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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068195 ID=TCONS_00068195|Name=TCONS_00068195|organism=Clytia hemisphaerica|type=transcript|length=1214bp
GTGTCtttctataaggaattttataacacttcattaCAGATTAACAAGAC
GATCAGAAAACGAAAGCTTCtacgtttttcatttttgcattcAATTTTTA
GAATATGCTTTATTCAATATGAGGATTCCCTTTTCTGTAAAATTGTGATT
CCCCATGGTTGCAAAATGgtggctatgggtaattcctttgttcttttgct
gttttcttttgttctatgtgaGGTAAAGACACTGTAGTGCTTCCACTACA
GTAACTATAAGTTCTAAGTTTTTTATTGAATTATCAAATAATACGTAAgt
acattttcgtgattttaaacaAAGCATAAAAGTATGATTAGATGGGTTGA
GCTTTCCTTTACAATTggtttaatagaccttttcttgATGTCAtgtagaa
tagacctttttctaATCAGAATACCTGGTAATGCCAGACGATCAACTTCA
ATCAAAAATGACATCAATTTTGACAGGTTTCCAACGCGCCTTTCAAACAT
ATGAAATACGGCTATAAAGCAAAAATACAAACAGAATATCAGTACAAATC
TATTAGTAAATGAAATACTGAAAACATACAAGATGAGAAATATTATAGTT
CAAAGGCACAAGAATAGAAAACTATGCAAAATGGTACAAGAATAAAGTCA
GATAgtaaaaaaatacaagaaatacaAATATCAAACTTACTAAAGACACT
TTCCACAAACACCACATGAACACACTACAGCTTACATAACAACACACTGG
CAAACACATTACATACTGAACTTTTAAACCATAACATAAAACTATCACAT
GAATAACAATAATAAATAGACTAACAATACTAAAACACTTTACAATTCCC
AATACAATTGACACAAGCTAATACACATGAGACATTAAGTAATAATAAAT
AAGTGACAATTATAAATGTTTTACATACATAATACTTTTCAAAATGGATT
TACAAACAAACGTTACAGAACAAAAGATAAATCAAATAAACGTAAAATTT
AGAGCCTGACTGGCAGTGACAATACTATTTTCACTTCATAAATCAGAAGT
GAATATGTTTGCCTCTTTTTTACCGCTTTTCGCCTAGACGATATATATAT
ATCAAGAACATAGTAAAAGCAGGCTGTAAAATATATCTGCAACGGTAGAA
ATTTctccaactttcaacaatgatagaacaaactcatttaaacaaaattg
accatggcattttt Run BLAST on NCBI transcript from alignment at scaffold_48:287334..288547 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068195 ID=TCONS_00068195|Name=TCONS_00068195|organism=Clytia hemisphaerica|type=transcript|length=1214bp|location=Sequence derived from alignment at scaffold_48:287334..288547 (Clytia hemisphaerica)
aaaaatgccatggtcaattttgtttaaatgagtttgttctatcattgttg
aaagttggagAAATTTCTACCGTTGCAGATATATTTTACAGCCTGCTTTT
ACTATGTTCTTGATATATATATATCGTCTAGGCGAAAAGCGGTAAAAAAG
AGGCAAACATATTCACTTCTGATTTATGAAGTGAAAATAGTATTGTCACT
GCCAGTCAGGCTCTAAATTTTACGTTTATTTGATTTATCTTTTGTTCTGT
AACGTTTGTTTGTAAATCCATTTTGAAAAGTATTATGTATGTAAAACATT
TATAATTGTCACTTATTTATTATTACTTAATGTCTCATGTGTATTAGCTT
GTGTCAATTGTATTGGGAATTGTAAAGTGTTTTAGTATTGTTAGTCTATT
TATTATTGTTATTCATGTGATAGTTTTATGTTATGGTTTAAAAGTTCAGT
ATGTAATGTGTTTGCCAGTGTGTTGTTATGTAAGCTGTAGTGTGTTCATG
TGGTGTTTGTGGAAAGTGTCTTTAGTAAGTTTGATATTtgtatttcttgt
atttttttacTATCTGACTTTATTCTTGTACCATTTTGCATAGTTTTCTA
TTCTTGTGCCTTTGAACTATAATATTTCTCATCTTGTATGTTTTCAGTAT
TTCATTTACTAATAGATTTGTACTGATATTCTGTTTGTATTTTTGCTTTA
TAGCCGTATTTCATATGTTTGAAAGGCGCGTTGGAAACCTGTCAAAATTG
ATGTCATTTTTGATTGAAGTTGATCGTCTGGCATTACCAGGTATTCTGAT
tagaaaaaggtctattctacaTGACATcaagaaaaggtctattaaaccAA
TTGTAAAGGAAAGCTCAACCCATCTAATCATACTTTTATGCTTtgtttaa
aatcacgaaaatgtacTTACGTATTATTTGATAATTCAATAAAAAACTTA
GAACTTATAGTTACTGTAGTGGAAGCACTACAGTGTCTTTACCtcacata
gaacaaaagaaaacagcaaaagaacaaaggaattacccatagccacCATT
TTGCAACCATGGGGAATCACAATTTTACAGAAAAGGGAATCCTCATATTG
AATAAAGCATATTCTAAAAATTgaatgcaaaaatgaaaaacgtaGAAGCT
TTCGTTTTCTGATCGTCTTGTTAATCTGtaatgaagtgttataaaattcc
ttatagaaaGACAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068195-exon-scaffold_48-1491911889:287334..288547 | TCONS_00068195-exon-scaffold_48-1491911889:287334..288547 | Clytia hemisphaerica | exon |
| TCONS_00068195-exon-scaffold_48-1510915933:287334..288547 | TCONS_00068195-exon-scaffold_48-1510915933:287334..288547 | Clytia hemisphaerica | exon |
| TCONS_00068195-exon-scaffold_48-1575043694:287334..288547 | TCONS_00068195-exon-scaffold_48-1575043694:287334..288547 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_48 | supercontig | scaffold_48:287334..288547 . |
Blast
The following BLAST results are available for this feature:
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