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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068339 ID=TCONS_00068339|Name=TCONS_00068339|organism=Clytia hemisphaerica|type=transcript|length=1218bp
GTGAGTGTTTATCGAGAATTTGTCGTTTTTCCGAGAATTTTACCGAGAAC
GACTTTCAACTTCGTTATTAACGTTATATTAACATAACCATTTATAAAAT
TGCATTTCAAAACTAAGTCTGAGATCACATTATGGAGATAACTTGTGTGG
GATACTGCCGCTGGCTGCCAGCTGTAATATGTCATAGTACTGGACATAAc
tcctattttcgcaactatagacgttttcaatgagcgccccgtcagcacct
tggactgactacccaattcccctaaCATGGCAtcggttgacccgggcgaa
ggttcattcacttgccaagtgaaccgctgcgagtgggaatcgaacctcag
tcgcctgtgcagtaaccaaggtcaatgaccactataccacagcgttattt
ttataagagattaaaacaaaataaaatcaccaattttgtttgtaatctct
tcttcattcttctgttattttctgaagatttggaaattatgattctaaaa
atttctttggctgagcctcatgcttagcatatgcttataatttttctgga
aatttgagcttcagtatggcTATAAACGttaaaatgcttataaaaaaaat
tagtgtATCAATGGTATTACACACAGTTACGGTACTTGTGTGCAGCATTG
AGTATACAGTCCAAATATCTCTTTGTttggaaaacattattttatgaaaa
caatcagaaacatgaaattgttgtttttatggGAAAATGGGGTTGTGCGA
GGCAGGCAGGGAAAAAACTATTGTTTGGAATGAATGCAATAAAACGAGCC
TCAACAAAGAATTCTTTGCAATCAGGTGTTTAAATAAGTGTAGTGAAAAC
TTGTCGAATGGAGGTTATACATTATGTTATGCATGACACTTTATCTATCC
CTAGGAAGGAGGATCACCCACCTGACTCCAGTTCCAGACACTATCAATCG
AACAAGTTCAAACCAAAATTAATCACAGTCAAACCAATTGgcaatcgaat
gtaatcgaacAAATAATTGCCAATTGATTGTCTCAACGCAATTCAATCAA
TTGCATtattgtgttcaattgattttttcgattcgttcgattgacaccct
CAAGGCCATGCCATATGGAAGAATAGGCCAGGAAACCATAAATGtgtcaa
aataaacaaatatttcCTCACCTTATGTtatattttagactttttcaTAG
CAGTTGTTTGTAAGGTAG Run BLAST on NCBI transcript from alignment at scaffold_482:563546..564763 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068339 ID=TCONS_00068339|Name=TCONS_00068339|organism=Clytia hemisphaerica|type=transcript|length=1218bp|location=Sequence derived from alignment at scaffold_482:563546..564763 (Clytia hemisphaerica)
CTACCTTACAAACAACTGCTAtgaaaaagtctaaaatataACATAAGGTG
AGgaaatatttgtttattttgacaCATTTATGGTTTCCTGGCCTATTCTT
CCATATGGCATGGCCTTGagggtgtcaatcgaacgaatcgaaaaaatcaa
ttgaacacaataATGCAATTGATTGAATTGCGTTGAGACAATCAATTGGC
AATTATTTgttcgattacattcgattgcCAATTGGTTTGACTGTGATTAA
TTTTGGTTTGAACTTGTTCGATTGATAGTGTCTGGAACTGGAGTCAGGTG
GGTGATCCTCCTTCCTAGGGATAGATAAAGTGTCATGCATAACATAATGT
ATAACCTCCATTCGACAAGTTTTCACTACACTTATTTAAACACCTGATTG
CAAAGAATTCTTTGTTGAGGCTCGTTTTATTGCATTCATTCCAAACAATA
GTTTTTTCCCTGCCTGCCTCGCACAACCCCATTTTCccataaaaacaaca
atttcatgtttctgattgttttcataaaataatgttttccaaACAAAGAG
ATATTTGGACTGTATACTCAATGCTGCACACAAGTACCGTAACTGTGTGT
AATACCATTGATacactaattttttttataagcattttaaCGTTTATAgc
catactgaagctcaaatttccagaaaaattataagcatatgctaagcatg
aggctcagccaaagaaatttttagaatcataatttccaaatcttcagaaa
ataacagaagaatgaagaagagattacaaacaaaattggtgattttattt
tgttttaatctcttataaaaataacgctgtggtatagtggtcattgacct
tggttactgcacaggcgactgaggttcgattcccactcgcagcggttcac
ttggcaagtgaatgaaccttcgcccgggtcaaccgaTGCCATGttagggg
aattgggtagtcagtccaaggtgctgacggggcgctcattgaaaacgtct
atagttgcgaaaataggagTTATGTCCAGTACTATGACATATTACAGCTG
GCAGCCAGCGGCAGTATCCCACACAAGTTATCTCCATAATGTGATCTCAG
ACTTAGTTTTGAAATGCAATTTTATAAATGGTTATGTTAATATAACGTTA
ATAACGAAGTTGAAAGTCGTTCTCGGTAAAATTCTCGGAAAAACGACAAA
TTCTCGATAAACACTCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068339-exon-scaffold_482-1491911889:563546..564763 | TCONS_00068339-exon-scaffold_482-1491911889:563546..564763 | Clytia hemisphaerica | exon |
| TCONS_00068339-exon-scaffold_482-1510915933:563546..564763 | TCONS_00068339-exon-scaffold_482-1510915933:563546..564763 | Clytia hemisphaerica | exon |
| TCONS_00068339-exon-scaffold_482-1575043694:563546..564763 | TCONS_00068339-exon-scaffold_482-1575043694:563546..564763 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_482 | supercontig | scaffold_482:563546..564763 . |
Blast
The following BLAST results are available for this feature:
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