TCONS_00068374 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068374
Unique NameTCONS_00068374
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1025

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068374 ID=TCONS_00068374|Name=TCONS_00068374|organism=Clytia hemisphaerica|type=transcript|length=1025bp
GGCCCTTAGGGGAACGCGCGCGAGGATTAAAAGTAAAATGGTAGCTTACC
TTGCACGATTTTTTCGACCAAATTGTGGAGCTATAGTTTGAACGAGTTGA
GATATTTTACACAGAATCactgattttctttaaaatgaagACCCAGaaac
aaaacgACTTGGAATCTCCAGTGGTGTTGGTTACCAATAATGCAACCACT
CGCCACACAACTAACCTTcgaacagcaacaacaacaacgacagCTGTATT
ACAATGACCACAATGTGGAAAATAACATCCCAGCCAAACCACCACCCGAT
AAACTATCATCAAACATCACCAGTCCTTCATCCACGTGTGCTTCTATTCA
GCTAGATTATCCTTTTAGTTATAATATcaataataacaacaataacGCTA
CAAATAATACACTACCAGTCTCATCAGTAGATCACAGACAGTACTTATAC
GATTTAGCTATCAACGTTGATAATTATAAACCCTCATCTGTGCAAGCAAC
TTCATTATTTAATACTTTATCGAATGCCAAGAGGAGCATCAATTTGAACG
AAACAACGCAAAATGGTTTACATAATAAACAAAGAACGACATGTAACATT
GAGAGATCGATAAATTATAATGGTGATACttttaatgataaaattttacc
AAGGAATCATAATATTCGGAATAATAAAAGCCCATCTGATAGTGACATTA
CCAAAAATGGGGTTCCGAACGGCCATCATGGACCTTTAAGACCTCTATCC
TTAGATCTAACAGAAACGACACGTCAGATACTGCCGAGGCTATCACCGAT
TAGAGACTCAGACAATTTGAAGTCAGTTTTCAGTACGAAGCCCATGATAT
CGTCAAGTTTAAGTATGAATGGAAAGCAGCTTTCTTCTCTGCAAATGAGG
CACCATAAAATGATCTTGAACAATGACACGACTAATGAAATCCGACAAGA
GAGAGTAAGtgattttattttatgtttCCATGTGCTCCGATTATGTCAAT
GCTTAGCCTTACCAAGCTCTTTTTC
Run BLAST on NCBI

protein sequence of TCONS_00068374-protein

>TCONS_00068374-protein ID=TCONS_00068374-protein|Name=TCONS_00068374-protein|organism=Clytia hemisphaerica|type=polypeptide|length=278bp
MQPLATQLTFEQQQQQRQLYYNDHNVENNIPAKPPPDKLSSNITSPSSTC
ASIQLDYPFSYNINNNNNNATNNTLPVSSVDHRQYLYDLAINVDNYKPSS
VQATSLFNTLSNAKRSINLNETTQNGLHNKQRTTCNIERSINYNGDTFND
KILPRNHNIRNNKSPSDSDITKNGVPNGHHGPLRPLSLDLTETTRQILPR
LSPIRDSDNLKSVFSTKPMISSSLSMNGKQLSSLQMRHHKMILNNDTTNE
IRQERVSDFILCFHVLRLCQCLALPSSF
Run BLAST on NCBI

transcript from alignment at scaffold_483:133775..143900-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068374 ID=TCONS_00068374|Name=TCONS_00068374|organism=Clytia hemisphaerica|type=transcript|length=10126bp|location=Sequence derived from alignment at scaffold_483:133775..143900- (Clytia hemisphaerica)
GGCCCTTAGGGGAACGCGCGCGAGGATTAAAAGTAAAATGGTAGCTTACC
TTGCACGATTTTTTCGACCAAATTGTGGAGCTATAGTTTGAACGAGTTGA
GATATTTTACACAGAATCACTGATTTTCTTTAAAATGAAGACCCAGGTAA
TAAATATCCTTGATCTTTTAAAGCCATCTTCCTAATTATTTGAAATTAAT
TAATCAATTAATATTTATGGTGATTTTATGATAGCTGTAATAATTTTGAA
CCACAAATACCAGACTCTCCCACTTGATGATTACCGTGAGTATCACACAT
TCGAGCTGTGAAGACAAAGTGTGTTTTTTAAACAATATCTCTTGTATTAA
AACGCTCGCAAATTAGATATATTTCACGGTTTGGCTTAGATGAGGTTGCG
GATCATGTTTGATTTGCTTTTTCAGACAAGTTCGTGGGGAAATGAATAGT
GGAACGATTACCGTGAGATCGGGTAACTTGCTCTTGCATCAGTCAGTGGA
AGCTAACATACATAGCCCTCAAATGAAAGACTTGGCTGGTCATTAAAATA
CAAAGTTAAATCAAAACGAAAATGGTAGAGTAGAGCTGTGAGCGGAGCTG
TGTAGTTGTATTTTAATGACCAGATAGGTCATTCATCTCACTGACATACC
CTGAGATCGGGTGTAACTTGCATCAGTGGAGGCAAACATGCATAGCCCTC
AAATGACTGACCAATCGTATCTAAGCAGCAAAATTTCAAAACAAATTAAC
TACGCAGCTCCGCTTGCAGCTCTACTCTACCATTCTTGTTTTGATTTAAT
TTTGTATTTTAATGACCAGCTAGGTGATTCATTTGAGGGCTATGTATGTT
AGCCTCTACTGATGGATGTTAGCCTCTACTGATCCAGACGATCTCAATCG
AACGGAATCGACGATCGAACCAGTCGAACCAAATCGGAACGCAATCGACT
GATTGAAATTCGATTGTCGAACGCAATCGAATCTCAATTGAATATTACCG
CAATTTTCAGATTCAATTGATATTCGATTGATATTCGATTGCGTTCGATT
ACATTCGATTGCGTTCGATCGTTGATTCATTGACCCCCGGATTGTTCATC
GCATAATTTCTACGGGAAATCGAAAGCAATTTCATTCGGCTTGTCTTGTG
ATGTTTGAGACCTTGGATGTTGTGTTGGGAAGCTGCAAGAATAAAGCCAG
ACGATCTCAATCGAACGGAATTGACGATCGAACCAGTCGAACAACAATCG
AACCAATCGAATATTACCCAGAATNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNATTACCCAGAATTTTGACGTTCGATTGAGATTCGATTGCGTTC
GACAATCGAATTTCAATCAGTCGATTGCGTTCGATTTGGTTCGACTGGTT
CGACTGGTTCGATTCCGTTCGATTGAGATCGTCTGGACTGATGCAAGTTA
CCCGATCTCACTGTATGGAACTTTGCGATAGCTTGCTAACTCAACTAGAT
TTTCCTTGCAATTGTACCTAACTGGCGTATGGGTCAAATCAGTGAAGGCA
ATTTTTCAGTCCCTTTTGATAACATTTTCATACTTTATGATGAAGACAAA
AGACCCCCAGATACCAGGCTCTTTTAAACCACAAATTAGAAAACTTTATT
CATCATTTTACACTCCTTCTCTTCGTAAAATCCGTAAAATTCGTAAATTC
TCTNCAGTCCCTTTTGATAACATTTTCATACTTTATGATGAAGACAAAAG
ACCCCCAGATACCAGGCTCTTTTAAACCACAAATTAGAAAACTTTATTTA
TCATTTTACACTCCTTCTCTTCGTAAAAACTATCTCCAGATTATCTTTTA
AAGAAACAATTTTATTATGAAGCAAGATGGAACACACTCATTGGATTTTG
AATTAAGCATAAGTTGTTGCGATAAACAGACTGTACCTTTAAAAGGTTGT
TGAGTTCAGTCAAAACACAGATTTGATCTACAGCCTCACGCTTAACCTTG
TCTTAATAGAATGAATACATATTATGACACACAAATTGAGTGTTTTATTC
CCTAGGAATAGGGCTCATAGAAAATCTTCAAACATAGAAAAAGTTCATTC
CATTTGGGATAAAAAAAGCTGGGCGACTTTATTCATTCATGCCAGCTGTT
ATCTAAAATATTAAAAGACTTACCATTTTTTGCAAGACTCAATCGTTCCT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGTATAG
AATGGGCTTTAGAGGCTTAATTAAGCTAAATAAACAAGAAAATCAACTGT
ATTTTCTATAAAAATGTAAAATATAAAGTTCAAATCTGATGCCGATTTAA
ATATTTTCAAATGAATTTTGATTCATTTCGCTAGAAATGATTAAGATTTA
ATATATATCTATAATAATTCTGATCGAGTCCATCACAATCGTGAAGTGTG
TTGATCAAACGCAAACAAAACTGTTTTGCTGTTCATCAAATGAAAAAGTC
TCTTTCTGGAATCTGCAGCCATATCCCAATCACCTTCTATTAGGGTAGAT
CGTCAAATGGCAAAGTCAAAAAATTCAAAGTGTAGTATTTTTTTGTGAAA
ATTAATCTATTGTAAGACATTTTGCGCAATTTTTAACCTCCTAGGTAAAA
AATCCAGCATTCCCAAGGGGGTTCTTTGATTCGCACTAAAGCGAAAAATG
AGTAAAAATGGCATTTCTTTGCCCATTTTAAGCCTATAAAAGGCCAGGAA
AGGGTCAAAACGGTTTCTTAATGGTGTCTTGTACTAATATTCAACACAAA
AAGACAAAAGAACCCCAGCAAGATCGCTCAATGTCTCAATTTCAGGCTAA
AAAGGCTGATTTTCTCCGATTCTGGGTAGCAAAATGCACGAAAGCAGCAT
TTTTGAGGACCCACAACTTTTAAACTTTTTAAGGTACACACTTGAAATTT
TCAGCAATGAAACACTTGAGAGAAAGCTCCAGGAAAAATCAATCTTGAGT
TTTCAAAAATTTCCTATAAATCCATAATGGCGCCCTAGAAATTAAGTTTT
CATGCTATGCCAATATTTCAAGCTAAAACTTGGTTTTCTTGGGCTAAAAT
CTCAAAAATGATTTCAAATGATGTCCTAANATTATGGCATTGCATTTCCA
ACTAAAACGCGATATTTAGAGTTAAAGTCTGATTTTCTCAGGCTAAAATC
TCAAAAATGGTTTCAAATGGTATCCTGAAATCTTTTGGTGTTGAAAGTAT
TCTGGATATACTCGGGGAGAACCAAAATGGTTTGGGTTAGAAAGTTGCCA
AAGTCCGCCATTATGGAATACACCTATTTCANTTGGACGCTCAGTTCTTT
CGAAATAAGTGGGACAACATCTGAAATGATAAAGGTAGATGATTATGATG
ATGATTAAATTTCCTGCCGATGTCTAAGAGCAAAACACATGAACGAACAT
TCTTAAATACACCTATTTCCTATTAGCAGATTCATGCAAAAGTCACGAAA
AAACGTCGAGTAGACAAACTTTTGATTGGCGGAGGCATGCAAAGTTTACC
TCATACTCTGGACATTTTGAAAAATATGCTTGAATATGCAATATTTCAGC
CAATCAGAGACTTTCTCGACGTTTTTCGTGACTTTTTTACATGAATCCGC
TAATAGGAAATACGTGTATTACAGTTTCGTAAAAACCGCTCTCATCCATA
AATTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTTGACTCCTTGTGATGCATTAATGATT
TCCTTGAAATGAATGGCAGTTTTCAGGCCTATAACGTGCATTTAAGCAAC
TTTTACATAACAAAATTGACAAAAAGTTACCTTTTTTTGAGTTTTTGGCC
CAAATTTGCCTAATTTTTGGTCCCAAAAGGTGTTGAAAGCACCTAAATTA
TATCTTAAGTACTTCTAAATTATATTGAAACAACTTTGAATACTAAATGG
CTTCATATGGGATCATAAACAAGGAGAAATATCAGTAAAATGACGAAAAT
TGCCATTTTTGAGGTTTTGGGACCAAAATCGGCAGTTTTTGGTCCGGCAA
TTCCTGAAAATTGCATGAAATTGAAAATTTTTTTCAGATTGTTGTTATTT
GGGTAGAAACACCTCAAAAAAACTCTAGCACAGCATGATTTGAAGATAGC
CCCTGAAAAATGTTGATTTACCCTTACCCCTAATTTTTGTTGAGGTTTGC
TTTCTAGGCATATAAGTATCTTTTTATGAGGTTTACCCTAACTCGAGATA
CGCTTTTTTGAAGTGGGAGCCAAAGTTGAGGTTAACATGACCTGAGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNAGACTTTTGCGGCTTGTCAACCTCA
AAAACAGCTCATTTTAATGGGTTTTGTTTAAAAATCTATCTTTGCTTAGC
TTTTTTGCCTTACTTAAAACTTATTGTAATGTTCAAAGTCCAAATTTTGA
GGTTTACAGTGCATTTTAATAACTTCGACTTTGTCAACCTCAAATTAGGT
AACATAACATAAAATCTTGGTTCTTTTAACACTTTTTGTCTTGTTTAACT
ATCCAGGAGGCTATTCTCACCATTTTTTACATTTCTTTTTTAGTTCCCTT
TTCTGAGGATGACATTTCCTTGAAATGGTCATTTTTGGTCTGTCAACCTC
AAACTGGCTCGAATAAGGGAAATACCTATATCCATGGCTTTGTCTTCATT
AGCTCTATCACCTCCTGAAATCTTATTTCAGGATACCAAGATTTGAGAAA
GTTATTGACAAAATTTTAAATGTTTTTTTGGAGAAATAAAAATGTCACAC
TATTTTTGACTAGCATCGACAACAATTCCAGATTGTTANACCCTTTTGGC
GCGCCATCCACTGCCACTTTTCTACCAGAAAAAGATAACAATTCCAGATT
GTTAAAAAATAAGCTTCAGAAAGTTAGGCTGTTTTGTAAGAAAGCGCAAG
ATTTTCTGTACCTTTAGAAGGGTTTTCCAAATTGAATGCAATTTTATGCC
AGTTATCCTGAAAAAACTTTTTCGCATAGTCCTCATCTTTGAGTTTTTTA
TTTTATTTTCAACTACATTGAGTATAAAATGTTGAGTTAAAAAGATTGTT
CAGTAATCACCTGAAGTCAAGAATGAAATTTTAATACCTTTTTACACTTT
ATTTTCACTACCAACCAATCAAAAAAGCCAATAGGAAAAGCTTTTTGAGT
ACTTTTCATATCATGTAGGGTAAGGGTCTGCAGAGAGCCAGATTTCCATT
TCCACCTAATGAAAAATAACTTTGGCGAGAAGGACCAACGTTTAGAATCA
CACTCAGAGATTAAAATCAACCAATCAAGTAAAGAAAATATCTTAAGGCT
CAAAGTAGTAATGAAAAACTTTACGTCAAAGGAACTTCTTGTTTCAGGGG
CAAAGCAACATTCCCATAGTGTAGCTTATGTACATGTTTTTTTATTTTTG
GATCACCCTATAGGTCCTATAAATTAAATTAAATTCTGTGGTTGACTTAT
CAGCTTTTCTGCCAATTAGGAATAGAGCCTGAATTTCAAAGGAAAATATG
GGCTATTTTTGTCAAAACCATCCAAAGATGTCTATTTTTTTGACTTCAAT
TGATGTCATACAATTGTTCTACTACCAAATGAAAAATATTTTTTGTTTGA
TTCAAAGGTTTTTGGACCATTTCTTCTCGGAATAGGAAGTAGCTTTTGTT
TATTGATAAAAAACGTATACCAGTCATTCATTTGAAAGGAAGGAAATTTT
AACTTCCATTCGTGGGAAATTATTTATAGGTCGTATTTTCTCTGATTTAT
CTATTTTAATGACTGTCAGTTTTTGGTTTATTCATAGATTAATTTGATTT
TGAAACAAATTAATGGATTTCTCTTAANTTTATTCATAGACTAATTTGAT
TTTGAAACAAATGAATGGATTTCTCTTAAGTTGATTGAGGCGTGATTTCT
ACCTTGTTTAAAGATCATTCTATTAGGCTTTTTTTGTTACTTAAAAGTTA
TTTTTGGATTGCTATCATTGTTTTAATTTATCGATTGACAAGATATAAAA
GCCTGTCTCTTTGAAATAATTTTAAGTAAATTCACTTACAATGATTATTT
TCTAAGATCAATGAACTTCAAGAGCAAAATCCTAAAGGAAGTTGAATTTT
TTGTCATCAATTTTTTCTCCATTTGCCAAATTCTTTTAAATTTTTCACTA
TTTGATGATATCCCAAGCTTGAATATCTTGTAAATGAGCACAAAACAGCT
TTTCTAAATCGAATTTGTTTAAAATTACAGCCTTTTCTGTTTACGCTAGA
TTATAATATTGGGAGAGAGGTTAGTTTATGTAATGTGGGCCTGGATTTTT
TTTACATCTTAACCCTATTATTAACAAGCTTTTTTGGGGATTTATATCAA
AGGGTGGGGTGTTTTCATCACCCTCCATAATTTTTGGTCTAGAGGTGCTA
TGGACTTGACTTATACGCTCTCTAGCATGATGATTGGAGCTCATAGTAAA
AAATGATTTTCTTTGATGACATCATCATAATCACGTGATAGAGTCTGTCA
TAAAAAGTTTTGCCTAACCATATTTTTGTTGGTTTTAAATAACCAAAAAA
GTTAACTTGTTACTGAAGAATCTTTCAAAAATGATGATGTCATTATTGAC
GACGTCATCATTTGAAAAAAGAATCAATGCCTAAAACCTGCCAAAATTTG
AAATTAAGCTAATTTTTTTCTGCTAAGCTTTCAGACTTACTTACAGGGTT
TTAGCTTGCTTTTACGACATGCTCATATTTACAGGGTTTTACTTAATATC
TACCTGTATCTACTGGTATACTGGATCTACTATAGTCGCAAAATCTGGTC
TACATGCGTTTTTAATGAGATTAAATTAAAGTTCAAAAAGGTTTCAGAAT
ACTTTAAAAAGTTTTCAGTGAAGAATGCCAGGCTGGTGAAAAATAATCTG
TTTTGTGTTCTTTAGAATAATTGTTACCGCCGATTATTTTTCAATAGAAA
CAAAACGACTTGGAATCTCCAGTGGTGTTGGTTACCAATAATGCAACCAC
TCGCCACACAACTAACCTTCGAACAGCAACAACAACAACGACAGCTGTAT
TACAATGACCACAATGTGGAAAATAACATCCCAGCCAAACCACCACCCGA
TAAACTATCATCAAACATCACCAGTCCTTCATCCACGTGTGCTTCTATTC
AGCTAGATTATCCTTTTAGTTATAATATCAATAATAACAACAATAACGCT
ACAAATAATACACTACCAGTCTCATCAGTAGATCACAGACAGTACTTATA
CGATTTAGCTATCAACGTTGATAATTATAAACCCTCATCTGTGCAAGCAA
CTTCATTATTTAATACTTTATCGAATGCCAAGAGGAGCATCAATTTGAAC
GAAACAACGCAAAATGGTTTACATAATAAACAAAGAACGACATGTAACAT
TGAGAGATCGATAAATTATAATGGTGATACTTTTAATGATAAAATTTTAC
CAAGGAATCATAATATTCGGAATAATAAAAGCCCATCTGATAGTGACATT
ACCAAAAATGGGGTTCCGAACGGCCATCATGGACCTTTAAGACCTCTATC
CTTAGATCTAACAGAAACGACACGTCAGATACTGCCGAGGCTATCACCGA
TTAGAGACTCAGACAATTTGAAGTCAGTTTTCAGTACGAAGCCCATGATA
TCGTCAAGTTTAAGTATGAATGGAAAGCAGCTTTCTTCTCTGCAAATGAG
GCACCATAAAATGATCTTGAACAATGACACGACTAATGAAATCCGACAAG
AGAGAGTAAGTGATTTTATTTTATGTTTCCATGTGCTCCGATTATGTCAA
TGCTTAGCCTTACCAAGCTCTTTTTC

Coding sequence (CDS) from alignment at scaffold_483:133775..143900-

>TCONS_00068374 ID=TCONS_00068374|Name=TCONS_00068374|organism=Clytia hemisphaerica|type=CDS|length=834bp|location=Sequence derived from alignment at scaffold_483:133775..143900- (Clytia hemisphaerica)
ATGCAACCACTCGCCACACAACTAACCTTCGAACAGCAACAACAACAACG
ACAGCTGTATTACAATGACCACAATGTGGAAAATAACATCCCAGCCAAAC
CACCACCCGATAAACTATCATCAAACATCACCAGTCCTTCATCCACGTGT
GCTTCTATTCAGCTAGATTATCCTTTTAGTTATAATATCAATAATAACAA
CAATAACGCTACAAATAATACACTACCAGTCTCATCAGTAGATCACAGAC
AGTACTTATACGATTTAGCTATCAACGTTGATAATTATAAACCCTCATCT
GTGCAAGCAACTTCATTATTTAATACTTTATCGAATGCCAAGAGGAGCAT
CAATTTGAACGAAACAACGCAAAATGGTTTACATAATAAACAAAGAACGA
CATGTAACATTGAGAGATCGATAAATTATAATGGTGATACTTTTAATGAT
AAAATTTTACCAAGGAATCATAATATTCGGAATAATAAAAGCCCATCTGA
TAGTGACATTACCAAAAATGGGGTTCCGAACGGCCATCATGGACCTTTAA
GACCTCTATCCTTAGATCTAACAGAAACGACACGTCAGATACTGCCGAGG
CTATCACCGATTAGAGACTCAGACAATTTGAAGTCAGTTTTCAGTACGAA
GCCCATGATATCGTCAAGTTTAAGTATGAATGGAAAGCAGCTTTCTTCTC
TGCAAATGAGGCACCATAAAATGATCTTGAACAATGACACGACTAATGAA
ATCCGACAAGAGAGAGTAAGTGATTTTATTTTATGTTTCCATGTGCTCCG
ATTATGTCAATGCTTAGCCTTACCAAGCTCTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042668XLOC_042668Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068374-proteinTCONS_00068374-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068374-exon-scaffold_483-1575043694:143755..143900TCONS_00068374-exon-scaffold_483-1575043694:143755..143900Clytia hemisphaericaexon
TCONS_00068374-exon-scaffold_483-1575043694:133775..134653TCONS_00068374-exon-scaffold_483-1575043694:133775..134653Clytia hemisphaericaexon
TCONS_00068374-exon-scaffold_483-1510915933:143755..143900TCONS_00068374-exon-scaffold_483-1510915933:143755..143900Clytia hemisphaericaexon
TCONS_00068374-exon-scaffold_483-1510915933:133775..134653TCONS_00068374-exon-scaffold_483-1510915933:133775..134653Clytia hemisphaericaexon
TCONS_00068374-exon-scaffold_483-1491911889:143755..143900TCONS_00068374-exon-scaffold_483-1491911889:143755..143900Clytia hemisphaericaexon
TCONS_00068374-exon-scaffold_483-1491911889:133775..134653TCONS_00068374-exon-scaffold_483-1491911889:133775..134653Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_483supercontigscaffold_483:133775..143900 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.06542	1.40246	1.51241	0.724206	0	0	0	0	0.416501	0.4992	0.721928	0.318514	1.38167	1.04026	0	1.44128	0.887519	1.12948	0	0.773961	0.907432	0.766844	0	0.519026	0	2.26634	1.19269	0.447062	0.751892	0.34245
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068374 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top