TCONS_00068531 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068531
Unique NameTCONS_00068531
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1438

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068531 ID=TCONS_00068531|Name=TCONS_00068531|organism=Clytia hemisphaerica|type=transcript|length=1438bp
CAGATATGGGTTATTAGTAATCATATTTTCTTTGTTGTAGCCAAACCCTG
ATGAATGATACAAGTAGCAAAAAATACCCAGCCGTACCCATGGTAAATAT
ATCCAGGCAATCTGAATCAAATTAATATGACAATCCAAATCAAACACAAT
TGAACCTCAAACTATCTACCATATGGACCTATCAACATTAAAGACGAGTT
AAAACCTGGCCAAATAAAGTTATGGTGTGCTTGTGGTTTGAGTAAGAAAC
AACCTTGGTGCGATGGCTCGCACAAAGGAACTGGGATATCACCTTTGAAA
TGGACTGTTCCAGAAAACAAAGTACAAcgtttatttcaaatttgcaACTa
ttagagaaaaaaacaaaatgaagcttcaTCTAATATTGATGCAATGTATT
ATTATGGTCATTGCCACAGACATCAACATCATTGATTTAACACATGAATT
TGAAAATGGTACATCCCCCTATTGGAAAatggaaaattcttttcatttca
CCTCCAGTTTTTCTGGTCAAACAGCAAATTACTTCTACAGCAGTAACTCT
TTTTGTGCATCAGAACATGGTGGTACCCATTTGGACGCACCAATTCATTT
CGCCAAAGGGAAACATACAGCTGGTGAAATCTCCTTAAAGAATTTGATTG
CCACACCTTTCATTGTGGATGTATCGAGTCATGTGAACAATGATCCAGAT
TTCCAAGTTGATGAGCAACATTTAATGGAAgcagaaaagaaaaatgggaA
GATTCCGGATGGGGCAATACTACTATTATATACTgGTTTGAGTTTGAAAT
ATGACGATTTATCAGCTTATTTTGGAGGCGAACCACAAAATTCTTCAACT
TATCATTTTCCTGGTTTGCACCCAAATGGCGCCCGATGGATTGTTGACAA
TCGAAATGTGAGCGCAGTAGGCATCGACACTCCATCTCTGGATTTCGGAC
AAAGTACACTCTTCCAATCTCATGTCATTCTATTCACTCATAATATACCA
ggattcgaaaatgttgatcTCACTCAGATCGAAAAAATACAATCAATGAA
AAATCCATTAATTATCGCGCTCCcgatgaaaattaaaaatggttCAGGAG
GACCGTTAAGAATTGTTGCCATGGAAACTCCGACAGCTCCTTCGGCTTCC
ATGAGAAACGTCATTTCATTGTTCATGGTTTTAGCATGTTTCAGCTTTGC
TGGGCAGTTTGTCGTTTGAGACTGATATATTGAGAATTGAATTGCAGGCC
TTCTTTAATTGCTGATGAAAATGataaactaacttttttttattatgtCC
GGGATTTTATTTATCAACACGACTTGACTCAATTTCTTTACCGATTTTTg
tagaatttttgtaaataatcaATTTTTAGACTCGTATATTTTATATCTca
caaaatttgttaaaaatttaataCTTGGAGCAAGAAAC
Run BLAST on NCBI

protein sequence of TCONS_00068531-protein

>TCONS_00068531-protein ID=TCONS_00068531-protein|Name=TCONS_00068531-protein|organism=Clytia hemisphaerica|type=polypeptide|length=283bp
MKLHLILMQCIIMVIATDINIIDLTHEFENGTSPYWKMENSFHFTSSFSG
QTANYFYSSNSFCASEHGGTHLDAPIHFAKGKHTAGEISLKNLIATPFIV
DVSSHVNNDPDFQVDEQHLMEAEKKNGKIPDGAILLLYTGLSLKYDDLSA
YFGGEPQNSSTYHFPGLHPNGARWIVDNRNVSAVGIDTPSLDFGQSTLFQ
SHVILFTHNIPGFENVDLTQIEKIQSMKNPLIIALPMKIKNGSGGPLRIV
AMETPTAPSASMRNVISLFMVLACFSFAGQFVV
Run BLAST on NCBI

transcript from alignment at scaffold_485:158308..165009-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068531 ID=TCONS_00068531|Name=TCONS_00068531|organism=Clytia hemisphaerica|type=transcript|length=6702bp|location=Sequence derived from alignment at scaffold_485:158308..165009- (Clytia hemisphaerica)
CAGATATGGGTTATTAGTAATCATATTTTCTTTGTTGTAGCCAAACCCTG
ATGAATGATACAAGTAGCAAAAAATACCCAGCCGTACCCATGGTAAATAT
ATCCAGGCAATCTGAATCAAATTAATATGACAATCCAAATCAAACACAAT
TGAACCTCAAACTATCTACCAGTAAATATTACATCCTTTATAAAATTACT
TTATTATTTTACCCTATACATCAGTCAAAACTATTTCAAATTGCGTTTTA
ACAATTTTTGCAGATCCAAGTTTTTTCCAAATTATGAAGCATCCTCTTTC
AGTTCTTATAAAGTTATAAATTAAATTATTTATTTGCTTCTAATGATGCA
TGGTATGCAGAGGGGTTCTAGGTCCCCCCAGAAAATTTAGCCCCCCCCCC
CTAAAAATTAGGTACCCCCTGACATAAAACCTCTCAGCCCCCAGTAGAAT
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNATATAACGGGACAGATGTTTAAAAA
CTTTCTTGATATAAAAGTTGGACTAAAACAATGAATCTGTGGATTGAAAG
CAGAAAAAGATTACTCCCAATTTTAAACAAAGACAGCTCCCAGATCTTTC
ACATGCAGTTGTAGGTCCCCCCAGCAATATAGGTACCCCCTAAAAAATTA
AATTTTGCCAGCCCCCAGCCAGAATATGGTAAAAAAAAAATTAGGTCCCC
CCTAATCTCTGGGGGGGGGTTCATACCATGTGATGGCATGTCAAAGGAAA
GCTGCTTTGAATAGATATATAAAAGATTTTCACAACCATTTAGGTCATTA
CTGAGATGTTTTCTATCTATCTTAATACATTAATGTATTAATATGATGGA
CCCTAAAATGTAGGTTGAATTTTGTGTTTGAAACTTGATTGTGCCTACTA
TTTTCATTATCAGAAATTCTTAAAAACCAATCTGGTTGATTTGATGATTA
GAATTAATCAAGTAAATTTTGGTCACCTCTTTTCAATGGCCTCTAAAATG
TAGGTTAGAATTCTTTGATAATTTTTCATGAAGTACTTTTGATATAGTCC
ACAGAAGGTATCTAGCCGTTTTTGTCAATTCAGCAATATATATATAAGAA
ATATAATTTATTTCTATTTATACCCAGAAGAGGAAAATATCGATATTGCA
GAATGAGAGGGAAAAGTATTTTTCATCAATTTTCATTTTGTGTCTTTTCG
CCAGTATGGACCTATCAACATTAAAGACGAGTTAAAACCTGGCCAAATAA
AGTTATGGTGTGCTTGTGGTTTGAGTAAGAAACAACCTTGGTGCGATGGT
AAGTTTATACACAACTCAAACGATCATTAATGCTGTTGCGGGTGCAGTCT
ATTGAAACTTCACTAAAGGATGCAGGCCGCAGGCTATGTCCTTGTTTAAA
GTCTAATTCCCTAGTATAATAGACTTAACATGATGTTTCATTGCTACTGC
GTCCGCTGGAGCTGGAACTAGGTGATACAGATCGATCCCTATTCTTTCTT
TTCCTTTTTCTTGGTCTCTTTCCCCTATCATTTTCATCGATATCAGAGCT
TTTTGTAGATTCTTCATTGGTTTTGTTTTATTCTCAGACACCAACTTGGG
TCGAGGAATGAAACAAACAAGTACATAGCCTGAGTCCCACAGCCTCTAGT
GAAGTTTCGCTAGAGTGCGTCCGCAACGGCATTATTGAATTCGTCTGTTT
TTAAGCGAAGTAAAATTATGTAATGATCTATTGGCTTGAACTTGCTTGTA
GGTAAAAGTGTCTTGTTGACGTGTGGGTTTATTATATATTACTTGTCTAA
AATCAAAATCCACAAGGAAGCAAACCCACAACAACATAGACAATCCACAC
ACTTTAGCACAGCTTGAGAAAAATAATACTTATACCCACTGACCTTTATA
TAACCCTGGGAAAAAGCTTCTCAATCCCAGCCAAGCAAAATCTTTGATCG
GAGTTTTTTGAAAATTGGTACCCTAATGTCGGCACTACTCGATAGCGGTG
TAAATGCACCGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTTT
AACATTGCAATGGCTTCTCCTTGGGTACCAATTCTAAAAAAACTCCAATC
AAAGATGGCAGATATTGTTTGGTCCAGGGTTATATAAAGGTCAGTGGTTA
TACCATATGAAGGCAGCAAAACTTTCTTTAATGTTCTACTAAGGCTAATA
AACTAATAATTTTTTTAAGTTTTCAACTTTTGTTTCTTATAAGGCTCGCA
CAAAGGAACTGGGATATCACCTTTGAAATGGACTGTTCCAGAAAACAAAG
TACAACGTTTATTTCAAATTTGCAACTGTAAGTACACAAAAGCTCCACCA
TTTTGTGATGCAACTCATGTTTATTTACCTTTGGCCGTGAAAAAGAAGCA
AGAAGAATGTTCAGCTGATCATTCGAAACAAGTGAAATTATGCACAGGGT
GTGGAAAGGTTCCAGATTGGTAGTTAGTTCTGCCTTAGTTTACTGGCTAC
ACAACATTTAGTTACTGGCTACACAACATTTAAGATCTATTCAGCCTGAT
TACAACAAATCTTTTGCAGATTTTATTGCTGTATTCATCCAGAATCTTGC
ATACAATATGTCCATAAAAAAGCAAAATATGTAATATATATTCAGTGTGT
ACCAAAATAAGAGGAGCGGGCGGGTTTATTATACAAATTCAAATCATTCT
TGCGGCTTTTGATGACTCAATTGTTTAATTTCTTTTTCAAAAACCCACTT
TCATTACCTTGGGAATCTAAGTCTATTGAACATACAAAGAACTTCCTTTT
CAAAATTATATAATGCAGCCCATTAATATAGAATGCTTTGAAATTGATTA
AATTGATTGAATAAGAATTAAAACGAATGGTCTACATTTGTGATGGATCA
AGTAAACTATATGCATTGACTTCATATGAATTACTAGGATTTTCATATAA
AATCTATTAAGCTTTATTGCTTGGGAAATAGTTAATTGAAAAATACATTA
GAGAATGAGATATATTTTCATTGAATTGGGATATTTGTATCCCAATTTTA
CAGTAATGAACTCTAAAGGACCTTTATCTTTGCGATTTAATTTATCTCTC
TGTTTGTTATCTCATGTATAGATTTTTTGGACCTACCTCCGGGTGCCCCG
GTGGAGGTCCTATGAATTAACCCATGTCCGTTCGTTCGTTCGTTTGTTCG
TTTGTTCGTTCGTCCGTCCGTCTGTTACCAGCTTTTCTCAGGATTGGCTC
ATTAAATTTTTTTGATTTTTGGCACAATGATGCAAAATGGTAATGCCCAA
AATGTGACGGAGCCCGATTTTCGAAAAAAAATCATTTCCGGCCGAAAATG
CCGGAAATATGCCGGAAAAACCGGTTTTTTGGCATTTTCTCAAGATTTCA
TCATTAGTTTTTTCTGTTTTTTTGCAAAAAGATGTGTATTATCAATGCCC
AAAATTTGGCCGAGTCCGATTTTTGAGAAAAAATCTTTTCCGGTCGAAAA
TGTCGGAAATATGCCGGAAATCGCCACTTTTGCTGATTTTCATCGGACTT
TTTCCTTATATTTCGTTGTTTTTTTACACAAAAACATTATTAATAGCAAT
GCCCACCATGAAGCATGGTTAAATCGTCAATAGAACTGAGTTTTGAAGCC
GGAACTTTCTAAAAATCGCCGGAGCAGCCCATTTTCGCCGGAAAAAACGG
AATTTCTTGATTTTCTCGAGCTGTACTTTATATTTTTTTATGAAATTTTG
CACGCTGATGCAAAATGATAATACCTAAAATGTATCGAAGCCCGATTTTC
GAAAAACATTTTTTTCCGGACGAAAAAGCCGGAAATATGCCGGAAATACT
GTTTTTTTGGCATTTTCTCGAGATTTTGTCATTAGTTTTTTCTGATTTTT
TGCACAAAGATGCGTATTAACAATGCCCAAAACATGGCCGAGTCCGATTT
TTGAGAAAATTTTTTTCCGGCGGAAAATGCCTGAAATATGCCGGAAATCG
CCGTTTTCTGGGTTTTCATTGGGCCTTTTCCTTTTAAATGGTTGTTTTTT
CATTCAAACACATTATTAATAGCAATGCCCACCATCAAGCATGTTTCAAT
TTTCAATAAAATTGAATCTTGAAGCCAGAACTATTTAAATATCTCCGGAA
CAACCTATTTTCGCTGGAAAGACAGTATTTCTTGAATTTCTCGAGCTGTA
CTTTATATTTTTTTATGAAACTTTTCACACTGATGCAAAATGACAATACC
TAAAATGTGACGGAGCTCGATTTTCGAAAAACATTTTTTTCCGGCCGAAA
ATGCCGGAAATGTGCCGGAAAAACCGGTTTTTTGACATTTCCTCGAATTT
TTATCTTTTATTTTTCTGATTTTTTGCAGAGAGATGCGTATTCACAATGC
TCAAAACATGGCCGAGTTCGATTTTTGAGAAAAATTTCTTCCGGTGGAAA
ATGGCGGAAATCTCCGTTTTTGCAGATTTTCATTGGATTTTTTCCTTATA
TTTCCAATTTTTTTTCACACAAAAACATTATTGATAACAATGCTCACCAT
CAAGCATGATTCAATTGTCAATAAAACTGATTTTTGCGACCAGAACTTTC
TATTTATTTTTTCCTTACATCCCTTTCCTCTCCCTCCATCAACAATCAAT
GATGAATTTTTTGCTTTATGCATTTTCGCCAAACGCTATATTTTCTGACT
GATTTGCTATCTAACTTTCATCATCAGGTAGGTCCATTCAGCATCTAGCT
TGTTTATTTCGACTTTATTAGATTTTACAGTTTGTATAGTAATTTGTTAC
AAAGAGAACATGGAACAAATCTGAATCAATACAGCATTACTTTTTTATAC
TGACCTTTTAGTAATTCTAAAGACTGGTTTCCCAGATTTGAATCATGATT
GCCACTATAAGCAATCCATCAATAATACATATTTTTATTCTAGTAGATTA
GAGAAAAAAACAAAATGAAGCTTCATCTAATATTGATGCAATGTATTATT
ATGGTCATTGCCACAGACATCAACATCATTGATTTAACACATGAATTTGA
AAATGGTACATCCCCCTATTGGAAAATGGAAAATTCTTTTCATTTCACCT
CCAGTTTTTCTGGTCAAACAGCAAATTACTTCTACAGCAGTAACTCTTTT
TGTGCATCAGAACATGGTGGTACCCATTTGGACGCACCAATTCATTTCGC
CAAAGGGAAACATACAGCTGGTGAAATCTCCTTAAAGAATTTGATTGCCA
CACCTTTCATTGTGGATGTATCGAGTCATGTGAACAATGATCCAGATTTC
CAAGTTGATGAGCAACATTTAATGGAAGCAGAAAAGAAAAATGGGAAGAT
TCCGGATGGGGCAATACTACTATTATATACTGGTGAATTTTCAATTTTTG
GGACCTCGGACAGCCTTGGTCTTCTCTTTTCATTAGTTTCAATCGCATAA
ACAGTGATCTGTATTAATTTGCAGAGTCCAAAGACTCTCTCACATTTCAA
CATCTTTGGCTATTCTTTCTATTTCGTGTTTCTTTGGAAGAACAGTTATG
GTTATTTGCTTCTACAATGACAATTTTCCCGTTTCAGGTTTGAGTTTGAA
ATATGACGATTTATCAGCTTATTTTGGAGGCGAACCACAAAATTCTTCAA
CTTATCATTTTCCTGGTTTGCACCCAAATGGCGCCCGATGGATTGTTGAC
AATCGAAATGTAGGGAAATAATTTTTTTATTGCTTTAGGTTAAATTTCAG
GCTGATGGAGGATATTTTTCAATTTTACTCTCTTACTCAGTATTTTGTAG
TCTAAATATAACTTGCAAACCTTTTCAAACTCTTTGTCCTTTTACATCCA
CATGAGCATGATTCGATGGTTTTTTCTGTAATTATTTCGATCAGTAAAGT
TGTTGTTTCTACTTTCACTAGGTGAGCGCAGTAGGCATCGACACTCCATC
TCTGGATTTCGGACAAAGTACACTCTTCCAATCTCATGTCATTCTATTCA
CTCATAATATACCAGGATTCGAAAATGTTGATCTCACTCAGATCGAAAAA
ATACAATCAATGAAAAATCCATTAATTATCGCGCTCCCGATGAAAATTAA
AAATGGTTCAGGAGGACCGTTAAGAATTGTTGCCATGGAAACTCCGACAG
CTCCTTCGGCTTCCATGAGAAACGTCATTTCATTGTTCATGGTTTTAGCA
TGTTTCAGCTTTGCTGGGCAGTTTGTCGTTTGAGACTGATATATTGAGAA
TTGAATTGCAGGCCTTCTTTAATTGCTGATGAAAATGATAAACTAACTTT
TTTTTATTATGTCCGGGATTTTATTTATCAACACGACTTGACTCAATTTC
TTTACCGATTTTTGTAGAATTTTTGTAAATAATCAATTTTTAGACTCGTA
TATTTTATATCTCACAAAATTTGTTAAAAATTTAATACTTGGAGCAAGAA
AC

Coding sequence (CDS) from alignment at scaffold_485:158308..165009-

>TCONS_00068531 ID=TCONS_00068531|Name=TCONS_00068531|organism=Clytia hemisphaerica|type=CDS|length=2556bp|location=Sequence derived from alignment at scaffold_485:158308..165009- (Clytia hemisphaerica)
GTGAGCGCAGTAGGCATCGACACTCCATCTCTGGATTTCGGACAAAGTAC
ACTCTTCCAATCTCATGTCATTCTATTCACTCATAATATACCAGGATTCG
AAAATGTTGATCTCACTCAGATCGAAAAAATACAATCAATGAAAAATCCA
TTAATTATCGCGCTCCCGATGAAAATTAAAAATGGTTCAGGAGGACCGTT
AAGAATTGTTGCCATGGAAACTCCGACAGCTCCTTCGGCTTCCATGAGAA
ACGTCATTTCATTGTTCATGGTTTTAGCATGTTTCAGCTTTGCTGGGCAG
TTTGTCGTTTGAGTTTGAGTTTGAAATATGACGATTTATCAGCTTATTTT
GGAGGCGAACCACAAAATTCTTCAACTTATCATTTTCCTGGTTTGCACCC
AAATGGCGCCCGATGGATTGTTGACAATCGAAATATGAAGCTTCATCTAA
TATTGATGCAATGTATTATTATGGTCATTGCCACAGACATCAACATCATT
GATTTAACACATGAATTTGAAAATGGTACATCCCCCTATTGGAAAATGGA
AAATTCTTTTCATTTCACCTCCAGTTTTTCTGGTCAAACAGCAAATTACT
TCTACAGCAGTAACTCTTTTTGTGCATCAGAACATGGTGGTACCCATTTG
GACGCACCAATTCATTTCGCCAAAGGGAAACATACAGCTGGTGAAATCTC
CTTAAAGAATTTGATTGCCACACCTTTCATTGTGGATGTATCGAGTCATG
TGAACAATGATCCAGATTTCCAAGTTGATGAGCAACATTTAATGGAAGCA
GAAAAGAAAAATGGGAAGATTCCGGATGGGGCAATACTACTATTATATAC
TGGTGAGCGCAGTAGGCATCGACACTCCATCTCTGGATTTCGGACAAAGT
ACACTCTTCCAATCTCATGTCATTCTATTCACTCATAATATACCAGGATT
CGAAAATGTTGATCTCACTCAGATCGAAAAAATACAATCAATGAAAAATC
CATTAATTATCGCGCTCCCGATGAAAATTAAAAATGGTTCAGGAGGACCG
TTAAGAATTGTTGCCATGGAAACTCCGACAGCTCCTTCGGCTTCCATGAG
AAACGTCATTTCATTGTTCATGGTTTTAGCATGTTTCAGCTTTGCTGGGC
AGTTTGTCGTTTGAGTTTGAGTTTGAAATATGACGATTTATCAGCTTATT
TTGGAGGCGAACCACAAAATTCTTCAACTTATCATTTTCCTGGTTTGCAC
CCAAATGGCGCCCGATGGATTGTTGACAATCGAAATATGAAGCTTCATCT
AATATTGATGCAATGTATTATTATGGTCATTGCCACAGACATCAACATCA
TTGATTTAACACATGAATTTGAAAATGGTACATCCCCCTATTGGAAAATG
GAAAATTCTTTTCATTTCACCTCCAGTTTTTCTGGTCAAACAGCAAATTA
CTTCTACAGCAGTAACTCTTTTTGTGCATCAGAACATGGTGGTACCCATT
TGGACGCACCAATTCATTTCGCCAAAGGGAAACATACAGCTGGTGAAATC
TCCTTAAAGAATTTGATTGCCACACCTTTCATTGTGGATGTATCGAGTCA
TGTGAACAATGATCCAGATTTCCAAGTTGATGAGCAACATTTAATGGAAG
CAGAAAAGAAAAATGGGAAGATTCCGGATGGGGCAATACTACTATTATAT
ACTGGTGAGCGCAGTAGGCATCGACACTCCATCTCTGGATTTCGGACAAA
GTACACTCTTCCAATCTCATGTCATTCTATTCACTCATAATATACCAGGA
TTCGAAAATGTTGATCTCACTCAGATCGAAAAAATACAATCAATGAAAAA
TCCATTAATTATCGCGCTCCCGATGAAAATTAAAAATGGTTCAGGAGGAC
CGTTAAGAATTGTTGCCATGGAAACTCCGACAGCTCCTTCGGCTTCCATG
AGAAACGTCATTTCATTGTTCATGGTTTTAGCATGTTTCAGCTTTGCTGG
GCAGTTTGTCGTTTGAGTTTGAGTTTGAAATATGACGATTTATCAGCTTA
TTTTGGAGGCGAACCACAAAATTCTTCAACTTATCATTTTCCTGGTTTGC
ACCCAAATGGCGCCCGATGGATTGTTGACAATCGAAATATGAAGCTTCAT
CTAATATTGATGCAATGTATTATTATGGTCATTGCCACAGACATCAACAT
CATTGATTTAACACATGAATTTGAAAATGGTACATCCCCCTATTGGAAAA
TGGAAAATTCTTTTCATTTCACCTCCAGTTTTTCTGGTCAAACAGCAAAT
TACTTCTACAGCAGTAACTCTTTTTGTGCATCAGAACATGGTGGTACCCA
TTTGGACGCACCAATTCATTTCGCCAAAGGGAAACATACAGCTGGTGAAA
TCTCCTTAAAGAATTTGATTGCCACACCTTTCATTGTGGATGTATCGAGT
CATGTGAACAATGATCCAGATTTCCAAGTTGATGAGCAACATTTAATGGA
AGCAGAAAAGAAAAATGGGAAGATTCCGGATGGGGCAATACTACTATTAT
ATACTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042739XLOC_042739Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068531-proteinTCONS_00068531-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068531-exon-scaffold_485-1575043694:164839..165009TCONS_00068531-exon-scaffold_485-1575043694:164839..165009Clytia hemisphaericaexon
TCONS_00068531-exon-scaffold_485-1575043694:163612..163705TCONS_00068531-exon-scaffold_485-1575043694:163612..163705Clytia hemisphaericaexon
TCONS_00068531-exon-scaffold_485-1575043694:162433..162516TCONS_00068531-exon-scaffold_485-1575043694:162433..162516Clytia hemisphaericaexon
TCONS_00068531-exon-scaffold_485-1575043694:159378..159813TCONS_00068531-exon-scaffold_485-1575043694:159378..159813Clytia hemisphaericaexon
TCONS_00068531-exon-scaffold_485-1575043694:159051..159172TCONS_00068531-exon-scaffold_485-1575043694:159051..159172Clytia hemisphaericaexon
TCONS_00068531-exon-scaffold_485-1575043694:158308..158838TCONS_00068531-exon-scaffold_485-1575043694:158308..158838Clytia hemisphaericaexon
TCONS_00068531-exon-scaffold_485-1510915933:164839..165009TCONS_00068531-exon-scaffold_485-1510915933:164839..165009Clytia hemisphaericaexon
TCONS_00068531-exon-scaffold_485-1510915933:163612..163705TCONS_00068531-exon-scaffold_485-1510915933:163612..163705Clytia hemisphaericaexon
TCONS_00068531-exon-scaffold_485-1510915933:162433..162516TCONS_00068531-exon-scaffold_485-1510915933:162433..162516Clytia hemisphaericaexon
TCONS_00068531-exon-scaffold_485-1510915933:159378..159813TCONS_00068531-exon-scaffold_485-1510915933:159378..159813Clytia hemisphaericaexon
TCONS_00068531-exon-scaffold_485-1510915933:159051..159172TCONS_00068531-exon-scaffold_485-1510915933:159051..159172Clytia hemisphaericaexon
TCONS_00068531-exon-scaffold_485-1510915933:158308..158838TCONS_00068531-exon-scaffold_485-1510915933:158308..158838Clytia hemisphaericaexon
TCONS_00068531-exon-scaffold_485-1491911889:164839..165009TCONS_00068531-exon-scaffold_485-1491911889:164839..165009Clytia hemisphaericaexon
TCONS_00068531-exon-scaffold_485-1491911889:163612..163705TCONS_00068531-exon-scaffold_485-1491911889:163612..163705Clytia hemisphaericaexon
TCONS_00068531-exon-scaffold_485-1491911889:162433..162516TCONS_00068531-exon-scaffold_485-1491911889:162433..162516Clytia hemisphaericaexon
TCONS_00068531-exon-scaffold_485-1491911889:159378..159813TCONS_00068531-exon-scaffold_485-1491911889:159378..159813Clytia hemisphaericaexon
TCONS_00068531-exon-scaffold_485-1491911889:159051..159172TCONS_00068531-exon-scaffold_485-1491911889:159051..159172Clytia hemisphaericaexon
TCONS_00068531-exon-scaffold_485-1491911889:158308..158838TCONS_00068531-exon-scaffold_485-1491911889:158308..158838Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_485supercontigscaffold_485:158308..165009 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
368.341	363.282	552.393	540.341	42.1284	31.6287	19.7743	21.8074	16.4504	20.3704	10.2432	10.9073	10.4229	10.1409	13.4055	10.2625	17.0385	11.2094	5.30341	12.2566	11.2926	11.1431	211.687	174.081	7.90142	9.75854	16.2645	16.3389	96.685	116.94
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR007325KFase
Vocabulary: Biological Process
TermDefinition
GO:0019441tryptophan catabolic process to kynurenine
Vocabulary: Molecular Function
TermDefinition
GO:0004061arylformamidase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019441 tryptophan catabolic process to kynurenine
molecular_function GO:0004061 arylformamidase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068531 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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