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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068196 ID=TCONS_00068196|Name=TCONS_00068196|organism=Clytia hemisphaerica|type=transcript|length=1302bp
TAGTATTTGTGGACTGATGTAAAAATCAATAATGCATATAATATAAGAGA
TCTTAAAAAAGGCAGAAAGATTGATTCCCAATTGATCTTTATTCATTAAA
ACATTTATTAATATGAAgcactttcaaaaaatcaagatttcaaTCAGAGG
CAACATTGTGAGGccgaacaaaatgttttaaaaaaggtGTTTTTAATAGG
ATAAAATTTTGGACAAAGGTTTTTAAATCGTTAAAAATTTAAGGACCACC
CaaacaaagttttgtaaaatttaaACGACGACTCCACagcagaaatataa
ttttagctCCCAATGTGCATTCAAAAATCCAAAgatctcaaattgatcat
ttctcatgtttgtataacgttaagtctaaaaaagtaagaatacgttaaga
atatttcaccctgtttcaccctcaattttcgcaatttcttaagaatactt
gaccttcatccaaagtacactattcttataaaaaaaagcatgtactctca
gaaaattaaaagaaacatGGGTTTCTAAAAACTTAATTGTAGCTCCATAT
ATGTTTACTCTAAATGTCACATTTTTTACTTGCCCGCAAACCGTCATTAT
GGGTTTTATTTTCCGGACCCAAAATTTTGGGATCTGAGCTTTTGGCCATT
GTTTACCAAATATCCGTCTTCTGTAACTTTTGTCTAGCGACCGAGCAGCC
ATGGAAGCCTTTGCAGCACTAGAGGAATATTtcaaagttaagaaaaacat
tcCCTATGAATGCTCATTTTTTGGAAATGCCAGACAAAATGCCAGTGAAA
GCATTGAACAAGTTGTTACTCGACTACCTAAACTTTCAACTAGCTGTGAA
TATGGTGACAAACAAAGTGAACATATCAGAGATCAAGTCATCCGAGGTTG
TAAGTCGTCCAAATTTTGAACCAAACTTCTGGAGAAAAAGGATTTAACCC
TTGATGATGTCCTCAATATTGGTAAAACATCTGAAGCTGCAGCccatcaa
tcaaaacaaatggatGCTGCCAGCAAAGCATCACCAGAAGGAAGTGTAGA
TGAACTAAACAATGAAAAATGgagaattttaataaaatttcaaaaaatgg
aaaaacaaccAAATTTCGACAAAAACTGGCATCACCTGACAAGAACAACC
TGACCCTTGATGGAGATGAGACTGACAACAACCGTTGTACAGAGCATAAT
TACATTAAAGATAatgaaacaagctagatgctgaatggacctacctgatg
atgaaagttagatagcaatgcaaggagaaaaatgaaaaaaaatcagtcag
aa Run BLAST on NCBI transcript from alignment at scaffold_48:298513..299814 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068196 ID=TCONS_00068196|Name=TCONS_00068196|organism=Clytia hemisphaerica|type=transcript|length=1302bp|location=Sequence derived from alignment at scaffold_48:298513..299814 (Clytia hemisphaerica)
ttctgactgattttttttcatttttctccttgcattgctatctaactttc
atcatcaggtaggtccattcagcatctagcttgtttcatTATCTTTAATG
TAATTATGCTCTGTACAACGGTTGTTGTCAGTCTCATCTCCATCAAGGGT
CAGGTTGTTCTTGTCAGGTGATGCCAGTTTTTGTCGAAATTTggttgttt
ttccattttttgaaattttattaaaattctcCATTTTTCATTGTTTAGTT
CATCTACACTTCCTTCTGGTGATGCTTTGCTGGCAGCatccatttgtttt
gattgatggGCTGCAGCTTCAGATGTTTTACCAATATTGAGGACATCATC
AAGGGTTAAATCCTTTTTCTCCAGAAGTTTGGTTCAAAATTTGGACGACT
TACAACCTCGGATGACTTGATCTCTGATATGTTCACTTTGTTTGTCACCA
TATTCACAGCTAGTTGAAAGTTTAGGTAGTCGAGTAACAACTTGTTCAAT
GCTTTCACTGGCATTTTGTCTGGCATTTCCAAAAAATGAGCATTCATAGG
gaatgtttttcttaactttgaAATATTCCTCTAGTGCTGCAAAGGCTTCC
ATGGCTGCTCGGTCGCTAGACAAAAGTTACAGAAGACGGATATTTGGTAA
ACAATGGCCAAAAGCTCAGATCCCAAAATTTTGGGTCCGGAAAATAAAAC
CCATAATGACGGTTTGCGGGCAAGTAAAAAATGTGACATTTAGAGTAAAC
ATATATGGAGCTACAATTAAGTTTTTAGAAACCCatgtttcttttaattt
tctgagagtacatgcttttttttataagaatagtgtactttggatgaagg
tcaagtattcttaagaaattgcgaaaattgagggtgaaacagggtgaaat
attcttaacgtattcttacttttttagacttaacgttatacaaacatgag
aaatgatcaatttgagatcTTTGGATTTTTGAATGCACATTGGGagctaa
aattatatttctgctGTGGAGTCGTCGTttaaattttacaaaactttgtt
tGGGTGGTCCTTAAATTTTTAACGATTTAAAAACCTTTGTCCAAAATTTT
ATCCTATTAAAAACaccttttttaaaacattttgttcggCCTCACAATGT
TGCCTCTGAttgaaatcttgattttttgaaagtgcTTCATATTAATAAAT
GTTTTAATGAATAAAGATCAATTGGGAATCAATCTTTCTGCCTTTTTTAA
GATCTCTTATATTATATGCATTATTGATTTTTACATCAGTCCACAAATAC
TA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068196-exon-scaffold_48-1491911889:298513..299814 | TCONS_00068196-exon-scaffold_48-1491911889:298513..299814 | Clytia hemisphaerica | exon |
| TCONS_00068196-exon-scaffold_48-1510915933:298513..299814 | TCONS_00068196-exon-scaffold_48-1510915933:298513..299814 | Clytia hemisphaerica | exon |
| TCONS_00068196-exon-scaffold_48-1575043694:298513..299814 | TCONS_00068196-exon-scaffold_48-1575043694:298513..299814 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_48 | supercontig | scaffold_48:298513..299814 . |
Blast
The following BLAST results are available for this feature:
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