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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068287 ID=TCONS_00068287|Name=TCONS_00068287|organism=Clytia hemisphaerica|type=transcript|length=549bp
AATTGCTAAGCCCACTAGAAGACGTCTTGAAGCTTTCAGGTTGGTTGAAA
GATGTTCGTGGTGTGTATGAGAAGCTACTGGTAACTTTCGAAGGAACGCC
AGACAAGAATTGGTGGAGCAAAATCATTTCCAAAGTTCCATTTGGATCAG
GTAGTCAAAAGCAATATGAAGGTTGGATCGTACAGTTTCTAGAAGGTAAA
CCCAGTGTCCAAACATTATCAGCTATGCAAAGTTCCATAACAAGCGTACC
GATGAAAATAACGTACGACCAAAATTGTGAAGGAGAACAAAGTGCTCTTG
TTGCAGGACCAGTTGGATTTACAATCGAAGAAGGGAATAAAGATTCGAAA
AATGTTCCAACAATTCGACCGTACATTGGATGGGCTTTGTTGCTACCAAA
GAATTCAGGATTTAGATGAAACTAACTGAATTAATTAGCTTGACATTTTC
TGCGAATAAAACCCTCTTTTTCTGTTGACAATTCGTTCAAATTTATTCTT
TCTTCGCTTAACTGAGCCACAATGCCTCAATTACTTCAGAAAAGCCCAT Run BLAST on NCBI transcript from alignment at scaffold_482:164149..165713- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068287 ID=TCONS_00068287|Name=TCONS_00068287|organism=Clytia hemisphaerica|type=transcript|length=1565bp|location=Sequence derived from alignment at scaffold_482:164149..165713- (Clytia hemisphaerica)
AATTGCTAAGCCCACTAGAAGACGTCTTGAAGCTTTCAGGTTGGTTGAAA
GATGTTCGTGGTGTGTATGAGAAGCTACTGGTAACTTTCGAAGGAACGCC
AGACAAGAATTGGTGGAGCAAAATCATTTCCAAAGTTCCATTTGGATCAG
GTAGTCAAAAGCAATATGAAGGTTGGATCGTACAGTTTCTAGAAGGTAAG
ACAGAACAAAAGGAGGGAAGATAAGATGTATAGATCCCCTTTTGGGATTT
TGCTGGCCAGAGTATCAGGTGTGATACAAAAGCCTCTGTTTAACCTTGGT
TAATGGCTCTAATGTGATATATTAACCTTTATACATTTCATTTAAATGAG
GCAGNGGTTAATGGCTCTAATGTGATATATTAACTCTTATACATTTCATT
TAGATGAGGCACAGGATTTTATTTGTACATCTTTCTTTGCAGGTAAACCC
AGTGTCCAAACATTATCAGCTATGCAAAGTTCCATAACAAGCGTACCGAT
GAAAATAACGTACGACCAAAATTGTGAAGGAGAACAAAGTGCTCTTGTTG
CAGGTAAGTTTAGGAACAATGGCAGCCTAAATATGTATATCTGTAGAGTT
AAGTGAATTTTCGCCATGTTAAGTTGTATGATAACTGATGATGGCGCAAG
CCGAAAAGCTTTTTATCCAATTTTCAAATATATTTTATATTTCACAAATT
GTATCTGTAGACATTTTGATGTTTCTGGTTTAGCATTCCATTATAAGAAG
GCAGCACATGTATAATTTGAATCTACTAACCCCGGGTTTACAAGAATGGC
GAAGCTGTAAAAATACAACGTTCGAATTAACTCCAATAAATTTTTAGGTT
TTTCGTATATTAGTTCGTCAAAAGAGCAAATTACAGATTGGATATCCGGT
GTAGAGCAGTGGATATCAAAGTCTCACTCGATAAATTGCTGCTCGTAAAT
TTTGAAGCAAGATTTTCTCAGTATTAAATTACGTTATTTTGTTATTTTGA
CTGATTCTATTATTGTTTTAATCAGTTTTGGAATTTCGTGCAAACGAACT
TCGATCGAAAGACGGATCTTAAAAATAATTTCCGCGGAAACTGAGCTTAC
ATATCGGGCTAATGAAAAACTTGACAGAGTTTAACAAAAGATTTTTGTTA
ATATTATATTATTTAAATATTATCCAGTTTTCGATACAATAGGCCTCAGA
AAACCCTTTTTGCTACCAACTACCCAAAGAAGTAATTCTGGCCAATATGT
CCCTTAATCGCGGGATAAGTTGATGATAGAATTTTCTTGAAGAAAATATA
AAAAGTGTTAATCTATTTCCAGGACCAGTTGGATTTACAATCGAAGAAGG
GAATAAAGATTCGAAAAATGTTCCAACAATTCGACCGTACATTGGATGGG
CTTTGTTGCTACCAAAGAATTCAGGATTTAGATGAAACTAACTGAATTAA
TTAGCTTGACATTTTCTGCGAATAAAACCCTCTTTTTCTGTTGACAATTC
GTTCAAATTTATTCTTTCTTCGCTTAACTGAGCCACAATGCCTCAATTAC
TTCAGAAAAGCCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068287-exon-scaffold_482-1575043694:165519..165713 | TCONS_00068287-exon-scaffold_482-1575043694:165519..165713 | Clytia hemisphaerica | exon |
| TCONS_00068287-exon-scaffold_482-1575043694:165161..165271 | TCONS_00068287-exon-scaffold_482-1575043694:165161..165271 | Clytia hemisphaerica | exon |
| TCONS_00068287-exon-scaffold_482-1575043694:164149..164391 | TCONS_00068287-exon-scaffold_482-1575043694:164149..164391 | Clytia hemisphaerica | exon |
| TCONS_00068287-exon-scaffold_482-1510915933:165519..165713 | TCONS_00068287-exon-scaffold_482-1510915933:165519..165713 | Clytia hemisphaerica | exon |
| TCONS_00068287-exon-scaffold_482-1510915933:165161..165271 | TCONS_00068287-exon-scaffold_482-1510915933:165161..165271 | Clytia hemisphaerica | exon |
| TCONS_00068287-exon-scaffold_482-1510915933:164149..164391 | TCONS_00068287-exon-scaffold_482-1510915933:164149..164391 | Clytia hemisphaerica | exon |
| TCONS_00068287-exon-scaffold_482-1491911889:165519..165713 | TCONS_00068287-exon-scaffold_482-1491911889:165519..165713 | Clytia hemisphaerica | exon |
| TCONS_00068287-exon-scaffold_482-1491911889:165161..165271 | TCONS_00068287-exon-scaffold_482-1491911889:165161..165271 | Clytia hemisphaerica | exon |
| TCONS_00068287-exon-scaffold_482-1491911889:164149..164391 | TCONS_00068287-exon-scaffold_482-1491911889:164149..164391 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_482 | supercontig | scaffold_482:164149..165713 - |
Blast
The following BLAST results are available for this feature:
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