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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068206 ID=TCONS_00068206|Name=TCONS_00068206|organism=Clytia hemisphaerica|type=transcript|length=2571bp
AAATTCTGAAGTTGGGTTTAACAAGCTGGTTGTGTCGATTTTACAATGTC
GATTTCATGAAATTGAGTTATGAATCAAAAGAGTTGTCAATGGTTTATTC
TTCTACTGCACGAAGTTGTTTAGAATTGTTGGAAAGAGGCTTCACATTGG
ATGGTGTGTATAAAATACTGACCGTTGGAGAAGAAAAGGAAGTCTACTGT
GATATGACTGGTGGCGGTTGGACAATGATTCAACACCGATTAAACGGTGA
CATTGATTTCAATCGAAGTTGGCAATCATACAAAGAAGGCTTTGGCGATG
TCAATGGTGATTTTTGGATTGGTTTGGAAACCATTCGAGAAATGAGTGTG
TTGTTGAACAACTCTTTGATTCGAATTCAAGGTGAAAGTTTTAACGGAGA
TCGAAGATTTATCATTGCAAAGGGATTCTGCATCGAAGACGAACAAAAGA
AATACAAATTGCATTCTGGGACAATGATCAATGATGAATGGAATATCGGA
GGTGATTGGACATATCATGATGGTTTAAAGTTCACAACACGGGATGACGA
TAACGATTCAAAGGAGCATAACTGCGCTGATGAACACAGTAGTGGCTGGT
GGTATAAAGGTTGTTATGCAATAAATGCTAATAAAGCACCAGCAAAACAA
CAGCAAACAACATATGCAGGTGGTATGAGCTGGCCCGCCTGGCTGGGCAG
TCACTCTCAATCATTGAAAGCAATGAATATGGCAATAAAGAAAATGACCT
AATCAAAAGCCTCCTTTTTAATAACAACAATTTAATTAGATTAATTTGAC
CGAAATTTAATCAATGAGCCTCatttaatcaaaaaaaatacgtaagtaat
agttatcgcacaGTACCGAATACAATATGGGATATGTTTTTCTCGTTTAG
AGTTTTCTATAATTAccttagcgagcacctcactaaaaaccgggattttc
tatttcgttaattgcgtaaaaaaacgcgggtgacgtttAGTATAGGCTAT
AATTACCTCGCCTATATCTAATATTGTACCGGTTAAAGTATGATGTCTGG
TTTATCGTCGACTTGAAAAATAGCtatctttttctctattttgtttttct
cttcttggttttctctctctctattttgataaaatctacATCAACACATT
CGAAAAAAACATTTCTGATAAGTTGTTGTGTATTGCAAgcgaaaagaaaa
tttctaaccataaaattgtaaaatctaCGATAtctcgcttaccagacccc
GTTTTTGAACCCAGCCTTGTAATTTTATATAGGATATGCCCCctgtcata
attgtcacaattgagtgcattttcaagcaatctagagctcaaattttcaa
aattcccccctcgggccaatcCGGTTGGCCCTCGcagtgtcactaaactt
cagccccaaTATGGAAAtacttcctacggcactgcttTGAGTGAAAAGAT
ATCGTAATAAAAAAGTAATACCCTGTTTCAAAGTTgattgtacacgcttt
tttttttataagaatacactttataagaatgtccatgatgaaaatggcca
aaaaattaagaatatgctaagaatatcaccatcatggaattttgagacgt
atgtactaaatgttaagtctagtctgaattaggatcctaacctaagaata
ctgtaaggatatttcaggatgattttcccaaaaaagttaagaatatccat
gatgaaatggatttacaccattcttataaaaaaaaaagcgtgtaagggGC
TTATTACAAGccttttaaaatgcttttaaaaatccgcaaagaaattgaaa
aaatgaaaacgaaatACAGAAGAattgatcaaaaatttccaaattaaacT
TCCCTGAGAGTGGGACCTTAACAGATTTCAAATAATCTATTCAGAATTTG
CTAAATCTTGGTTAAATATTCGGGCGATAGGTCCAGTtcaaacattttaa
gcctaattttcAGAGAAAACTTGAGAAACGGAATTCTTTCGCGACAGACT
TCAAGAAAATACTGGTTTtaaagtttctttctttttattatataagttca
ttagttttttagttttatcagattatttaaaaaaacggAGCGATACCGAT
CAAAGATATAAAGAAAATATGTAGCTAAAAAAGATGACATAATGGTCTCT
AAAAACCTGTATTTCaacttaaaattttcacatAATTTATATAGCACAAA
CGTAAAGCTTACACTAGAGCCCATCCATATTTCATTGGGCAAACACCTTT
GTAGTTAGTAACAAATATTGTTAACACGTTATTGTTATTCTGTAACTGTA
AGCATACTCTTTTTATTgtaaaagaaatttataaaaagagGATAATGGCT
TACATTAGCGCAAACAACAAAGAGCAGTCTGAAGATAATACAGAATaatg
ttcgaactcgatacttttttccggacacccggTCATTTGCCCTTAAGGGT
GTTTATTTCAGCTAATGGATTTCTTTTGCTGTTGTTCAAAataatctgca
taattagcgggATTCGGATTTCCTAGCAATTCCaatgatataaccgcatc
acgACCGCATCGTTAGATAAA Run BLAST on NCBI transcript from alignment at scaffold_480:33594..44599+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068206 ID=TCONS_00068206|Name=TCONS_00068206|organism=Clytia hemisphaerica|type=transcript|length=11006bp|location=Sequence derived from alignment at scaffold_480:33594..44599+ (Clytia hemisphaerica)
AAATTCTGAAGTTGGGTTTAACAAGCTGGTTGTGTCGATTTTACAATGTC
GATTTCATGAAATTGAGTTATGAATCAAAAGAGTTGTCAATGGTTTATTC
TTCTACTGCACGAAGTTGTTTAGAATTGTTGGAAAGAGGCTTCACATTGG
ATGGTGTGTATAAAATACTGACCGTTGGAGAAGAAAAGGAAGTCTACTGT
GATATGACTGGTAAATAAAGTTCTATTCCATTTATCtgacaaatttttgc
caaattagCCTAGGCCGAAATTTAACATTGATCTGAACATTAGATCGCTA
AACGTTAATTACACTCGAAAAGAtgtaaaaaagaagagaaaagagagaaa
aagagtGGACAAGCAAAGGGAGAAACTAAATTTGCTTGATGTAGATGGGg
ctttaatttcaaaacaaaggccgAACGAAGTCCAAACCAGGCTCTATCAA
ctcaaagtcatcttttaaaaagaacaaaaacatagCAAAAACAAAAGTAA
CACACAAAAAGACATAGACAAGCTAGACAAGCAAGCCAGATCAATATTCA
CGCGGTCCAAATTGCGTCAgaacaaaaacacaaaatttcctAGAAGGAAC
CTTGCtccttcaaagaaaaaatgaccgAGGGACTTTTTACTAATACAGCG
AGCTTGTGTGTTTTAGGAAGAGGGTGGACAACGATTCAACGCCGATTAAA
CGGTGACATTGATTTCAATCGAGGTTGGCAATCACACAAAGAAGGGTTTG
GCGATGTTAATGGTGATTTATGGATTGGTTTGGAAACCATTCGAGAAATG
AGTGCGTTGTTGAACAACACTTTGATTCGAATTCAAGGAGAAAGTTTTAA
CGGAGATCGAAGATTTATCATTGCAAAGGTAAAATTATACACATATTAAC
CATTAGCGTAGTAGGTTTTACAGGAGACTGTTAACGAATATaagagaaaa
attcttttcaacaAAGGTATCAAAAAGAAGAATTGTATAGGAGCACACTC
TTGTGAAAGGGAAATACCTCATATGAAAAAGAGTTTTTTCGGGAATTTgc
ttggtttgtttttttgtaaggCAGCCTTAAAATACTGTGCACTGAGAAGA
GACTTTCCGCGTAAATTCATCACCAGTCCCCTCAAAAGTCAACAGCGCCG
TTAAGAGTTGAACAGTGCATACGGTATAATATTTGAAGTTTTTGCTTTAG
GTTATTATGAGTAGAATACTTACTTACatcaagcaaaaaatgtcaGTTTA
TCAAACTTCAGAGTGTTAAATTTTTTTCGAGACACATTCCTTTGAAACTT
TTTGTAACCGGGAGCCTAATTAACTTCAAACGAATTATACCATCTTTTCC
CGTTTAATGAATAGGGATTCTACATCGAAGACGAACAAAAGAAATACAAA
TTGCATTCTGGGACAATGATCAATGATGAATGGAATATCGGACGTGATTG
GACATATCAAGATGGTGAAATGTTCACAACACGAGATGATGATAATGATA
AAAAAGGTGGTGGTAATTGTGCACAAGAATTTGCTTGTGCTTTGTGGTAT
AGGAGCTGTTTCGCAATGAATCCTAACAGAGCACCAgcaaaacaacaaga
aacaacATTTGCAGGCGGTATCAGCTGGCCCGCCTGGTTAGGCGATCACT
TCCAATCATTGAAAACCATAAATATGGCAATAAAGAAAATGACCTAAACA
AAAGGTTCCTTTTTTAATAACAACAATTTATTTACGAATAATTTGACCGA
AATTTAATCAATGAGCctcatttattcaaaaaaataataatcggACGGTA
CCGAATAAATAGGGGATATGTTTTTTCTCGTTtagagttttctatatttt
cctcgcctataTGTAATATTGTACCGGTAAAAGTATGATGTCTGAtttat
cgtcaacttgaaaaatatctacaaaaacattttctcccTCCATTTGTGTC
TTTTCTATGTGTTGCTTTTCTcttcttgtttttttctctctctacTTTGA
TAAAATCAACATCAAcacattcgaaaaaaataatcaaacgaCCGTTGAAA
AGGCAAAAACATTTCTGATAGGTTGTTGCTGTGTATATCTAAGCATAAAA
TCGTAAAACCTATGATAtctcgcttaccagaccccttttttgAACGCAGC
CTCTTGTAGTTTTACGGTACAATACGATTaacagcatttatgtacgccTT
TTTGGCCAAttagattgctcatattttttttcatgttgACAATAAGtctg
tttaaaaaaataattggaAGTTTTCTACATTTTGAAATAATGCTTTTGAG
TGAAAAAGATATCGTTAAAAAGGTAATACTCTGTTTGAAAGTTGATTGTA
AGGGGCTTATTTCAAGCCTATAGAACCTTTTAAAAAatccgagaaaaaaa
atttgaaaaaatgaaaacaaaaaaaagaagacttgatcaaaaattttaaa
attaaaatttttattaatttaagtTCATTAGTTTATTTAGTTTTATCTAA
ACTGCAAAGAACACAATAAACCCTATAAGTACCATCACTTAGTGACTTCA
AATTATCCATTTTATTTAGATTTCACATGCACGTTCGCACCCTAAATAAC
AATAAAATGGCAATCTGGACAGTTTTTCATTCGAACGTGGTTTCCTTCGG
ACCTagatcgaaggatgatgatggtTAAAAAAACGGGACGATACCGATCA
AAGATGTAAAGAAATTATGTAGCTGAAGAAGTGCCATAATGGTCTCTAAA
AGGCTGTATTTCAACCTGTAATTTTCACATAATATATATAGCACAAACGT
AAAGCTTACACTAGAGCCCATCTATATTTCATTGGGCAAACACCTTTGTA
GTTAATAACAAATATTATTCTGTAACTGTAAGCATACTCTTTTTATCGTA
AAAGAAATttataacaagcaacatgctgaatggacctacctgatgatgaa
acttagatagcaataaggagaaaaacaatcattaagaaaatatagcggtt
agcgaaaatccattaaatttcatcattgattgttgatgggggaggGGTTT
AGGGGAAAAGTAATAGATAGTTCCggttgaaaaattggaaaagttttatt
gacaattgaatcatgcttgatggtggcattgttatcaataattttttaag
tgaaaaaaacaaagaaatatatggaaaaagcccagttcaaatctgcaaaa
acggcgatttccggcatacttccggcattttcggccggaaaaacatgatt
ctcaaaaatccgTATCGGCCATACATAGGGCATTGCTGATACACATTGTG
CAAAAATCCGGAAAAAcgattaatgaaatctcgacaaaatggcaacaaac
cagttttgacggcatattatcggcatttttggccgaaatttattttcttc
aaaaatcaggctccgtcacattttaggtattgccattttgcatcaatgtg
caaaatttcatgaacaaatataaaatacagctcgagaaattcaagaataa
ccgtttttccggcgatattcggctgttccggcgatttttagaaagtcccg
aaactcagttttattgacaattgaaccatacttgatggttggcattgtta
tcaataatgattttgcgtgaaaaaacaaagaaatatcaggaaaaagtcca
atgaaaatctgcaaaaacggcgatttccgttatatttctggcattttcgg
ccagaaaagaatttttctcaaaaatcgaactcggccatgttttgggcatt
gctattacgcatctttgtgcaaaagaaaacagaaaaaactaatgatgaaa
tctcgagaaaatgccaaaaaaacggtttttccggcattttgggccggaaa
aaatgtctttcgaaaatcgggctccgtcacattttaggtattgtcatttt
gcatcagtgtgcaaaatttcataaaaaaatataaagtacagcttgaATTT
TCAAGAAATGCTGTCTTtacggcgaaaataggttgttccggcgattttta
aatagttccggcttcaaaaatcaattttattgaaaattaaaacatgcttg
atggtgggcattgctattaataatgtttttgaatgaaaaaacaaccaatt
ataaggaaaaagtccaatgaaaatccagaaaaacggcgatttttttctca
ataatcggactcggccatgttttgggcattgttattatgcatctttgagc
aaaaaatcagaaagaactaatgataaaatctcgagaaaatgccaaaaaaa
gttcgaaaatcgaactccgtcacatttttggcattgccattttgcatcat
tgtgccaaaaattagaaaaaactaatgagccaatcctgggaaaggctggt
aacagacggacgaacggacgaacggacggacatcggttaatttataggac
ctccaaggtaggtccaaaaagagcaTAATGGCTTATATTAGCATAAACAA
CAAAGAGCAGTCCGAAGATTGAAGCCTTTTACTAATTCCCCGCCACTAGG
TTgaatcgggaagattcttccgaattGAAAAGAAACATCCCCAACGAGAA
GAATGAGCTCGAATTGTTAAGGATTTCATCCTTATCAGGAAGTCGAAAAT
TGACTCAATCTCACGCGAGAGGGAGTGTAAGCTCCGGACCACTATACAGA
GCTctaagaaaaattgaagaaagaaaaacgaataaaaacgaaaaagaacG
ACGAATAACGACAAAGAACGACAATAAAgaacaaaacaacaaattttcaa
aaaatttaatactttttagaataatttgcttaaaatataatttgaaattt
ggccCTTTATCGTTATTGTTTGTCGTTAATCGTAATATAAGTGCGAGTTT
GTTGATCAAAAACTTTGGTATTAGAAAGCAATGTAAAGAAATGTAAAGAC
ataatttattcattcatttagTGATtccctagactggagtcgtttataat
gtgtGTAATACTAATattaccaatactaataataataataatacgggatt
tagtttgtataaacgactggaagaatccggtgttccagccttatagatac
aggggctagctacgcagaaacttgcgtagcgagaaaacatgTTATCAAGC
agcaacaaactctcaaaacgaaatcaactcaaatgaaaaactttcaatac
acaaatccacacattttttttctcaagaattattttgagcaggaaaaaat
tataattacaatattgacacttttcttttgtttggagttagtgcacaaag
gtttctagacgactaaaattgtcccattcattactttttgctttatttct
actatgtataaacactattagtcgtctagcttgctagactagtgaTTCCC
TTATCATTGTTGAAAACAAGAAAGACGgtctttgaaaaaaagaaaataca
gtGGACTCCCTCTTATTGGAGCTTCGATTATTCGGCTcgttctttaattc
gaactaattcccAGTCCCCGtcgtagggggaattttgttcgattttttga
aatcgctcgattgttttgttagaagcacttgttataagataaataaaaaa
taataaataaaacaagctaaaattttcattaatttttgcccccataattt
ttgcctgagaccgtcatatttgtccgaaaatcacaccaaagtgtccgaaa
gaaaattggaaacatcgtaatttcgatttcTCTTAGGTTGAAGTTtccga
aaatgtataacaagtgcttctaacaaaacaatcgagcgattttacaaatt
gcCCCCTACTATAGGAGAAACCCtcttgaaatactttctatgattcggat
ctctctgtaattcgaacaaataagattccccgtcGAGTTAGAATAAGCGG
GAATCAGCTCTTATTGGTTCTTGTTTACCAGGCGGGATTTTTTTTTGTCA
GAAACACGATAAATAAAATTGGGCAACGGTTTGATAAAGTCGCAATCCCC
TGAAGCTTTCTCTCATAGAAAAGAAGACACTCGTTTAAGGAGGTGTGTCG
CCAAATAAGTAATATTTATCACACGATACAGGGTACAATAGgctatattt
ttcgagttcagattttttgttatattttccgagcctttaggcgagaccaa
tttaatttgttgttctacgggcagatcttTAGAAAAacatgggtcggtcg
gtcggtaaaataagaataaatttttcctttatcagggttggtcccgaaaa
tgttttcaaaaaaatatctggatcaaaaattcactttttttttatcttcg
atgaagatgaagattatGATAAAATTCtggtgtatggaatgcttgatttt
ctaaatttttcaatttcttgaattaattttcagttcattcaaatttaatt
cttgcaaataactagtgtgtaaaatatatcgtagtgaaaattcaatatta
ttgttttttattttattttagcaaaaatggggtcggtcgggcccgtagaa
caacaaattaaattggtctcgcctagcTTATGAATTTTTAGGCGAGGCAA
ATACAGAAAATTCTGAACGATAAAAATATAACCGATATATTGTACGAGTA
ATAAAAGTGTGATGACTGGTTTACCGTCAACTTGTAAGATATCAACAAAC
TTCTCACTCTCCATTgtgtctttttctatgtttccTTTTTTCTCTTGCTG
TTATTCTCTCTCTCCTCTATTTTGCTgaatgaaatcaacatcaagacatt
cgaaaaaaatcgaacggtcattaagaagataaaaaatattttcataactC
TTTATATAATCTGTTGTGTATTATGAATGAAAAGGAAAACATTTCTTAGC
ATAAAAGTGGACAAATTATACGCTTATGATGAAGGCGGCCTTGTAATTAT
GTATGTATGGTACAAAATGAAgtacagcatttatgtacgcgtttttagcc
aatcagattgctcatatttcaagttgataataattttttaaattgtttga
cATCTTTAATTATAAACAGCAgtttaaattaaaagaaagagactttgatt
tattatttaTAACTTTAAGTTTCTCAAGGTCGCCATCAACGttattaatt
taaaaaaatgttgaattgagagtgttaaattttcaatcaaaacttATGAC
ACATTACAAAATAGACTCATGAATCATAGTattgtgaattttgaaatttg
aatcagattacaaatccaaataaaatttttttcctcaaTCTTTAAATcgc
aaaaaaaaagtaaacgcAGAACGTAAGAAGAAAGTAAGTAATGTTCTCTG
CAAGAATACAAATGGACATGTATAAAATCTTAATTTGTACCTTAATGATT
TCCCTTATCATTAATGGCACTCTTGCGCAAGAAATGCAACTTAACTCTCA
TTTTCGcctggaaaaagaaaattacacCATTAAAAATGGCTCTCATATAC
CATCAGAAGAATTTGTTATCAAAGGCTCGGAAATTGAATGCTTGTTAAAA
TGTCAACTCAATTATTTGGTGTGCTTCACTCTTCAAATTCTGAAGTTGGG
TTCAGCAAGCTGGTTGTGTCGATTTTACGACGTCGATTTCATGAAATTGA
GTTATGAATCAAAAGAGGGGTCAATGGTTTATTCTACTACTGCACGAAGT
TGTTTAGAATGGTTGGAAAGAGGCTTCACATTGGATGGTGTGTATAAAAT
ACTGCCCGTTGGAGAAGAAAAGGAAGTCTACTGTGATATGACTGGTAAAT
AAAGTTCCCATTAATTTTCTAGACTACACTATACAGAGCTTTTCATTGAC
TGAACAATTGAATAGCAAAGTGAGACTAAACCAAATACTGAAGgcgtatt
ttcaaatttctcatggCAATCAGAAGTGATGCCTCAAAATTTGCGTCGCA
TTTTGGATGATGGATCGAGTTTAGCACTTCGTCGCATTTTACTTTATTCG
AATTCTGGAGGTAAAAGTTAgtttcaatccagcgtttgtaTGAAAACTAT
GCATGTCGCGGAACTAAAGTAGGAGGGAGAAATGAGTTGCTTGAAGAAtt
acataccttatcgggggaaaaaatgtcgggggaaggtgacgaaattagtg
ctttaaacgtcgaattacaagatcttttttcgagctagtgaaggagaCCA
TTTCGGTAGGACAATTTAGTTgagtgaaagtgactaaattgtaaatttcg
tcggggaaaagtaacgaaaatgcctctaggtgacgaaatttttccccgac
gaaaaataaaacccgactaaataaaactccgacattttgtTCCGCGATAA
GGTAGTAGATTCGCCTATAGCCTTCGACCTTGTTGAGCTATACCAACTAA
TCAGTCGACTAAGGAAACAGAGTTTTCAATAAGAGCCCATTGTTCCTTTA
ACAATAGCAGATCTGGCATGCAATGAACCGCAAATCAAAGACAAGCAGAC
TCTTATTCTCAAGATTTCGTATCGTTATAACCTGTTCGCTTGTGTGTTTT
AGGTGGCGGTTGGACAATGATTCAACACCGATTAAACGGTGACATTGATT
TCAATCGAAGTTGGCAATCATACAAAGAAGGCTTTGGCGATGTCAATGGT
GATTTTTGGATTGGTTTGGAAACCATTCGAGAAATGAGTGTGTTGTTGAA
CAACTCTTTGATTCGAATTCAAGGTGAAAGTTTTAACGGAGATCGAAGAT
TTATCATTGCAAAGGTAAAATAATTGGTTATTTGCATTCTTACTTATTCT
GGCGTTTTATTTCTAAGTATTCGACTGATTCTTAACGTTTAAAATGTCAT
CAGAAGTATTTCNATTCTTACTTATTCTGGCGTTTTATTTCTAAGTATTC
GACTGATTCTTAACGTTTAAAATGTCATCAGAAAGATTTTTTCCGTTTAA
TGAATAGGGATTCTGCATCGAAGACGAACAAAAGAAATACAAATTGCATT
CTGGGACAATGATCAATGATGAATGGAATATCGGAGGTGATTGGACATAT
CATGATGGTTTAAAGTTCACAACACGGGATGACGATAACGATTCAAAGGA
GCATAACTGCGCTGATGAACACAGTAGTGGCTGGTGGTATAAAGGTTGTT
ATGCAATAAATGCTAATAAAGCACCAGCAAAACAACAGCAAACAACATAT
GCAGGTGGTATGAGCTGGCCCGCCTGGCTGGGCAGTCACTCTCAATCATT
GAAAGCAATGAATATGGCAATAAAGAAAATGACCTAATCAAAAGCCTCCT
TTTTAATAACAACAATTTAATTAGATTAATTTGACCGAAATTTAATCAAT
GAGCCTCatttaatcaaaaaaaatacgtaagtaatagttatcgcacaGTA
CCGAATACAATATGGGATATGTTTTTCTCGTTTAGAGTTTTCTATAATTA
ccttagcgagcacctcactaaaaaccgggattttctatttcgttaattgc
gtaaaaaaacgcgggtgacgtttAGTATAGGCTATAATTACCTCGCCTAT
ATCTAATATTGTACCGGTTAAAGTATGATGTCTGGTTTATCGTCGACTTG
AAAAATAGCtatctttttctctattttgtttttctcttcttggttttctc
tctctctattttgataaaatctacATCAACACATTCGAAAAAAACATTTC
TGATAAGTTGTTGTGTATTGCAAgcgaaaagaaaatttctaaccataaaa
ttgtaaaatctaCGATAtctcgcttaccagaccccGTTTTTGAACCCAGC
CTTGTAATTTTATATAGGATATGCCCCctgtcataattgtcacaattgag
tgcattttcaagcaatctagagctcaaattttcaaaattcccccctcggg
ccaatcCGGTTGGCCCTCGcagtgtcactaaacttcagccccaaTATGGA
AAtacttcctacggcactgcttTGAGTGAAAAGATATCGTAATAAAAAAG
TAATACCCTGTTTCAAAGTTgattgtacacgcttttttttttataagaat
acactttataagaatgtccatgatgaaaatggccaaaaaattaagaatat
gctaagaatatcaccatcatggaattttgagacgtatgtactaaatgtta
agtctagtctgaattaggatcctaacctaagaatactgtaaggatatttc
aggatgattttcccaaaaaagttaagaatatccatgatgaaatggattta
caccattcttataaaaaaaaaagcgtgtaagggGCTTATTACAAGccttt
taaaatgcttttaaaaatccgcaaagaaattgaaaaaatgaaaacgaaat
ACAGAAGAattgatcaaaaatttccaaattaaacTTCCCTGAGAGTGGGA
CCTTAACAGATTTCAAATAATCTATTCAGAATTTGCTAAATCTTGGTTAA
ATATTCGGGCGATAGGTCCAGTtcaaacattttaagcctaattttcAGAG
AAAACTTGAGAAACGGAATTCTTTCGCGACAGACTTCAAGAAAATACTGG
TTTtaaagtttctttctttttattatataagttcattagttttttagttt
tatcagattatttaaaaaaacggAGCGATACCGATCAAAGATATAAAGAA
AATATGTAGCTAAAAAAGATGACATAATGGTCTCTAAAAACCTGTATTTC
aacttaaaattttcacatAATTTATATAGCACAAACGTAAAGCTTACACT
AGAGCCCATCCATATTTCATTGGGCAAACACCTTTGTAGTTAGTAACAAA
TATTGTTAACACGTTATTGTTATTCTGTAACTGTAAGCATACTCTTTTTA
TTgtaaaagaaatttataaaaagagGATAATGGCTTACATTAGCGCAAAC
AACAAAGAGCAGTCTGAAGATAATACAGAATaatgttcgaactcgatact
tttttccggacacccggTCATTTGCCCTTAAGGGTGTTTATTTCAGCTAA
TGGATTTCTTTTGCTGTTGTTCAAAataatctgcataattagcgggATTC
GGATTTCCTAGCAATTCCaatgatataaccgcatcacgACCGCATCGTTA
GATAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068206-exon-scaffold_480-1491911889:33594..33803 | TCONS_00068206-exon-scaffold_480-1491911889:33594..33803 | Clytia hemisphaerica | exon |
| TCONS_00068206-exon-scaffold_480-1510915933:33594..33803 | TCONS_00068206-exon-scaffold_480-1510915933:33594..33803 | Clytia hemisphaerica | exon |
| TCONS_00068206-exon-scaffold_480-1575043694:33594..33803 | TCONS_00068206-exon-scaffold_480-1575043694:33594..33803 | Clytia hemisphaerica | exon |
| TCONS_00068206-exon-scaffold_480-1491911889:42046..42257 | TCONS_00068206-exon-scaffold_480-1491911889:42046..42257 | Clytia hemisphaerica | exon |
| TCONS_00068206-exon-scaffold_480-1510915933:42046..42257 | TCONS_00068206-exon-scaffold_480-1510915933:42046..42257 | Clytia hemisphaerica | exon |
| TCONS_00068206-exon-scaffold_480-1575043694:42046..42257 | TCONS_00068206-exon-scaffold_480-1575043694:42046..42257 | Clytia hemisphaerica | exon |
| TCONS_00068206-exon-scaffold_480-1491911889:42451..44599 | TCONS_00068206-exon-scaffold_480-1491911889:42451..44599 | Clytia hemisphaerica | exon |
| TCONS_00068206-exon-scaffold_480-1510915933:42451..44599 | TCONS_00068206-exon-scaffold_480-1510915933:42451..44599 | Clytia hemisphaerica | exon |
| TCONS_00068206-exon-scaffold_480-1575043694:42451..44599 | TCONS_00068206-exon-scaffold_480-1575043694:42451..44599 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_480 | supercontig | scaffold_480:33594..44599 + |
Blast
BLAST of TCONS_00068206 vs. Swiss-Prot (Human)
Match: FCN1 (Ficolin-1 OS=Homo sapiens GN=FCN1 PE=1 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 3.621e-34 Identity = 79/222 (35.59%), Postives = 118/222 (53.15%), Query Frame = 3
Query: 87 SMVYSSTARSCLELLERGFTLDGVYKI-LTVGEEKEVYCDMT--GGGWTMIQHRLNGDIDFNRSWQSYKEGFGDVNGDFWIGLETIREMSVLLNNSLIRIQGESFNGDRRFIIAKGFCIEDEQKKYKLHSGTMINDEWNIGGDWTYHDGLKFTTRDDDNDSKEHNCADEHSSGWWYKGCYAINANKAPAKQQQTTYAGGMSWPAWLGSHSQSLKAMNMAIKK 743
S ++ R+C +LL+RG+ L G + I L V CDM GGGWT+ Q R++G +DF R W +YK+GFG G+FW+G + I ++ +S +R+ F G+ +F K F + DE +KYKL G + + G T H+ F+T+D DND NCA++ WWY C+A N N +YA G++W A G + S K M ++
Sbjct: 108 SQSCATGPRNCKDLLDRGYFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRMDGSVDFYRDWAAYKQGFGSQLGEFWLGNDNIHALTA-QGSSELRVDLVDFEGNHQFAKYKSFKVADEAEKYKLVLGAFVGG--SAGNSLTGHNNNFFSTKDQDNDVSSSNCAEKFQGAWWYADCHASNLNGLYLMGPHESYANGINWSAAKG-YKYSYKVSEMKVRP 325
The following BLAST results are available for this feature:
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