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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068409 ID=TCONS_00068409|Name=TCONS_00068409|organism=Clytia hemisphaerica|type=transcript|length=1312bp
ACTAGTGCCCAACCCTCCGAGATTGAGTCATACTGTTCGCGTGCCTTATC
GTGAAATTTTGTCAGCCTTGTCCTAACATGTAATACCTTTATGGTCCTTT
GATCCATCTATAATTTAATTTACTGCATACAGTATGTGATTTTTGAACAT
GTTTACATGAAATAAGTAACAACACGAAAAATGCAATCAAAAAAGCATGA
ATAAGTCGACAAAACGCCAGCCCTTGCTATGTGCTTAATCCAATTTTGAT
ATTGTAATTTTATTTATAATTCTTTGTACTGTTTTTATTCATTGTTTACT
ATTACATCTTTCTCAACaagaaaatttactttttatacAGTTTTGTATAC
GTGTGTATATGTGTATGTGTGTTTTCTGTTgagatgaaaacaaaaaattt
ctgaTTGATTGATGATTGTTGGTTAGTGTCGTCGTGGTGCTCTGATACTG
TTCAAAATTCAATGGTCAAGTCcttaaattattcttattttgttcttatt
tttagacAGAATATGAAGCCAGTTTGTTGTTGAGAGAGGGAAAGAGGGGA
GAGAGTTATTCATCTTAATCAGAGGAGGTGGCcttaaaatatacaaaaac
atgaTGTTAGAAAATCACCTCGGAAGATGACAAATAAAGTCTCTAACTTA
TATACAGTACAGGGTGATTCAAAATTtcacttcttttctttttcttcata
cattaataatcttttcaaaattttaagttataaaattcaaaattccatat
ttaaaatgaatgtaaaaaaattacGGCAGAAAGTCTAGGGTGCGGTTTTT
TTTTGAATCACACTGTAGatgtaaaatagaaaaatctagTATTCTAGACA
CATAAAACATTTATAGATTTTCTTAATTCACCACCAAGATCAAACCATTT
TATGTTGATTCAAGTTTGATTTCATGCGTTCCAAGGTTCATTGTGTGATA
CAATAAAATTGCATCTTTTCTGCTAAGAGCCAAGTTAAGCTAAGCTTGTA
TCAAACTTAAACATCTTGGTCAAGGTTAAGCAAGACTATGATTCGTATAT
AATAGAAATAAAATTTGCCGGAAGATCACGCCAGCATGAGACACCGTGTA
GCAATTGTAAGTTAGCTCTtcatttttttggggggggggcgtacggggtg
cGATGTCCGAAATACCAAATAATATTGCTAAAATTTCCGAGATTctataa
aaaaatacttgcaatttccataccgattttttgggtatttttcctcgttt
tgactaatttttcatcaaatttgatttttcatgtataaattccgaaaaag
ggggataaaaac Run BLAST on NCBI transcript from alignment at scaffold_483:107049..108360 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068409 ID=TCONS_00068409|Name=TCONS_00068409|organism=Clytia hemisphaerica|type=transcript|length=1312bp|location=Sequence derived from alignment at scaffold_483:107049..108360 (Clytia hemisphaerica)
gtttttatccccctttttcggaatttatacatgaaaaatcaaatttgatg
aaaaattagtcaaaacgaggaaaaatacccaaaaaatcggtatggaaatt
gcaagtatttttttatagAATCTCGGAAATTTTAGCAATATTATTTGGTA
TTTCGGACATCgcaccccgtacgccccccccccaaaaaaatgaAGAGCTA
ACTTACAATTGCTACACGGTGTCTCATGCTGGCGTGATCTTCCGGCAAAT
TTTATTTCTATTATATACGAATCATAGTCTTGCTTAACCTTGACCAAGAT
GTTTAAGTTTGATACAAGCTTAGCTTAACTTGGCTCTTAGCAGAAAAGAT
GCAATTTTATTGTATCACACAATGAACCTTGGAACGCATGAAATCAAACT
TGAATCAACATAAAATGGTTTGATCTTGGTGGTGAATTAAGAAAATCTAT
AAATGTTTTATGTGTCTAGAATActagatttttctattttacatCTACAG
TGTGATTCAAAAAAAAACCGCACCCTAGACTTTCTGCCgtaattttttta
cattcattttaaatatggaattttgaattttataacttaaaattttgaaa
agattattaatgtatgaagaaaaagaaaagaagtgaAATTTTGAATCACC
CTGTACTGTATATAAGTTAGAGACTTTATTTGTCATCTTCCGAGGTGATT
TTCTAACAtcatgtttttgtatattttaagGCCACCTCCTCTGATTAAGA
TGAATAACTCTCTCCCCTCTTTCCCTCTCTCAACAACAAACTGGCTTCAT
ATTCTgtctaaaaataagaacaaaataagaataatttaagGACTTGACCA
TTGAATTTTGAACAGTATCAGAGCACCACGACGACACTAACCAACAATCA
TCAATCAAtcagaaattttttgttttcatctcAACAGAAAACACACATAC
ACATATACACACGTATACAAAACTgtataaaaagtaaattttcttGTTGA
GAAAGATGTAATAGTAAACAATGAATAAAAACAGTACAAAGAATTATAAA
TAAAATTACAATATCAAAATTGGATTAAGCACATAGCAAGGGCTGGCGTT
TTGTCGACTTATTCATGCTTTTTTGATTGCATTTTTCGTGTTGTTACTTA
TTTCATGTAAACATGTTCAAAAATCACATACTGTATGCAGTAAATTAAAT
TATAGATGGATCAAAGGACCATAAAGGTATTACATGTTAGGACAAGGCTG
ACAAAATTTCACGATAAGGCACGCGAACAGTATGACTCAATCTCGGAGGG
TTGGGCACTAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068409-exon-scaffold_483-1491911889:107049..108360 | TCONS_00068409-exon-scaffold_483-1491911889:107049..108360 | Clytia hemisphaerica | exon |
| TCONS_00068409-exon-scaffold_483-1510915933:107049..108360 | TCONS_00068409-exon-scaffold_483-1510915933:107049..108360 | Clytia hemisphaerica | exon |
| TCONS_00068409-exon-scaffold_483-1575043694:107049..108360 | TCONS_00068409-exon-scaffold_483-1575043694:107049..108360 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_483 | supercontig | scaffold_483:107049..108360 . |
Blast
The following BLAST results are available for this feature:
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