TCONS_00068440 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068440
Unique NameTCONS_00068440
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2544

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068440 ID=TCONS_00068440|Name=TCONS_00068440|organism=Clytia hemisphaerica|type=transcript|length=2544bp
AGCCAAGTCAATGAATACGAAAGCTGATAGAGATGAAATTCatgaatTGT
CCACAGTGATGAATTCGAAATTGACGTTGAAGGCTGACAAATATGAAATT
GATGAATTGAGCAACAAAGTTGACCAGCTATCAATGGAATCAAAATCTCT
AAAGGACACAACAAAGACACATTGGAATTTGCCAGACCTTTGATTGAATC
CATTCACTTGAAACTTCAACAAAATCAAGCAATTGCTTTGAGTGAAATGG
GAGGTGTGGGAAAAACACAAATTGCTGCAAAGTTCGTTCAAATACACAAA
GATGAATATCGGAAGATATTTTGGATTTCTGCTCTCAGCCTCAAGAGATC
TCTGAACGAGATTTTGTGTGCAATTGGTTGTAAACAACTAATAGCTGATG
AACCTTCGATGGAAAATCTCACTTTCGTTTTCCTCTCTAAGATTTGTGAA
GGCTCCAAAAGATCGCTGGTTGTATTGGATGACGTCACTGAGGTCACAAA
AGACGTCACTTCATTCATTGgaaatatgaaagaaaaaatcagcTTATTGT
TGACATCTCAATTGAGGGATTGGGAAGATTATGGTTTGATTCAAATTGCT
GTTCCATGTTTCCATGAACAAGAATCCATTGGCTTCTTACAGAATGAACT
TACTACAGCAAGCCATCAAGAAATCTCCATTTTAGCGAATCGTTTACAAT
CATTACCTTTAGCCCTTCACCAAGCCATTTGttacataaaaaaaaataaa
gttcctcTACACAAATACATCAAACAATTTGAAGCAtgcagaaaaagtgt
tttgggAATGAAAATCAATTCCTTTACTGAATATGACAAAACATTGTTGA
CAGTTTGGGATTTAGCTTTTGCGAAGATTCGGGTCGAATCAAAGAATGCT
CTTTTGATCTTGGGAATGATGGCTTTCATGGacaatcgaaaaataaaaaa
aaagacattcttttattttgataaagttGACAAATTTGAATTAAATGAAA
TCATCTCACTGCTTGGTCAATATTCATTGGTCAACGAGCGAAACGAATGT
TTAGAAATTCACAGTCTTGTGCAAAAAGTTATCCGATATCGTATTGATCA
GAAACACTTTGTTGAGGATGAATGTCCGTTGACACTGCTAGAAGGTGTGC
TTTTGAAAATCGAGGTTTCTATTAAAGATTTGTTTGCAAATGATGACTAC
GAGGATTTATGGTACATTCATGTTTTTCGTTTGATCATGAGTGGTGCACT
CAAAACTATCAACTTTGATGTTACCCTGGTGTTAAATATCGCCGTAGGCA
GAATGGAAATGGAAAACTTATACCAAATTTCTGAActtctttcaaaagat
ttgtTAAAACAATATCGGTTGTTTCGAGATGTGGAAACTTTTCAGACATT
GTTGCTTGTTCATCGTCGTTTCATAAACGCGTCAATTAATTTAGGTTTAC
TTAATTTGAATGACATTTTTGCTTTTGAAGAAGAGTTTTCCTCAGAGCTT
GAAGAAAGTTCTGTAGAAGTTTACCGTTGGAAGCTACTGCAAGCTGTGGC
ATATAATATACGTGGAAGAATGTCGTTATGCAAAGATATCGTTCGAAATT
TATTCAATGAACTAGTCAAGAAGAAAGGATTTGATGATGTTAAATTAAGA
TTGGCGAGTTTTCTCCCTGTAAGGGTTATTGAAGTATTGTTGAATTCTGT
TGACACAAATAATCTCAGTGACGCTGACTTTTTGGTGTATTATGATGGAA
AATGTTCTTTATACATCCAGAACGGTTGCTATCTTTTGGCTGAACAAACC
ATGAAGAATTGGAAAGAACATTtacacagaaaaaaaatttctcgatCGTC
TCAGATTAACTTCACAAAAAAGAATTGCTTTTTTCTTTACAAGAAAGGAA
ATTACAACGAAGCACTACTTGCATGCGCTGAACTTAAACGAGACATTGTT
TTTACTGATGCAGATGTTCTCATTTGGGAAGCCttgattttgatcaaatt
aGGAAAGTTCAACGACGCAGAAGTGTTACTTGATGGCTTTGACCAACACA
ATAATATTATCATTGACATCAGTTCATACCTGAAATTTCGAAAGAACGAC
TTTGAGGTCGTAGTAAAGCTCCTCACAAATGTGGAAGATGAGGATTTgtt
aaatcttttgtttttggtAAAGGAATATGCAAAACTGCATCGACAACTAG
AAAATAATAAATCGAGAGAATTGGTTGAACGATGtttgcaaatgaaaaaa
attgtaaatgaaTTATTTCAAGTACAATTGGATTCGATATGTGTTTGAAA
TCTTATTATATGGAATTATGATTAGAATTGCATCTTTGGGTATTACTCCA
ACTTTTGGCTAAACTGATTAGTTTTTCAAATGCCAGCAATGTAATTGTTG
CATTGACTAGGCctgtaaaatcaaaatttctttttaattatgaAAATATT
CTATGGGATGGTTTCAGTGGGGACCTGATTCCACCATTCGGTCAAATTTG
TGTCCAATTTCCGTCACACCGTCAAGATCAAGACCGAAATTCTG
Run BLAST on NCBI

transcript from alignment at scaffold_485:8194..23043+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068440 ID=TCONS_00068440|Name=TCONS_00068440|organism=Clytia hemisphaerica|type=transcript|length=14850bp|location=Sequence derived from alignment at scaffold_485:8194..23043+ (Clytia hemisphaerica)
AGCCAAGTCAATGAATACGAAAGCTGATAGAGATGAAATTCatggtattt
tttgtttgtttaattctttttcaaaatagaataaaccagccgaggctgga
aggtcagccaatagagcttagctagatagctttaataagtgggNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNaaagaatccccttgatgaaaatcatttgtttgatttgccgagtta
aaaaaataaatgacagaaattgaagcttgcaacagatttacactggaaat
actttggtacttaacactgacttatcacatctgacttatcacatctgact
agTTCTGACTATCACTTGatgcttgagccgccatcttgaaactacattat
gatctgtaaaaacaacgcacgctaaaagtacccaaaaagttaacccgatc
ggaagaaagtttagaaatcaaagtgaNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Naagtgagatcggaaaatcggatttttttttgccgtcttatggaagaaga
agaaccgaattttacctatttgaatgctcagcttaggctgaccaataaaa
aGTGAATCAAAGGTCAACACCGGCAACTACCCCAGGAAGCGCTGCCTTCG
TTTATTATGTACGAGAAGTTATGAGGCTTCATCACTCTGCACCCTTTTGA
AGTGAAAGTGAtctttataaaaactttgacGCCGCTCAAAAAAGCTGACA
CGTTGActttccattattttttatctagaatTGTCCACAGTGATGAATTC
GAAATTGACGTTGAAGGCTGACAAATATGAAATTGATGGTAAAGTTATAc
cagaaaaattggatcattaattttttcggttttttgcatgaaagtagggt
accatcataggtaaaagatggctcaagcagatttttgcaaacaaATNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNaactataaaccctcgaatgtgacg
gagcccgattttcgaaatagtatttttgggcaaatttgggccaaaaaacg
gctaaataAACGggtttgattttttgcatgaaagtaggtaaaagatggct
cgaacagtagatttttgtgaaaaaaagaatatttcaagagcatgaaattt
tggtttcttaacgtttttctataagaaacaaacgactaattttaatagat
cgtcactatttgttcTGAATAATtatttaatggtcacgctcacgtagata
tcaattatatatgtgttaaatgcataaccaggtaggtccataaaagtatc
acttgttttttacAGAATTGAGCAACAAAGTTGACCAGCTATCAATGGAA
TCAAAATCTGTAAAGGGTAAAGCTTTAGctatgatttttattttctctat
CCATGCTTAACCCTAATCGtactaaggggggggggctgcttctgttcgga
ggtcaaattaaTGGTagtagctcctgaaataatagaacTTTTGcgatgaa
attttctgtaaattcctaacttttatttagcttcaaaataaaaaaaattt
tgacacctaaaaattttcacacaaaaattaacaCTGTTCcaatataaatt
tatttttatgtcaaatatatcgtttaaactgtaatttattgaatatttag
gatataataagcattttagactcagccaactttttctaaagcctttgttt
gAATACATcggctatttataagaacaaaggaaattttaagctttttctca
CTGtaggcatgatgagtgacgtcatcaaaaagattttttgtcaacAGTTG
CCTTTTAATGACAACGTTCTTgtatgccaaatttcattcaaaaagaccca
ctagatcaaaagataggggtggtacaggaaaagccccccccccccccctt
ttttaaccccccccaaaaaaaaaaaagggggggtacaggaaaagcccccc
cccccccccttttttaaccccccccaaaaaaaaaaaagggggggtacagg
aaaagcccccccccccctagttttgaactgcccctaaaagcctagtaagA
ATAGGGTTAAACCTGAATTTATTCAAAGAAACATTATATGTTTTGTATTC
CTTCTAGATACAACAAAGACACATTGGAATTTACCAGAGCCTGTTTCCAT
CTTCTTTGGACGAGAAAATTTGATTGAATCCATTCACttgaaaattcaac
aaaatgaaGCAATTGCTTTGAGTGAAATGGGAGGTGTGGGAAAAACACAA
ATTGCTGCAAAGTTCGTTCAAATGCACAAGGATGAATATCAGAAGATATT
TTGGATTTCTGCTGTCAGCCTCAAAAGATCTTTGAGCGAGATTTTGTGTG
CATTTGGTTGTAAACAACTAATACCTGATGAACCTTCGATGGAAACTCTG
ACTTTCATTTTCCTCTCTAAGATTTGTGAAGGCTCCAAAAAATCGCTGGT
TGTATTGGATGACGTCACTGAGGTCACAAAAGACGTCACTTCATTTATTC
gaaatatgaaagaaaaaatcagcTTATTGTTGACATCTCAATTGAAAGAT
TGGGAAGATTATGGCTTGATTCAAATTGCTGTTCCATGTTTCCAAGAACA
AGAATCCATTGGCTTCTTACAGAATGAACTTTCTTCAGCCAGCCAACATG
AAATCTCCATTTTAGCGAATCGTTTACAATCATTACCTTTAGCCCTTCAC
CAAGCCATTTGTTacatcaaaaaacataaaattcctCTACACAAATACAT
CGAACAATTTGAAGTTTGCAGAGAAAGTGTTTTGGGAATGAAAATCAATT
CTTTTACTGAATATGACAAAACATTGTTGACAGTTTGGGATTTGGCTTTT
GAGAAAATTCGGGTCGAATCAAAGAATGCTCTTTTGTTCTTGGGAATGAT
GGCTTTCATGGACaatcgaaaaatcaataaaaagacaTTCAGCTATTTTG
ATAAAGTTGACGAATTTGAATTAAATGAAATCATAAATCTGCTTTGTCAA
TATTCATTGGTTGGCGAGCGGAACGAATGTTTAGAAATTCACAGTCTCGT
GCAAAAAGTTATCCGATATCGTATTGAACAAAAACAATTTGTTGAGGATG
AATGGCCGTTGACACTTCTTGAAGATGTTCTTTTGAAAATCGAGTCTTCT
GTTGAAGATTTGGTTGCAAATGATGACTACGAGGATTTATGGTACATTCA
TGTTTTTCGCTTGATCATGAGTGGTGCACTAAAAACTATCAACTTTGATG
TTAACCAGGTGTTAAATATCGCCGCAGGCAGAATGGAGATGGAAAACTTA
TACCTACTTGCTGAACTTCTTTCAAAAGCCTTGTTAAAACAATATAGGTT
GTTTCGAGATGTGAAAACTTTTTATACGTTGTTGCTTGTTCATCATCGTT
TCATAAACGCGTCTATTAAATTAGGTTTACTTAATGTGAATGAAATTATT
GCTTTTGAAAAAGAGTTTTCCACAGAACTTGAAGAACATTCTGTAGAAGT
TTACCAGTGGAAGCTAAAGCAAGCTGAGTTATATAATATACATGGAAGAG
CGTTGTTATGCAATAATATCGTTCGAAATTTATTCAATGAACTGGTCAAG
AAGAAAGGATTTGATGATATTAAATTAAGATTGGCGAGTTTTTTTACTGT
AATTGATTTTGAAGCTTTGTTGAATTCCGTTGACACAAATAATCTCAGTG
ACACGGACTTTCTGATGTATTATCATGCGAAATGTTCTTTATACATCAAG
AAGGGTTGCTTTGATTTGGCTGAACAAACCATGAAGAATTGGAAAGAACA
CATACACAGAAAACAATTTTCTCGATTATGGCActttaatttcacaaaaa
agaatTGCTTTTTACTTTACAAGAAAGGAGATTATAACGAAGCACTACTT
GCTTGCGATGAACTTAAACGAGACATTGTTTTTACTGATGCAGATGTTTT
AATTTTGGAAGCATTGGTTTTGATCAAATTAGGAAAGTTCGACGATGCAG
AAGTGTTACTTGATGACTTTAATCAACGCAATAATGGAATTATCATTAAA
ATCAGTTCATACCTGAAATTTCGAAAGCACGACTTTGAGGCAGTAGTAAA
GCTCCTCTCTGATGCGGAAGATGAGCGTTtgtcaaatcttttgtttttgg
tAAATGAATATGCGAAACTGCATCGACAACTCGAAAATAATAAGTCGAGA
GAAATAGTTGAACGATGTTTGCAAATGAAAAAAGTTGTAAATGAATTATT
TCAAGTACAATTGGATATGATTTATCTTTGAAATCTTATTATATGGAATT
ATGATTAGAATTGGATCTTTGGGAATTACTCCAACTTTTAAGTGCAGGCT
ATACTGATAAGTTTTTCAAGTGCCAGCAATGTAATTGTTGCATTGATTTG
GCCTGTATAATCAGAAgtagtgtttttctttttaattatgaaaataattG
AGGAGttggtttcagggggtacctgatTCCGCCATTCGGTCAAGTTTTTG
TCAAATTTCCGTCACACCGTCAAGATTAAGACCGAAATTCCACCACCGAA
ACTTTCctatgaaattgatttttttctcgaaaattccagaattttgactt
tttggtgCAAATTCCGAAATTTCGAACGAtttttcgccaaattaaatttt
tccagACCAAAACAACCCAATTTTCTGTCTTCGACAGTAGACCTAAATTC
CGCTAATCCGTCTAAATTTCTAAAGGTCTTGAAGTTTTGTGTTGAATTAG
AGGATTAAATGTTATGAAATAGAATTATGGGTAGACGAAATTTTTGGAAG
GCAACATTCCAAGGATATTTTGAACAAAGtcggttgtttggaagtaattt
tatcattgatttatttttgattggaaataaaaattttgcattttttttta
aacaaggtTTAAATTCACGATTTTCTTAGTTTCTTAGCTGAAGCGGCCTA
TCATCACCcagattttcttcttttaataagaattattttgtaagaacaat
gAGGTCCCCAATGAGGAGATCAagaataagaacatttcaagaacagTTAT
ATACTTTAAATTTCGAATCGGTCGAATCACTCATAAAAGATAACGACGCG
GAGTACGTccaaaatcttttgtttttggtAAAAGAATATGCCAAGCTTCA
CggagaactcgagaaaattaaATCGAAAGAATTGGTTGATAAGTGTGtgc
aaatgaaaaaatatctaaatcatcTCTTTGAAGAACGTTTAGAATTTATT
GTATGTTAAGTCAAAGGTTATTTTGATCAATAGGTACAGGGATTTATACG
TACCCCCAAAATTCTCGAATAATAAATATTGTAAGATTGAATAGGTACTA
GTTCATTAACCTATGGTTTTACTGATAATGGCCATCTAGTTAACTGTTAG
TTTCTGGGTTTGGTTTAACTATATTTTTCTTCTCCTATGTTAGATAGTAT
AATAACAGCCTTTCGTGTTTGAAGCCTTTTTCTGCAGCGTTTTGATTTTC
GCTAGCAATTTTAACCTGCCGTATATTTTTTCCGGGGATAATGTTGATTT
GCATCAACATTTTTAGCCTAAACACAGATGATATTGGTAATTCTTACGAC
CTGATTAGTGTCCATGACTTTTATAGATTTTAACAAATGAGTGACAACTG
ATTCCTCATCATTGAATTTTGAGTAATCCATCATATTTCTAAATTTGTag
tattttaaaatatttcataagcGCTATGGGAGACCATCTTTTGAAATTAG
ACTAAGacttcattttcgatttcaacgCAGTTCAACgagaaatatttcaa
acgattttcAAAGTCCATCAAAGTCACACTCAATTGTCTAAACACGATCG
GTAGCCACGATGTTTAAGGAatcccttttttattttgaagtttttaggat
aCAAATTTTTTGTGGTGAGAACTAGCATTTAAATGTTTTATAATATATAG
TTTTTTTGTGCTTTCTTCGATGTAATGAATAAGTGACAAGTCGTTTGTGA
CGACGGCCTCGGACCGCTAGTTAGATAGTATTTCCCGAACTAGCTTTaga
ttttaactgtttttgaaataatattttcataataaggaaaataaaggttt
ttgattactttaaatagtttttaaaattgaaagctATGCATAGTCATTAG
TATATTTAGTCACAAGTTTTACCAACGACTACAAAGTCTTATTCATTCTT
CTTTCCACAACTAAGCTACCCTTGAGATTTGAATGGTTTAATTTCTAATT
CCAATTACGATAAAAAAGATCGGGTGTTGCAGGGCTATTATGTTACGCTT
TACACTTcttattattattgttttttttcatatcaGTGTAGTTTTTCAAT
CAAACATTTGGGACAACTTATGCAGACTTATGTTAAAATGTTTACATATT
TACATTTGTtatgctttttatatttttcagcaaaaacaaaagattaagaa
aataaaaagaaataaatgaagAGAATGAGATGAGTACACCATTGTACATC
CTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCTGAAT
CTTGTTAACTTTTTAACCTCTTGACACTGAATTCTGGTGTCATTGAATAT
cagtttttgttttactttagaTCTAGCCAAGTCAATGAATATGAAAGCTG
ATAAAGATGAAATGGATggtatgttttgtttctttacTTGTTTTATATTT
TGGAGGAAATTGTAACCTCAAAAGCATATCTGATAATTAATATCTAATAA
AAAGTTGGAGGCTACCCGGGTATCTACCTTAAAAAGCCTCTCTGAAGATT
GTCTAATAAAAAGTAGGAGGCATCGCCAAGTTGACGTTCTAAATAAAACT
GatccttttgaaaaatattcatttcttCTTGTTATATATGTTACAGTTTT
TCGACATCCTCTGTATTATAAGAAGctttttgtaatatattttcacTATC
TTTCTGTCTGAATAGGCATTTACCGATAAAAATCACTATTTGTTTTACTG
CAGGTTTAGCCAAGTCAATGGATAGTAGACTGAATACGAAGGCTGATAAA
GATGAAATGGATggtatgttttatttatttacttattttatAGTTTGGAG
TAAATAGTATCCACTTTAAAAGCCTATCCGATGATTGtctaaaaaaatta
cgagacaTCGCTAAGTTGACGTTCTAAATGAAATCGctccttataaaaaa
tattgaatttttctgtttgaataGACATTTCCCGATAAATATCACTATCT
TATATTAACTATTTACTTTAGGTTTAGCCAAGTCAATGAATACGAAAGCT
GATAGAGATGAAATTCatggtattttttgtttgtttaattctttttggac
ctacctccgggtgccccggtggaggttctataaattaacccatgtccgtt
cgtccgttcgtccgtccgtctgttcgtccgtctgttaccagcttttctca
ggattggctcattagttttttctgattttttgcacaatgatgcaaaatgg
caatgcccagaacgtgacggagcccgatttttgagaaaaaatttatttgg
gcaaatttgggccaaaaactacctaaaaatagggttttttgaagtttgtg
caaaatcctgttattacttttttctgattttttgtacaaagatggagggc
aagattctctaaagaatggctgaagtggtttttcccggaaaattcttatt
cgcctgaaaaaacggattttcgtattttgggggaaattccctttaaccaa
ataagaaaatatagcttttaagaatgttgactcattatttttttctgatt
ttttgcacaatgatgcaaaatggcaatgcctaaaatgagtcggagcccga
ttttcgaataaaaatatatttgggcaaatttgggccaaaaactgcctaaa
aatagggttttttggactttgtgcaaaatcctgtcattgctttttctgat
tttttgtacaaagatggagggcaagattctctaaagaatggctgaagtgg
tttttcccggaaaattctttttcgccttaaaaaacggactTTCGTATTTC
gtaattattttgggcaaatttgggccaaaaacagctgaaaaggttttttg
ggcctgaatggtttaagtgattttcgtatttggggaaattcctttttacc
attttacatNttcgccttaaaagacggattttcgtattttggggaaattc
cctttaaccaaataagaaaatacagcttttctcaatgttgactcataatc
tttttctgatttattgcacaatgatgcaaaatggcaatgcccaaaatgtg
acggagccagatttaaaaaaaaaaaaattattttgggcaaatttgggcca
aaaacagctgaaaaggtttttttgggcctgaatggtttaagtgattttcg
tatttggggaaattcctttttaccattttacaagATAAATTGACGTTGAA
GGCTGACATGTGCCAAATTGATGGTAAAGTTATACCAGAAAAATTTGTTG
TGTTTGTCGAATGTTTTTTCCTCCTCTTTTGAGGTGGTCTGCTAGcaact
tttttcatcaaaataaaactttggcgttattcagatttcaaatgTATCTA
GtcgatgaaaaatgtttcaagtgtTCCGAGACCTTTACAAATTTCCTCTG
TTGTCTACACGaagtttatttttattcttttaacgGAATATTGCTGAATA
AGAAGGCCTTTTctgataaatataatttttggacctaccccggtggggtg
taggtcctataaattaacctgtgttcgtttgttcgttcgtccgtccgttc
gtccgttcgtccgttcgtctgttaccaacttttctcaggattgaatcata
ggaatcttttgatttttggtaaaaaaggTGCGAAATGGTGATGGCcagaa
tgtgacggagcccgattttcaaaaaaaagttttggggcaaatttggaccA
TAAAACGGCTAAAgaacggtttttttggactttgtgaaaaattggatcat
taattttttcggatttttttgcatgaaagtagggtaccatcataggtaaa
agatggctcaagcagatttttgcaagcaaattttgttggctcaaaaaacg
catgtgtatctataagaatcactattaataagcatacatcaatgttcgta
gtcaaattactcaattttttatgagatagatgtttttttgctcatgaggg
cttacttttgaagaatatgtgtgtttagacNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNtgaagaatatgtgtgtttagacatgaaattttggctgcttgacg
tgtttttatagaaaaactggccaaattcgatatctttttataagcacatt
atcaataattacttaggtattagcttttcaagagattggctctttcattc
ttaatgattttttgcacaaagatgcataactataaaccctcgaatgtgac
ggagcccgattttcgaaaaaagtgtttttgggcaaatttgggccaaaaaa
cggctaaaaaaacgggttcgattttttgcatgaaagtaggtaaaagatgg
ttcatttttgtgaaaaagtgaattttcagctcaaaaaaggcatgtttatc
tataagaatcgctattaataagcatacatcaatgttattagccaaataac
tttttttgctcacgaagtcttgaatatgaaagaatatttcaagagcatat
aagaaacaaacgactaattttaatagatcgtcactatttgttcTGAAtaa
ttgtttaatggtcacgctcacgtagatatcaattatatatgtgttaaatg
cataaccaggtaggtccataaaagtatcacttgttttttacAGAATTGAG
CAACAAAGTTGACCAGCTATCAATGGAATCAAAATCTCTAAAGGGTAAAG
CTTTAGCTATGATTGTTATTTTCTCCATCCATGCTTAACCCTAATCGTAC
TAAGGGGGGGGCTGCTTCTGTTTGGAGGTCAAATTAATGGTAATAGCTAT
ATATAATAGATTTTAGACTCAgccaacttttttctaaagcctttgttaga
ttgcattagctatttataagaacaaaggaaattttcagcttttcctCACT
Gtaggcatgatgagtgacgtcatcagaaagattttttgtcaaaagttgcc
ttaTATGACAAGGTTCTTgtatgccaaatttcattcaaaaagaacCACTA
AATCAAAAGTTAATGGGTGGTACAAGAAAacccccctagttttgaactGC
CCCTAAATTTATTCAAAGAAACTTTATTTGTTATTTGTCACCTTTTTTGT
ATTCATTCTAGACACAACAAAGACACATTGGAATTTGCCAGACCTTTGAT
TGAATCCATTCACTTGAAACTTCAACAAAATCAAGCAATTGCTTTGAGTG
AAATGGGAGGTGTGGGAAAAACACAAATTGCTGCAAAGTTCGTTCAAATA
CACAAAGATGAATATCGGAAGATATTTTGGATTTCTGCTCTCAGCCTCAA
GAGATCTCTGAACGAGATTTTGTGTGCAATTGGTTGTAAACAACTAATAG
CTGATGAACCTTCGATGGAAAATCTCACTTTCGTTTTCCTCTCTAAGATT
TGTGAAGGCTCCAAAAGATCGCTGGTTGTATTGGATGACGTCACTGAGGT
CACAAAAGACGTCACTTCATTCATTGgaaatatgaaagaaaaaatcagcT
TATTGTTGACATCTCAATTGAGGGATTGGGAAGATTATGGTTTGATTCAA
ATTGCTGTTCCATGTTTCCATGAACAAGAATCCATTGGCTTCTTACAGAA
TGAACTTACTACAGCAAGCCATCAAGAAATCTCCATTTTAGCGAATCGTT
TACAATCATTACCTTTAGCCCTTCACCAAGCCATTTGttacataaaaaaa
aataaagttcctcTACACAAATACATCAAACAATTTGAAGCAtgcagaaa
aagtgttttgggAATGAAAATCAATTCCTTTACTGAATATGACAAAACAT
TGTTGACAGTTTGGGATTTAGCTTTTGCGAAGATTCGGGTCGAATCAAAG
AATGCTCTTTTGATCTTGGGAATGATGGCTTTCATGGacaatcgaaaaat
aaaaaaaaagacattcttttattttgataaagttGACAAATTTGAATTAA
ATGAAATCATCTCACTGCTTGGTCAATATTCATTGGTCAACGAGCGAAAC
GAATGTTTAGAAATTCACAGTCTTGTGCAAAAAGTTATCCGATATCGTAT
TGATCAGAAACACTTTGTTGAGGATGAATGTCCGTTGACACTGCTAGAAG
GTGTGCTTTTGAAAATCGAGGTTTCTATTAAAGATTTGTTTGCAAATGAT
GACTACGAGGATTTATGGTACATTCATGTTTTTCGTTTGATCATGAGTGG
TGCACTCAAAACTATCAACTTTGATGTTACCCTGGTGTTAAATATCGCCG
TAGGCAGAATGGAAATGGAAAACTTATACCAAATTTCTGAActtctttca
aaagatttgtTAAAACAATATCGGTTGTTTCGAGATGTGGAAACTTTTCA
GACATTGTTGCTTGTTCATCGTCGTTTCATAAACGCGTCAATTAATTTAG
GTTTACTTAATTTGAATGACATTTTTGCTTTTGAAGAAGAGTTTTCCTCA
GAGCTTGAAGAAAGTTCTGTAGAAGTTTACCGTTGGAAGCTACTGCAAGC
TGTGGCATATAATATACGTGGAAGAATGTCGTTATGCAAAGATATCGTTC
GAAATTTATTCAATGAACTAGTCAAGAAGAAAGGATTTGATGATGTTAAA
TTAAGATTGGCGAGTTTTCTCCCTGTAAGGGTTATTGAAGTATTGTTGAA
TTCTGTTGACACAAATAATCTCAGTGACGCTGACTTTTTGGTGTATTATG
ATGGAAAATGTTCTTTATACATCCAGAACGGTTGCTATCTTTTGGCTGAA
CAAACCATGAAGAATTGGAAAGAACATTtacacagaaaaaaaatttctcg
atCGTCTCAGATTAACTTCACAAAAAAGAATTGCTTTTTTCTTTACAAGA
AAGGAAATTACAACGAAGCACTACTTGCATGCGCTGAACTTAAACGAGAC
ATTGTTTTTACTGATGCAGATGTTCTCATTTGGGAAGCCttgattttgat
caaattaGGAAAGTTCAACGACGCAGAAGTGTTACTTGATGGCTTTGACC
AACACAATAATATTATCATTGACATCAGTTCATACCTGAAATTTCGAAAG
AACGACTTTGAGGTCGTAGTAAAGCTCCTCACAAATGTGGAAGATGAGGA
TTTgttaaatcttttgtttttggtAAAGGAATATGCAAAACTGCATCGAC
AACTAGAAAATAATAAATCGAGAGAATTGGTTGAACGATGtttgcaaatg
aaaaaaattgtaaatgaaTTATTTCAAGTACAATTGGATTCGATATGTGT
TTGAAATCTTATTATATGGAATTATGATTAGAATTGCATCTTTGGGTATT
ACTCCAACTTTTGGCTAAACTGATTAGTTTTTCAAATGCCAGCAATGTAA
TTGTTGCATTGACTAGGCctgtaaaatcaaaatttctttttaattatgaA
AATATTCTATGGGATGGTTTCAGTGGGGACCTGATTCCACCATTCGGTCA
AATTTGTGTCCAATTTCCGTCACACCGTCAAGATCAAGACCGAAATTCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042709XLOC_042709Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068440-exon-scaffold_485-1491911889:8194..8237TCONS_00068440-exon-scaffold_485-1491911889:8194..8237Clytia hemisphaericaexon
TCONS_00068440-exon-scaffold_485-1510915933:8194..8237TCONS_00068440-exon-scaffold_485-1510915933:8194..8237Clytia hemisphaericaexon
TCONS_00068440-exon-scaffold_485-1575043694:8194..8237TCONS_00068440-exon-scaffold_485-1575043694:8194..8237Clytia hemisphaericaexon
TCONS_00068440-exon-scaffold_485-1491911889:10122..10181TCONS_00068440-exon-scaffold_485-1491911889:10122..10181Clytia hemisphaericaexon
TCONS_00068440-exon-scaffold_485-1510915933:10122..10181TCONS_00068440-exon-scaffold_485-1510915933:10122..10181Clytia hemisphaericaexon
TCONS_00068440-exon-scaffold_485-1575043694:10122..10181TCONS_00068440-exon-scaffold_485-1575043694:10122..10181Clytia hemisphaericaexon
TCONS_00068440-exon-scaffold_485-1491911889:20187..20237TCONS_00068440-exon-scaffold_485-1491911889:20187..20237Clytia hemisphaericaexon
TCONS_00068440-exon-scaffold_485-1510915933:20187..20237TCONS_00068440-exon-scaffold_485-1510915933:20187..20237Clytia hemisphaericaexon
TCONS_00068440-exon-scaffold_485-1575043694:20187..20237TCONS_00068440-exon-scaffold_485-1575043694:20187..20237Clytia hemisphaericaexon
TCONS_00068440-exon-scaffold_485-1491911889:20655..23043TCONS_00068440-exon-scaffold_485-1491911889:20655..23043Clytia hemisphaericaexon
TCONS_00068440-exon-scaffold_485-1510915933:20655..23043TCONS_00068440-exon-scaffold_485-1510915933:20655..23043Clytia hemisphaericaexon
TCONS_00068440-exon-scaffold_485-1575043694:20655..23043TCONS_00068440-exon-scaffold_485-1575043694:20655..23043Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_485supercontigscaffold_485:8194..23043 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.291135	0.22351	0.164728	0.135135	0.646585	0.204341	0.968591	0.954858	0.659577	0.704818	0.658194	0.806831	1.81252	1.90995	0.59717	0.599362	0.181891	0.424734	0.868182	0.464354	0.758464	0.896214	0.539012	0.510166	2.63557	4.56857	1.26734	0.658813	0.652131	0.630617
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068440 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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