VV C +S +C G G ++C GDSGGPL CQ SDGRW + G+ S
Sbjct: 68 VLTAAHCISSSRTYRVGLGRHNLYVAESGSLAVSVSKIVVHKDWNSNQISKGNDIALLKLANPVSLTDKIQLACLPPAGTILPNNYPCYVTGWGRLQTNGAVPDVLQQGRLLVVDYATCSSSAWWGSSVKTSMICAG--------GDGVISSCNGDSGGPLNCQASDGRWQVHGIVS 236
The following BLAST results are available for this feature:
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