TCONS_00068414 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068414
Unique NameTCONS_00068414
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length231

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068414 ID=TCONS_00068414|Name=TCONS_00068414|organism=Clytia hemisphaerica|type=transcript|length=231bp
CTTCAAAACTAATCAGCCGTGCACGTCCTAAACGAAGACATTCCAAAGAG
CTTTTACcaaactttgctaatgacggctTCAATGGACCCCAAACTAAATC
GTTCTACGATAGATGTGTGCCAACGTGGAATAAACTACCAAGAGAAGTTG
TATCCGCACAATCGATTAAGTCGTTTAAAGAGAAACTGAATGATGCATGG
AAAAACCATCCACAAAAATTTGTTACAAGAG
Run BLAST on NCBI

transcript from alignment at scaffold_483:221417..221647

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068414 ID=TCONS_00068414|Name=TCONS_00068414|organism=Clytia hemisphaerica|type=transcript|length=231bp|location=Sequence derived from alignment at scaffold_483:221417..221647 (Clytia hemisphaerica)
CTCTTGTAACAAATTTTTGTGGATGGTTTTTCCATGCATCATTCAGTTTC
TCTTTAAACGACTTAATCGATTGTGCGGATACAACTTCTCTTGGTAGTTT
ATTCCACGTTGGCACACATCTATCGTAGAACGATTTAGTTTGGGGTCCAT
TGAagccgtcattagcaaagtttgGTAAAAGCTCTTTGGAATGTCTTCGT
TTAGGACGTGCACGGCTGATTAGTTTTGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042687XLOC_042687Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068414-exon-scaffold_483-1491911889:221417..221647TCONS_00068414-exon-scaffold_483-1491911889:221417..221647Clytia hemisphaericaexon
TCONS_00068414-exon-scaffold_483-1510915933:221417..221647TCONS_00068414-exon-scaffold_483-1510915933:221417..221647Clytia hemisphaericaexon
TCONS_00068414-exon-scaffold_483-1575043694:221417..221647TCONS_00068414-exon-scaffold_483-1575043694:221417..221647Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_483supercontigscaffold_483:221417..221647 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.11846	4.05466	8.23873	5.75736	22.2334	11.0773	36.0835	61.0968	20.0025	11.9351	5.2657	8.57248	5.30896	9.20436	9.34092	5.70091	6.24271	3.99911	0	3.4689	6.92479	8.82398	2.38371	3.25071	10.0445	6.88301	12.8281	4.5635	5.76875	5.87744
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068414 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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