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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068466 ID=TCONS_00068466|Name=TCONS_00068466|organism=Clytia hemisphaerica|type=transcript|length=779bp
gcaaaaacaaaagattaagaaaataaaaagaaataaatgaagAGAATGAG
ATGAGTACACCATTGTACATCCTCCAAAGCGAGTATTGGGTTCGCATCAA
CCTCGCTTCGGAGTATTGTATCAAAGAAGCGCTCATTGATGTACTTCACA
ACGTGCACAAAGACCCTTTTTATACTGGACTTCCAACTTGTCCAAAACAA
CTTTATCAAATATTCGTGCAATGCAAACAAGACAATAAACACGAGTTGAA
CAAAGTGTTGAAGAAAGAACAATGGCAAATATTGTGTCCACAAAATGGAT
CATCCAACCCAGAGGATTGGGATATCACCTTACTGATTGCTGTATTGAGG
TCAGTGGCAGTGGTTGGATTGCAACCTGCTGGAGGATGGAAAATCAAATC
TCTTCAATCCAACGATCAATCTATTGGAGCTTTCTTGTTTTTGATCAGAA
ATTTAAGAAATGACTTAATACATGGTTCAGTCAATGCAGTACCAAATTTA
CAAGCTTTCAAACAACTGAGATCTCGAATGGAGAACATTTTACTGGGATT
GAAATACAAGAATATGCAAATGTTTTATGATTTGGAAAGTTGTCCATTGG
ATAAACATGTGTTGGTTATTTCTCGAATGGTCACCAATTTGGATCAAGAA
GTGGATTTGTTGCGAAATGAAGCGAGCGATAATTCGAATGCTATCAAAAA
TATCGAACAACATAATCAATGGATCAAAACTTATTTGAAACAATTATCTT
CGGCAAAAGCTGAGAAAACTGACGTCGAA Run BLAST on NCBI transcript from alignment at scaffold_485:94374..97357+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068466 ID=TCONS_00068466|Name=TCONS_00068466|organism=Clytia hemisphaerica|type=transcript|length=2984bp|location=Sequence derived from alignment at scaffold_485:94374..97357+ (Clytia hemisphaerica)
gcaaaaacaaaagattaagaaaataaaaagaaataaatgaagAGAATGAG
ATGAGTACACCATTGTACATCCTCCAAAGCGAGTATTGGGTTCGCATCAA
CCTCGCTTCGGAGTATTGTATCAAAGAAGCGCTCATTGATGTACTTCACA
ACGTGCACAAAGACCCTTTTTATACTGGACTTCCAACTTGTCCAAAACAA
CTTTATCAAATATTCGTGCAATGCAAACAAGACAATAAACACGAGTTGAA
CAAAGTGTTGAAGAAAGAACAATGGCAAATATTGTGTCCACAAAATGGAT
CATCCAACCCAGAGGATTGGGATATCACCTTACTGATTGCTGTATTGAGG
TCAGTGGCAGTGGTTGGATTGCAACCTGCTGGAGGATGGAAAATCAAATC
TCTTCAATCCAACGATCAATCTATTGGAGCTTTCTTGTTTTTGATCAGAA
ATTTAAGAAATGACTTAATACATGGTTCAGTCAATGCAGTACCAAATTTA
CAAGCTTTCAAACAACTGAGATCTCGAATGGAGAACATTTTACTGGGATT
GAAATACAAGAATATGCAAATGTTTTATGATTTGGAAAGTTGTCCATTGG
ATAAACATGTGTTGGTTATTTCTCGAATGGTCACCAATTTGGATCAAGAA
GTGGATTTGTTGCGAAATGAAGCGAGCGATAATTCGAATGCTATCAAAAA
TATCGAACAACATAATCAATGGATGAAAACTTATTTGAAACAATTATCTT
CGGCAAAAGCTGACAAAACTGACGTCGAAGGTGAGATACattggttttca
attttttcgaaaGCACATTTACTTTCTTACTTCTTTTGAAGTCTTTGTGT
TGTAAGAGCTGAATCTTGTTAAACTTATTACCAGTTGCCCCCAATTTTTG
TGGTCATTGAGTAACAccatcatagtgtcctcccccctggattcaggggg
gggatgggttttgaggtcaaaaggacgtataggggggaaagaattttttt
tgaagccagggtgGGAAAAAACGAGGGggggggatggaaaattttcattc
taggcatgggggggggatactcaccaaaatcaattcaaaattgaaaaaca
tctggttttatgagatgatatagcataatgcttagttttattaatattat
ggtttgaaaacaaccatcctttccatttcttcttgaattagaactacctt
agggaaaacaataagcgttaagttcatcaaattatagcctggagatccat
gttatgatttcttattctatatactgatggcaaaatatatagcatggtac
gggctgacagtttgaatttcccatatcctaataacggttgaaaacacagc
caatcaaattctgttatcgtttcactggtcacactttcttaaagaaagtg
caagttccgaaatttaatttttattttagtaagtgaatacagcgctaaat
tcgaatttcccactgtaatttttttgaggccaaaatcggactcacagctc
tgacccgtcaagtattcatcagattaaaaaaaaatacgcaNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNCAACATAATCAATGGATCAAAACTTATTTGAAACAATT
ATCTTCGGCAAAAGCTGAGAAAACTGACGTCGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068466-exon-scaffold_485-1491911889:94374..95084 | TCONS_00068466-exon-scaffold_485-1491911889:94374..95084 | Clytia hemisphaerica | exon |
| TCONS_00068466-exon-scaffold_485-1510915933:94374..95084 | TCONS_00068466-exon-scaffold_485-1510915933:94374..95084 | Clytia hemisphaerica | exon |
| TCONS_00068466-exon-scaffold_485-1575043694:94374..95084 | TCONS_00068466-exon-scaffold_485-1575043694:94374..95084 | Clytia hemisphaerica | exon |
| TCONS_00068466-exon-scaffold_485-1491911889:97290..97357 | TCONS_00068466-exon-scaffold_485-1491911889:97290..97357 | Clytia hemisphaerica | exon |
| TCONS_00068466-exon-scaffold_485-1510915933:97290..97357 | TCONS_00068466-exon-scaffold_485-1510915933:97290..97357 | Clytia hemisphaerica | exon |
| TCONS_00068466-exon-scaffold_485-1575043694:97290..97357 | TCONS_00068466-exon-scaffold_485-1575043694:97290..97357 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_485 | supercontig | scaffold_485:94374..97357 + |
Blast
The following BLAST results are available for this feature:
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