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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068317 ID=TCONS_00068317|Name=TCONS_00068317|organism=Clytia hemisphaerica|type=transcript|length=541bp
gccctatttatataaagaaaaaatgacccAATGATTTTTTGGGCAAAGAA
AAATGCCAAAGGAAAATCTAAAGGGGtataaaatggcttaaatttgGCAT
AGGAAAGCAAAATCAGCACTCTCTCGAAGAACTCGCAAGACAAGCATTAT
TTCACTTAGGAGATTTACTCTtaaacaacaaaatgaagaTAACTTTGGCT
TTAGCTGTTCTTCTTGCTGTCTTCGCAGtcAACGAAGCCACGAAAAGTCC
AGCTATGAAAGATGAAATCGTTCCTCAAGAGCATTTCAACGTGAGAATGA
GGCGCAATGTATGTGAAAACAATATCGATCAAAGCCAATGCGAAGAAAAG
TTCCGGGAAAATAACTACTCATGTTTTGGAAATTCCATCGAGTTTTTTGA
GGAAAATTGCGCCAAATACtgtgaatttcaattttgcTATTGATTGGTTT
CTCTAtaagaatatatatttttgatttgataaatGTACGCAGAAACTTAT
TAATTAGAAAGAGATattaagattgaaaatttccctTCTAC Run BLAST on NCBI transcript from alignment at scaffold_482:498631..499688- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068317 ID=TCONS_00068317|Name=TCONS_00068317|organism=Clytia hemisphaerica|type=transcript|length=1058bp|location=Sequence derived from alignment at scaffold_482:498631..499688- (Clytia hemisphaerica)
GCCCTATTTATATAAAGAAAAAATGACCCAATGATTTTTTGGGCAAAGAA
AAATGCCAAAGGAAAATCTAAAGGGGTATAAAATGGCTTAAATTTGGCAT
AGGAAAGCAAAATCAGCACTCTCTCGAAGAACTCGCAAGACAAGCATTAT
TTCACTTAGGAGATTTACTCTTAAACAACAAAATGAAGATAACTTTGGCT
TTAGCTGTTCTTCTTGCTGTCTTCGCAGGTTTGTGATTAGTTCTTTGTTG
GTTTTCAATTTGGTGTTTTTAGTGACAGATAGCTATTAAGAACAGAAATA
ATCTCTGGGTTTGTTATTTTTGGAGTATATTGAGGGATTTCTTAAATACT
TTAAATTTGCTTGGGATACGAGTCTTGAAACCTCAATATATAGGTTGTTT
TTCTTTATTTTTCAGTCAACGAAGCCACGAAAAGTCCAGCTATGAAAGAT
GAAATCGTTCCTCAAGGTATAAACTCTATGTTCACCCTATTGACCTTTCA
CTACAATCTGAGCTCTGAGAATAACATTTTTTGAAAAAAGTGAAAACCTT
CAACCTTTTATTCGAAATCCAAAACATCAAACTGACATAAACGCTTGTAA
CGATTTGAGAGTTAGACGATGGTTTCAGTACTATTCGTACTGGTACGAAT
CAAACTCTTCAAAGAAATCATTCTGTTTATGCCTTTTAAATGAAGTGGTC
AGGAGTTAGTCTTGAACTCGGTATATTGGCTAATTTTGAGTGTGTATACA
CGTCATTCGGTTAAGGTTGGTTAAAACCTTTTTGTCTTTTCTTTAGAGCA
TTTCAACGTGAGAATGAGGCGCAATGTATGTGAAAACAATATCGATCAAA
GCCAATGCGAAGAAAAGTTCCGGGAAAATAACTACTCATGTTTTGGAAAT
TCCATCGAGTTTTTTGAGGAAAATTGCGCCAAATACTGTGAATTTCAATT
TTGCTATTGATTGGTTTCTCTATAAGAATATATATTTTTGATTTGATAAA
TGTACGCAGAAACTTATTAATTAGAAAGAGATATTAAGATTGAAAATTTC
CCTTCTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068317-exon-scaffold_482-1575043694:499461..499688 | TCONS_00068317-exon-scaffold_482-1575043694:499461..499688 | Clytia hemisphaerica | exon |
| TCONS_00068317-exon-scaffold_482-1575043694:499223..499273 | TCONS_00068317-exon-scaffold_482-1575043694:499223..499273 | Clytia hemisphaerica | exon |
| TCONS_00068317-exon-scaffold_482-1575043694:498631..498892 | TCONS_00068317-exon-scaffold_482-1575043694:498631..498892 | Clytia hemisphaerica | exon |
| TCONS_00068317-exon-scaffold_482-1510915933:499461..499688 | TCONS_00068317-exon-scaffold_482-1510915933:499461..499688 | Clytia hemisphaerica | exon |
| TCONS_00068317-exon-scaffold_482-1510915933:499223..499273 | TCONS_00068317-exon-scaffold_482-1510915933:499223..499273 | Clytia hemisphaerica | exon |
| TCONS_00068317-exon-scaffold_482-1510915933:498631..498892 | TCONS_00068317-exon-scaffold_482-1510915933:498631..498892 | Clytia hemisphaerica | exon |
| TCONS_00068317-exon-scaffold_482-1491911889:499461..499688 | TCONS_00068317-exon-scaffold_482-1491911889:499461..499688 | Clytia hemisphaerica | exon |
| TCONS_00068317-exon-scaffold_482-1491911889:499223..499273 | TCONS_00068317-exon-scaffold_482-1491911889:499223..499273 | Clytia hemisphaerica | exon |
| TCONS_00068317-exon-scaffold_482-1491911889:498631..498892 | TCONS_00068317-exon-scaffold_482-1491911889:498631..498892 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_482 | supercontig | scaffold_482:498631..499688 - |
Blast
The following BLAST results are available for this feature:
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