TCONS_00068493 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068493
Unique NameTCONS_00068493
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4763

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068493 ID=TCONS_00068493|Name=TCONS_00068493|organism=Clytia hemisphaerica|type=transcript|length=4763bp
GGTTTTATCAAGATGAAGGTCGAGCAGCATGTGTATGACCGTCTCCTTGA
ATGTCATGGCAGATTCAAATACCGATTCTCCACCCTCCTCTTCCTCCTCA
CTTGTTCAAAAGAGAATCAATTCTTTGAATAACAACAACAAACCAAACCA
TGCTTCATCCGCCACCCGCCCTTCCAGTGTTATGGCGTCCAGGACTCGAA
CGACTGGTATACCGGAAAAACGGGCGACCAAGAAGCCGGTACCGTTACCC
AAGTCCGGTTTGAAAGCTCCGGTTCCTGTTCGCGTAGCAGGAACTTCATC
AACTGCTCACAAGGTGGCTACGAGTAAAGTTAGCTCCACGCAAATACGCG
CTACAACACGAAAAACTACCACCGCAACGGGAGGGCGAACTTCGGTCACT
TCTTCCAAACGCAGTGGAGTCAAACCTGCTCCACCTATCGCTATTCGAAC
TTCAACCACATCTACAGCTACCAAAGCTAAAAGGGAAAGTCATATCCCTC
AAGCCTCAAAACGCCTATCAAACTCTTCAGCTAATAGCACAAGAactaaa
accaaagaaaaagaaaatgtccCTGTGGAGGATTCGAAAGAGTGTAAATG
TGAAAACAATCAGAATTGTGGATGTAAAAAAGAACGTAAGACTGGAGGAA
CGAGTCTAAAGAAGACTAAATCAACTCGAACTCCTCAAAGACATGCAACT
TACGTTTCTGAACTCAATAAAGATATTcgtaagaaatttcaaaagcaaaa
atcagAAAGGGAAAAGCAAGATAAAGTTGCGAAAGAAAAACCGAAAGTCA
AATCTAAACCTGCTAAGAAACCGGATAATCTACACGATAGGAACTTACAA
AATAAACTTGCGAGTCCTGGGCGAATCGTTCACTGCCCGCTTCATTCAAA
GTTTGGGAATCAGTTGTCGAGTAAATTTATCAAAGCACGTTGTATACCGG
AATGTCCACATTATGAATCAAAACCAAGCCGTAGTAATTCCCAAGCAAGT
ACTGTTTCTAATGCTTCAAGATCTCCTATATCTTCACCGGCCGTTCAGAA
ACGCACCATGGCAACTCGACCTGGTGTACGAACTGCAAATAAAGCACAAA
AAACTGTTCCTTATGTCATAACTTCAAGTAAAAAGACAATCAGTAATCGT
AATGGAACGAGTAGTAATGTTCGCGTACGATCTGCACCACAAAAATCGAC
AACGGCACCTAAAAAACCCGTTCAATCCTATCTCGTTCGCAATGGAATGA
TACCTGATCCACAGAAATCCACCCTCCCTCCGCCCATCGCTCCACGCCCA
AAAAAAGTACGAcagaaaagttttaaattgaGTCGAACGAAATCGAAATC
GTTCAAATACACGAACAAACCGACCGTTTCCAAACGAATACAAAAGATCA
ATCAAGACCTGCAACAACAAAAGACACGTGCGACGGAGAGCGATGATAAT
TACTCTACTACAGACTTTGAAACAGAAACGGAGGGTTTGTCCACAGACTT
TCTCTCCACCTCAGATGGTGGCCATTCTTCGGCCGatgaaaaagtttaca
aaaaatCCACTCCAACAAAAACTATGAAAAAGGCTGCACGACAAAAAAGC
TTACGTTTGAATCGTACCAAGAGTCGGTCTAAATCGTTTCGCGCAAAAGC
TTCGAATGTGACTAAGCGTCCTTTATCGAAGAAACAATCCGAGACTTCAT
TATTAAGCGAAGATAGTTTACAGTTTGATGACGATAGTCTAGGGGCTGGA
CAAAGTGTAAACGAATTAGATTTGAACTTAGAAGATTTTGATGAGAACGG
TGCCTTATTGTTCGATCAGTTTGACGAAAATGCCGGCACCGACGAGGAAG
GAGAAGATTTAGAGTTCGAAACTGACGAAGAGTTGGTGTCTTATTATTTC
GAACTTTTCAAGAAAGAATTTCCTGAAATCGTCCAATCTGCTAACCTAAC
TAAAGAAGAAATGGTCACTTTCTTCAATCCACTGGTGAACCGAAGGCCGC
GCTTACAACGTCAAAAACAATTGTTCCCGAAAGCCAAAGGAAAACACTTC
CTTCGCGCTGGTGATATGAACACGAATATCGCAACATGGGCGCGATTACT
GAAAAGGGCGGCACCGCCCTCCTCGCAGTCATTCAGTCCGAACGCTGGTG
GTGGTAGCATGTCTAATTCCGACATTAGTTTAAATTCGAACGAACCGACG
TTGGTGAGCTCCACTTCGAACATCCACTCCCGCTCCTCATCACCAGGCCA
CCACTCCGCCTCATCATCAAACCACTCCTCCATCCAAGATATCTCAAACG
CAAAAAATCTCTCTAACCAAGATTTAACGAGACCGACCGATCGACCCACG
AGTCGTGAGCTTCCATCCCTTGACGCTATTCAACGTCACGAAACTCCGCC
CGCCGCCCCGATCTCTCCGCCCTCCACTTCACCGCCGCCTCCTGTGGAAT
CGAACATTTCGCCTCCTCCAAGACAAGCGGCCACGCCCACTACGCAGACg
atagcaaaagaacaaaaggCGTCCATTAAATCACCTTCACCGCCATTAGA
TTCCCAACGCCCTTCGTCCAAATCTGATCCGCCCAAACCCACCCCTGCTG
TTCCTGCACATGGAAAATCATCGCCCAAACCAGAACTGAAATCCATCGGC
AGAAATTCCGGTAGAAAGTCAGCTGGCAGGTCCCCACCACCAAGGAGATC
ACGAAGTCTTACGATGTCTGTGGACCAATTCCGACATATCAGTGTTCTTG
GGCGTGGTCATTTCGGAAAGGTGCTGTTAGCGGAATACAAGACAACGAAA
GAACTGTTTGCAATCAAAGCCTTGAAGAAGGGTGATATTATCTTCAGAGA
CGAAGTTGAAAGTTTGATGTCGGAGAAGAGGATCTTCGAAGCAGCCAACT
GCGTTCGTCATCCATTCTTAGTCAATTTGTTCGCATGTTTCCAAACAAAG
GACCATGTTTGTTTTGTGATGGAGTATGCACCGGGAGGAGATTTGATGAT
GCATATTCATGAAGAAGTGTTCAGTGAGCCAAGAACTATGTTTTATTCTG
GTTGTGTTATCCTTGGTCTACAGTACTTGCACGATCATGAAATTGTTTAC
AGAGACTTGAAATTAGATAATTTATTACTGGATGCAGAAGGTTATGTGAA
AATAGCAGATTTTGGTTTATGTAAAGAAGGGATGGGTTTTGGACAGAAGA
CTGGAACTTTTTGTGGAACACCTGAATTCTTGGCTCCTGAGGTTTTGACG
GAGACTTCGTACACACGTTCAGTGGATTGGTGGGGCCTGGGTGTGCTCAT
CTTCGAAATGTTGGTCGGTGAGAGTCCCTTCCCCGGAGATGATGAGGAAG
AAGTGTTTGACAGTATCGTCAACGATGAAGTGCGTTATCCGAGGTTTCTC
TCCAATGACTCCATCGCACTCATGAGGAGGcTGCTTCGAAAGAATCCGGA
CAGGAGGCTGGGAAGCAGTCAGCGAGATGCGGAAGATATCAAAAAGCAAC
CTTTCTACAAAGACATGAAATGGGATAGTTTACTGCACCGCAAGTTAAAA
GCGCCCTTCGTCCCAACCGTCAAGCATGCTGAAGATGTCAGTAACTTTGA
CGTGGAATTCACTTCTGAGGAACCGGTACTCACGCCTCCTCGTGAACGGA
AAACGCTGTCCACCGCCGATCAGCATATGTTTTCTGGGTTTGATTACGTG
GCGAACTGGTGTTGAACACATTGAAGAACCACGTGGGAGAGTTGCGTATT
CGCCTTTACGAAGGAGGATTTACCTTCAGAACGTCCGAAAGACGTCCATA
AATCGCCCGCCGGAGGATTTCCACAGATGGAGCTAGCCCCTAGATACGCT
GTTGACCAGTGTACTGGCTAGAGAGACGAGAAACATCCGTTACGGCAGAT
CAATCGACACATTTTATGCTGTGTAAGAGATGCAAAGCATTCGTACTACC
AGCATTGGAGATCTCAAAGACGGTCATGTTGTGAAACTTTTGACCGCCAT
CCAATATAACGTacctttttggtaattttaatgGAAAGCAAAGCTTTTTG
AAGAGCTTCCTGAGTTTGATGGACTTTTTGGTAcaccttttcaaacattt
ttttggatAAGAAAAGTtccttttttgagaattttaagtATTTATTATTT
CTTATGGTGAAACATACAAATGGAATTCCATGTTATTGTTATTCACGCAA
ATAaaccttttttgtaaatttgcgatttttttgtaatattgacttttttg
ctttttgcagTTGAAGTCTTTTATATTGCTACAAAAGCAAATTGGatgca
aaatatattttcaaagggTAGCTTTCTATAAAAAGAGGGTTTTGAAAGTT
CGTTCATTCTGTTCAGTTTTGTGTCAATTAGACAATCGCCAAACTTACAC
GAAATGAAATGAAGTTTTTATGATGAGTCCCATAATTTATCACTGATTCA
GGAACATTTATAGTCTAATAAGATTAGACTGGTTTTATATCGCTTTCGAA
ACAAGTTAGGTatgaattaaatttttcactGCTGTTACGTTTGtcataaa
aaatgtaaaaaaatatagTCTGTCTAGTGCGGAGAAATATCTTTGGAAAT
ATGATTTGTATATTACTACCTAGTCATTTTAAacttgtcttcttttttca
attttttttctaaaaaaattaaatattaaattgttaataaaatattctaa
aataatttttatggaaTACGACTCAATTTTTTTGGTGTTTCCAATTAAAG
GTCATTAAAAGGC
Run BLAST on NCBI

transcript from alignment at scaffold_485:258045..267979+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068493 ID=TCONS_00068493|Name=TCONS_00068493|organism=Clytia hemisphaerica|type=transcript|length=9935bp|location=Sequence derived from alignment at scaffold_485:258045..267979+ (Clytia hemisphaerica)
GGTTTTATCAAGATGAAGGTCGAGCAGCATGTGTATGACCGTCTCCTTGA
ATGTCATGGCAGATTCAAATACCGATTCTCCACCCTCCTCTTCCTCCTCA
CTTGTTCAAAAGAGAATCAATTCTTTGAATAACAACAACAAACCAAACCA
TGCTTCATCCGCCACCCGCCCTTCCAGTGTTATGGCGTCCAGGACTCGAA
CGACTGGTATACCGGAAAAACGGGCGACCAAGAAGCCGGTACCGTTACCC
AAGTCCGGTTTGAAAGCTCCGGTTCCTGTTCGCGTAGCAGGAACTTCATC
AACTGCTCACAAGGTGGCTACGAGTAAAGTTAGCTCCACGCAAATACGCG
CTACAACACGAAAAACTACCACCGCAACGGGAGGGCGAACTTCGGTCACT
TCTTCCAAACGCAGTGGAGTCAAACCTGCTCCACCTATCGCTATTCGAAC
TTCAACCACATCTACAGCTACCAAAGCTAAAAGGGAAAGTCATATCCCTC
AAGCCTCAAAACGCCTATCAAACTCTTCAGCTAATAGCACAAGAactaaa
accaaagaaaaagaaaatgtccCTGTGGAGGATTCGAAAGAGTGTAAATG
TGAAAACAATCAGAATTGTGGATGTAAAAAAGAACGTAAGACTGGAGGAA
CGAGTCTAAAGAAGACTAAATCAACTCGAACTCCTCAAAGACATGCAACT
TACGTTTCTGAACTCAATAAAGATATTcgtaagaaatttcaaaagcaaaa
atcagAAAGGGAAAAGCAAGATAAAGTTGCGAAAGAAAAACCGAAAGTCA
AATCTAAACCTGCTAAGAAACCGGATAATCTACACGATAGGAACTTACAA
AATAAACTTGCGAGTCCTGGGCGAATCGTTCACTGCCCGCTTCATTCAAA
GTTTGGGAATCAGTTGTCGAGTAAATTTATCAAAGCACGTTGTATACCGG
AATGTCCACATTATGAATCAAAACCAAGCCGTAGTAATTCCCAAGCAAGT
ACTGTTTCTAATGCTTCAAGATCTCCTATATCTTCACCGGCCGTTCAGAA
ACGCACCATGGCAACTCGACCTGGTGTACGAACTGCAAATAAAGCACAAA
AAACTGTTCCTTATGTCATAACTTCAAGTAAAAAGACAATCAGTAATCGT
AATGGAACGAGTAGTAATGTTCGCGTACGATCTGCACCACAAAAATCGAC
AACGGCACCTAAAAAACCCGTTCAATCCTATCTCGTTCGCAATGGAATGA
TACCTGATCCACAGAAATCCACCCTCCCTCCGCCCATCGCTCCACGCCCA
AAAAAAGTACGAcagaaaagttttaaattgaGTCGAACGAAATCGAAATC
GTTCAAATACACGAACAAACCGACCGTTTCCAAACGAATACAAAAGATCA
ATCAAGACCTGCAACAACAAAAGACACGTGCGACGGAGAGCGATGATAAT
TACTCTACTACAGACTTTGAAACAGAAACGGAGGGTTTGTCCACAGACTT
TCTCTCCACCTCAGATGGTGGCCATTCTTCGGCCGatgaaaaagtttaca
aaaaatCCACTCCAACAAAAACTATGAAAAAGGCTGCACGACAAAAAAGC
TTACGTTTGAATCGTACCAAGAGTCGGTCTAAATCGTTTCGCGCAAAAGC
TTCGAATGTGACTAAGCGTCCTTTATCGAAGAAACAATCCGAGACTTCAT
TATTAAGCGAAGATAGTTTACAGTTTGATGACGATAGTCTAGGGGCTGGA
CAAAGTGTAAACGAATTAGATTTGAACTTAGAAGATTTTGATGAGAACGG
TGCCTTATTGTTCGATCAGTTTGACGAAAATGCCGGCACCGACGAGGAAG
GAGAAGATTTAGAGTTCGAAACTGACGAAGAGTTGGTGTCTTATTATTTC
GAACTTTTCAAGAAAGAATTTCCTGAAATCGTCCAATCTGCTAACCTAAC
TAAAGAAGAAATGGTCAGTTTTCTTAAAGTTCAACGCGATTTTTCTTGCT
GCGCTGGTTGTCTTGTTTCCGTGAAAACTTTCTTAGATTTCCGTGAAAAC
TTTCTTAGATTTTCATTTCACGTTTCATGTTTGATTAACACTTCGAAGCA
CATCAACAGTTCTACAAACTCACAGTTAGTCTTTTAAGCTAAATCATGCC
ATGGCATAATAATTGTTCAAAGTCTCATTCACATTTTCTTTTTCGACAGG
TCACTTTCTTCAATCCACTGGTGAACCGAAGGCCGCGCTTACAACGTCAA
AAACAATTGTTCCCGAAAGCCAAAGGTAAGTCCAATcttcaataaatttc
aattAATCTTGCATAACATTTCGAAAGTCCCATATATTCCTTGATATATT
GATTTGGCAAGTTCGACTTAGCACCATTTTTCGATTAATGAGATCTTTCT
TACCTCTCTCAGTACACTAAACTGATCACACCTGCGCTGGAGTGGTCAAT
ATTTCCTTTTATAGCACTAATCAACAAATCTCCACTCTTCCTCTCAGTGT
TTTTTCTCACGCTCTTTTCCCTTATTTGGATTGTCAGGAAACCTCTAAAT
ACTCTGTGTACCATTTCCTTGTTGTTTAGCAAGACGTAgtaatttagaaa
aaaagtagaTGTTCATTTCAAATGTCAGAAGCTTTGTCAACTTCTCCTTA
AGTGTGGTGTTCTTGCTGCCTCTATTTCTTTGtacttttttttctaattt
tctggAAAAATGGTGTTGAGTGAAGTTTTTAATGAGATCTATGTACTTGT
CTTCTATGTTGCTGTTTGCTGCTTTTTTGGAACCGGTATGGTAAGAtctt
acaaaataaattctcattCAATTCAAGTTAATGCTTTTCTCACTCAGTGT
TTATCATTTCTCACTTTCTCTTTTTCCAGGAAAACACTTCCTTCGCGCTG
GTGATATGAACACGAATATCGCAACATGGGCGCGATTACTGAAAAGGGCG
GCACCGCCCTCCTCGCAGTCATTCAGTCCGAACGCTGGTGGTGGTAGCAT
GTCTAATTCCGACATTAGTTTAAAGTGAGTATCTCCCTTTATGATTCATG
TGCTACATGTTGTTAATATTATAGGACTTTTCATAATTCGAAGATatgat
ttcattacaaaaaagtttgaatttaaaAGGATTGTGGTAGCTTTTAAGCt
tcgttttttcaagttttctttgGAAGAATTTAATGACGTGGAAAAAAGGG
TTCTTTTTCTATTTCGCTCTTCAAAGACGGAAAGAAAGACAAAAGTTTAG
AAGAAATCGTCGTCAATTTTACATAGAGTATTATTAACTTTTGAAAGTAC
AGTTATTCTTCGAAACTTGTTTTTATAACagtcaaaaatgaaatatttgc
cAAATCCCACGAGTGTTCTTCTAACACATGTcacaaatgatttttctttc
ttccAGTTCGAACGAACCGACGTTGGTGAGCTCCACTTCGAACATCCACT
CCCGCTCCTCATCACCAGGCCACCACTCCGCCTCATCATCAAACCACTCC
TCCATCCAAGATATCTCAAACGCAAAAAATCTCTCTAACCAAGATTTAAC
GAGACCGACCGATCGACCCACGAGTCGTGAGCTTCCATCCCTTGACGCTA
TTCAACGTCACGAAACTCCGCCCGCCGCCCCGATCTCTCCGCCCTCCACT
TCACCGCCGCCTCCTGTGGAATCGAACATTTCGCCTCCTCCAAGACAAGC
GGCCACGCCCACTGTAAGTTGTGATTGCTTGTTATTTAGTCCTACTTCTA
ATGCCAAATCATAATGATTCTATGTCGGGTGTTAATAATGAAGTCGGGTC
TTAATGCAACATATCAAAGTATCACTTGATGAAAATGAATTAATCTCATC
TAACCGTGCACAGAAAATTTCACAATTAAATAACAACGTATTCACTGGAT
TTGATGGTATTAATGTTCGTGCCTTTAAATTTTGATCATCAATTCACTCT
TACAagttacaatcatggtcgaattATTGATCTTTTAGTGtatttaacgt
ttttcagaatttaaagttcgggcgagaattgctattttagtacttctact
ttctttcattgaacatttcgattttagaggggttcggtggcttctaggct
atattccaaacCTTCTTAGAGCAAATTTGAGCTATTAATTCCtgaaatcc
taaggtcctaagttttaTTAagtcatgttaaaactcagagttaaaacttt
ccaactgtagtttaacgcgtCATTTgtggtttttttaattttgaaggaaa
atcccctttgtctcaaatattgtGTCCGTGATTGTAGCTCATATTTTCAA
TCTTTCTCTGTCTTCTGCTGTAGTTGCTAAATGTGACTCCTCTTTTGTTA
TGGGATCCAGGACACTTCTTCCGGGCTCCGTCGTTTTCTACAttggaaat
taatttttttctattatttctGATTCTCTAGAAAGAGACTCAAAAAAATC
TCCCTGATTTAATGTCCAGTGGTTCCATCTAAACAATCTTATGGGCAACA
TATATCTAAAAGCCTAGCAAGACTATAATCAGAACAAGAGACGCTCGCTT
TAAATGTACCGTCCAGCTCTCGATAATTTGAAAAACTTGagtgaaattaa
aaacattacaTGAGATTCTTCAGACAATGACGGCTAAAACACGCAGTcct
agcttttttatttttatgttttagtTAAGATTTGCTcttttctaaataaa
aagattgtttgttttgaatttgaaaaaaattcgaatgtcattaattaAAT
AAGGTCGTAAATTACATTCAAAAAGAgatgtaaaaaagaaaagagaaaag
agtGGGCAAATTAAGACAGAAATTTAATTGTTTAATGTAGACGGGtcttt
aatttcaaaacttcaaGGCTGACGAAGTCTTAATCAGGCCCTATCAATAA
AACATTGcatgcgaaaacgaaagtaacacGCGAACAGACAAATAAAATGA
CATACATACTACTGCTACTAATATATAGATCTTAAATGATGTTCACAGTG
ATGCAAGATATTGTTTCTGGTAACCTATGTAACCAATTTAATCCACGACA
CGAACAAGAAACACTTTTCACGGCTCAAAATGGTACCGCTGTTACCTGGT
TAAAGTAATTTCGCAAAACGAACGTTCATCAATTCCACTACATCCATCTA
GAATAATCTCCCTAACGATATGAAAAATACTGGAAACAAAGTCAATTCCT
ACTTTCAAATCTTCTTTGAAGCGATATATTTGCATTTAGAAATTCATCCT
GTTGCTAGTTCCCGTTCCTGTTTAATTGTTTTCCTTTTACAGTGACCCCT
AGAGGACACAATGGCTGAGCTGTCTAAAAAGCGTTGTTTGCCAGTCATTT
TAAATATGATCTAAGTTCCAGGCAGAAACTAGTTTTTACTAGGCTGTCcg
aaattcaaataaaaataaaaatagaaaaatagaaatgatCGATGAGTTTC
TTATTGTTAAACAGCCATCATGAACGTTGAAAAACCGTTTATCTACAATT
GAATATGCTGTGTAATCAATTAAGTCATTATGGAAAATTtgcaagaattt
tttttggttttctttcAGACGCAGACgatagcaaaagaacaaaaggCGTC
CATTAAATCACCTTCACCGCCATTAGATTCCCAACGCCCTTCGTCCAAAT
CTGATCCGCCCAAACCCACCCCTGCTGTTCCTGCACATGGAAAATCATCG
CCCAAACCAGAACTGAAATCCATCGGCAGAAATTCCGGTAGAAAGTCAGC
TGGCAGGTCCCCACCACCAAGGTGAGCAGCAATCATAATTTGTAAAGTGT
TAGCAAAAGatttgaatacaaaatttttgttgtttcacACCCTTCATAGC
TTCATATTTTATCGCCAAAGTTTCCAGTATAGACATATAACTTACACATT
TAACCAAGAGCTGCTTGTAATTCATTTCCTAAAATGATTATTTTGCAGGA
GATCACGAAGTCTTACGATGTCTGTGGACCAATTCCGACATATCAGTGTT
CTTGGGCGTGGTCATTTCGGAAAGGTGAGAGATAAAACAATCTTTGTATT
TGACCATAAAAGTTCAATTTGTCAGAAGAAAGCAGTCTTTGTTCGGATAA
AATCTGACAGTGCTCCttctttttttctgggtggGCAATAACGCTTAAAC
TGCACTTAAGAAAACCACTAGACTCCAGCATCCTGTTATGCGTGCCCTGA
TGACTGTTTAAATTGCTCTAAATCGGAAATGCATTTTCCTTTCCTTAATT
AGGTGCTGTTAGCGGAATACAAGACAACGAAAGAACTGTTTGCAATCAAA
GCCTTGAAGAAGGGTGATATTATCTTCAGAGACGAAGTTGAAAGGTAATT
CTCATACTCATGTCGATCGcctccccccccttttttttaaacttcttgAA
AAATTCCTAAGAAGAAGTTGTTGTGATTCCTCCACATTTTAACTTTCGGA
AATTCTAACTTTCAGTTTGATGTCGGAGAAGAGGATCTTCGAAGCAGCCA
ACTGCGTTCGTCATCCATTCTTAGTCAATTTGTTCGCATGTTTCCAAACA
AAGGTTTGTAGCCATTTCTACATTTCCCTTAAGTTTTATCAGAACTCTAC
GGACGTACCTAATCAATTATACTTGCTTATTAAATTGTTATCAAGACATG
CTCATGTGAGCGGGTAACTCGGAAGGTTTTTACCTTTTCCTCATAGAGTG
CTCGATAGTTTAATAAAACAATGTTACAATGTGACTAAATTCTAActtca
aactcagagtttcacGGCACCTCCGCACCATTCTTCAgtgaaaaaagtta
tacattagtATACAAACTTGCTTTGATCTTGTTATTTTAGGACCATGTTT
GTTTTGTGATGGAGTATGCACCGGGAGGAGATTTGATGATGCATATTCAT
GAAGAAGTGTTCAGTGAGCCAAGAACTATGTTTTATTCTGGTTGTGTTAT
CCTTGGTCTACAGTACTTGCACGATCATGAAATTGTTTACAGAGACTTGA
AATTAGATAATTTATTACTGGATGCAGAAGGTTATGTGAAAATAGCAGAT
TTTGGTTTATGTAAAGAAGGGATGGGTTTTGGACAGAAGACTGGAACTTT
TTGTGGAACACCTGAATTCTTGGCTCCTGAGGTACGTCGTAACTTTTATT
ACTTGAATGCTTTCACACTCCAATGAAACTTGCCAGTTGGTGACTCTTCT
GAACGCTGTTTTGGCGTGGCTGTTACTCAAATTTCTCTAAAGGCATCTTC
AACATCTGAAAACTTTATGATTTATTTAGGTTTTGACGGAGACTTCGTAC
ACACGTTCAGTGGATTGGTGGGGCCTGGGTGTGCTCATCTTCGAAATGTT
GGTCGGTGAGGTAAGTGATTATCTGAGCTCGAAACTTTGCAATGTTTAGT
ACAAAAGATTTGCGTTACTGAAGATTTCATTTGCAAGAAAACCTAATTGA
AAATCCTAATCGAATTGTGTCGATTAGAGTACTaaaaatttttctcttct
tCTCTTGAACAGAGTCCCTTCCCCGGAGATGATGAGGAAGAAGTGTTTGA
CAGTATCGTCAACGATGAAGTGCGTTATCCGAGGTTTCTCTCCAATGACT
CCATCGCACTCATGAGGAGGGTAAGTTATCTAGAATGATATAGTACAATC
ATTAATTTCGAAGGCTTACGCATATCGAATAAGAATTGATTAAATGGTCG
TTTTTTGTATGGAGCGAATAGGTTATTCTGCATTAAACcttttcaaaaga
agaaaacatgATTGTACTTAAACCCCGCTAAATGACTTCATTCTATCTAT
TTACTGCAAGCAAGGTGTATTGGCTTCTTTTTTGTTAAGAAAACACGAAA
AATTACGAACTCTAAGCAAGTTCAAGCTCAGCTCTATACTCTACTGCTGG
ATGTTAATATATtctactttttcactttttcagcTGCTTCGAAAGAATCC
GGACAGGAGGCTGGGAAGCAGTCAGCGAGATGCGGAAGATATCAAAAAGC
AACCTTTCTACAAAGACATGAAATGGGATAGTTTACTGCACCGCAAGTTA
AAAGCGCCCTTCGTCCCAACCGTCAAGCATGCTGAAGATGTCAGTAACTT
TGACGTGGAATTCACTTCTGAGGAACCGGTACTCACGCCTCCTCGTGAAC
GGAAAACGCTGTCCACCGCCGATCAGGTAAAGATTGTGAATGCTTTTCAC
GAGATCTATTCGTTAAAAGATGGCTTGTATTTTTTATTATACATTCGTGA
GGCTGCCTGTAGAGTTTTAAGGAGCGCTCAtgctttaagggctctgacca
tagtgaattttgaaatttattttctgactgatctaCGCAGAAAAACCATG
CCATATTGTATATTTTCTGTCAGGCCTTTAACCATTCCTGAAtctaaaaa
ggtaaaaatcgCGAAGacaagtatttcaactttgaggaccttattttcag
cgaagaaaaaacattttgaaaattttttgcacTAGATGGTTTATCTTttg
ctgaacaaaaaaaaaaattttcggaaaatttttgtgaaaactttttcgtc
tcaaaatcttgaaaatagtggtttttgaccaatttttcaactttttcgta
caaaaagacagtttttgtaaaaagtgccAAGGAACTTGCTTTATCTTCAA
ATCTCATAACCGATCTTTTGACTATGTTCGTTCAGAGCCCTTAATCAAGC
ACCTTCTTGctatcaaatcaaaatttattgcatTTCACTCTGTATCTACA
CCACTCACTAAGTTTACAAATCATGAATGTCTAGAAACTATGAAAACCTC
ACGATGCCACTTGATTGAATGATTATTCTGATGGTTAATTTTCAGCATAT
GTTTTCTGGGTTTGATTACGTGGCGAACTGGTGTTGAACACATTGAAGAA
CCACGTGGGAGAGTTGCGTATTCGCCTTTACGAAGGAGGATTTACCTTCA
GAACGTCCGAAAGACGTCCATAAATCGCCCGCCGGAGGATTTCCACAGAT
GGAGCTAGCCCCTAGATACGCTGTTGACCAGTGTACTGGCTAGAGAGACG
AGAAACATCCGTTACGGCAGATCAATCGACACATTTTATGCTGTGTAAGA
GATGCAAAGCATTCGTACTACCAGCATTGGAGATCTCAAAGACGGTCATG
TTGTGAAACTTTTGACCGCCATCCAATATAACGTacctttttggtaattt
taatgGAAAGCAAAGCTTTTTGAAGAGCTTCCTGAGTTTGATGGACTTTT
TGGTAcaccttttcaaacatttttttggatAAGAAAAGTtccttttttga
gaattttaagtATTTATTATTTCTTATGGTGAAACATACAAATGGAATTC
CATGTTATTGTTATTCACGCAAATAaaccttttttgtaaatttgcgattt
ttttgtaatattgacttttttgctttttgcagTTGAAGTCTTTTATATTG
CTACAAAAGCAAATTGGatgcaaaatatattttcaaagggTAGCTTTCTA
TAAAAAGAGGGTTTTGAAAGTTCGTTCATTCTGTTCAGTTTTGTGTCAAT
TAGACAATCGCCAAACTTACACGAAATGAAATGAAGTTTTTATGATGAGT
CCCATAATTTATCACTGATTCAGGAACATTTATAGTCTAATAAGATTAGA
CTGGTTTTATATCGCTTTCGAAACAAGTTAGGTatgaattaaatttttca
ctGCTGTTACGTTTGtcataaaaaatgtaaaaaaatatagTCTGTCTAGT
GCGGAGAAATATCTTTGGAAATATGATTTGTATATTACTACCTAGTCATT
TTAAacttgtcttcttttttcaattttttttctaaaaaaattaaatatta
aattgttaataaaatattctaaaataatttttatggaaTACGACTCAATT
TTTTTGGTGTTTCCAATTAAAGGTCATTAAAAGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042721XLOC_042721Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068493-exon-scaffold_485-1491911889:258045..260007TCONS_00068493-exon-scaffold_485-1491911889:258045..260007Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1510915933:258045..260007TCONS_00068493-exon-scaffold_485-1510915933:258045..260007Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1575043694:258045..260007TCONS_00068493-exon-scaffold_485-1575043694:258045..260007Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1491911889:260244..260319TCONS_00068493-exon-scaffold_485-1491911889:260244..260319Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1510915933:260244..260319TCONS_00068493-exon-scaffold_485-1510915933:260244..260319Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1575043694:260244..260319TCONS_00068493-exon-scaffold_485-1575043694:260244..260319Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1491911889:260924..261068TCONS_00068493-exon-scaffold_485-1491911889:260924..261068Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1510915933:260924..261068TCONS_00068493-exon-scaffold_485-1510915933:260924..261068Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1575043694:260924..261068TCONS_00068493-exon-scaffold_485-1575043694:260924..261068Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1491911889:261451..261757TCONS_00068493-exon-scaffold_485-1491911889:261451..261757Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1510915933:261451..261757TCONS_00068493-exon-scaffold_485-1510915933:261451..261757Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1575043694:261451..261757TCONS_00068493-exon-scaffold_485-1575043694:261451..261757Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1491911889:263613..263815TCONS_00068493-exon-scaffold_485-1491911889:263613..263815Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1510915933:263613..263815TCONS_00068493-exon-scaffold_485-1510915933:263613..263815Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1575043694:263613..263815TCONS_00068493-exon-scaffold_485-1575043694:263613..263815Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1491911889:263993..264068TCONS_00068493-exon-scaffold_485-1491911889:263993..264068Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1510915933:263993..264068TCONS_00068493-exon-scaffold_485-1510915933:263993..264068Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1575043694:263993..264068TCONS_00068493-exon-scaffold_485-1575043694:263993..264068Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1491911889:264297..264388TCONS_00068493-exon-scaffold_485-1491911889:264297..264388Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1510915933:264297..264388TCONS_00068493-exon-scaffold_485-1510915933:264297..264388Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1575043694:264297..264388TCONS_00068493-exon-scaffold_485-1575043694:264297..264388Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1491911889:264510..264597TCONS_00068493-exon-scaffold_485-1491911889:264510..264597Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1510915933:264510..264597TCONS_00068493-exon-scaffold_485-1510915933:264510..264597Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1575043694:264510..264597TCONS_00068493-exon-scaffold_485-1575043694:264510..264597Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1491911889:264885..265175TCONS_00068493-exon-scaffold_485-1491911889:264885..265175Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1510915933:264885..265175TCONS_00068493-exon-scaffold_485-1510915933:264885..265175Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1575043694:264885..265175TCONS_00068493-exon-scaffold_485-1575043694:264885..265175Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1491911889:265324..265404TCONS_00068493-exon-scaffold_485-1491911889:265324..265404Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1510915933:265324..265404TCONS_00068493-exon-scaffold_485-1510915933:265324..265404Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1575043694:265324..265404TCONS_00068493-exon-scaffold_485-1575043694:265324..265404Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1491911889:265557..265664TCONS_00068493-exon-scaffold_485-1491911889:265557..265664Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1510915933:265557..265664TCONS_00068493-exon-scaffold_485-1510915933:265557..265664Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1575043694:265557..265664TCONS_00068493-exon-scaffold_485-1575043694:265557..265664Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1491911889:265978..266220TCONS_00068493-exon-scaffold_485-1491911889:265978..266220Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1510915933:265978..266220TCONS_00068493-exon-scaffold_485-1510915933:265978..266220Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1575043694:265978..266220TCONS_00068493-exon-scaffold_485-1575043694:265978..266220Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1491911889:266890..267979TCONS_00068493-exon-scaffold_485-1491911889:266890..267979Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1510915933:266890..267979TCONS_00068493-exon-scaffold_485-1510915933:266890..267979Clytia hemisphaericaexon
TCONS_00068493-exon-scaffold_485-1575043694:266890..267979TCONS_00068493-exon-scaffold_485-1575043694:266890..267979Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_485supercontigscaffold_485:258045..267979 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.622589	0.470432	2.71903	2.54162	2.24919	2.03929	2.96441	3.4056	1.47991	1.1799	2.8435	2.70076	13.2362	13.4854	8.69753	10.9062	5.74476	6.54932	9.35537	9.67738	7.96107	8.15455	2.91987	4.94402	5.63899	6.48641	1.81957	0.478311	0.816811	1.44546
Blast
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BLAST of TCONS_00068493 vs. Swiss-Prot (Human)
Match: PKN2 (Serine/threonine-protein kinase N2 OS=Homo sapiens GN=PKN2 PE=1 SV=1)

HSP 1 Score: 547.74 bits (1410), Expect = 6.307e-172
Identity = 253/332 (76.20%), Postives = 296/332 (89.16%), Query Frame = 2 
Query: 2717 SVDQFRHISVLGRGHFGKVLLAEYKTTKELFAIKALKKGDIIFRDEVESLMSEKRIFEAANCVRHPFLVNLFACFQTKDHVCFVMEYAPGGDLMMHIHEEVFSEPRTMFYSGCVILGLQYLHDHEIVYRDLKLDNLLLDAEGYVKIADFGLCKEGMGFGQKTGTFCGTPEFLAPEVLTETSYTRSVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSNDSIALMRRLLRKNPDRRLGSSQRDAEDIKKQPFYKDMKWDSLLHRKLKAPFVPTVKHAEDVSNFDVEFTSEEPVLTPPRERKTLSTADQHMFSGFDYVANWC 3712
            ++  FR  +VLGRGHFGKVLLAEYK T E+FAIKALKKGDI+ RDEV+SLM EKRIFE  N VRHPFLVNLFACFQTK+HVCFVMEYA GGDLMMHIH +VFSEPR +FY+ CV+LGLQYLH+H+IVYRDLKLDNLLLD EG+VKIADFGLCKEGMG+G +T TFCGTPEFLAPEVLTETSYTR+VDWWGLGVLI+EMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS ++I++MRRLLR+NP+RRLG+S++DAED+KK PF++ + W +L+ +K+K PF+PT++  EDVSNFD EFTSE P+LTPPRE + LS  +Q MF  FDY+A+WC
Sbjct:  653 NLQDFRCCAVLGRGHFGKVLLAEYKNTNEMFAIKALKKGDIVARDEVDSLMCEKRIFETVNSVRHPFLVNLFACFQTKEHVCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHEHKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGYGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSTEAISIMRRLLRRNPERRLGASEKDAEDVKKHPFFRLIDWSALMDKKVKPPFIPTIRGREDVSNFDDEFTSEAPILTPPREPRILSEEEQEMFRDFDYIADWC 984
The following BLAST results are available for this feature:
BLAST of TCONS_00068493 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PKN26.307e-17276.20Serine/threonine-protein kinase N2 OS=Homo sapiens... [more]
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