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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068142 ID=TCONS_00068142|Name=TCONS_00068142|organism=Clytia hemisphaerica|type=transcript|length=7796bpRun BLAST on NCBI protein sequence of TCONS_00068142-protein >TCONS_00068142-protein ID=TCONS_00068142-protein|Name=TCONS_00068142-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1546bp MMQTCCSHILFLVLGVILSTPWSKIANADDGGTGNNGVVPYKPCFLNQPQRun BLAST on NCBI transcript from alignment at scaffold_48:10462..27002- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00068142 ID=TCONS_00068142|Name=TCONS_00068142|organism=Clytia hemisphaerica|type=transcript|length=16541bp|location=Sequence derived from alignment at scaffold_48:10462..27002- (Clytia hemisphaerica) Coding sequence (CDS) from alignment at scaffold_48:10462..27002- >TCONS_00068142 ID=TCONS_00068142|Name=TCONS_00068142|organism=Clytia hemisphaerica|type=CDS|length=92820bp|location=Sequence derived from alignment at scaffold_48:10462..27002- (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Annotated Terms
The following terms have been associated with this transcript:
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Blast
BLAST of TCONS_00068142 vs. Swiss-Prot (Human)
Match: INSR (Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4) HSP 1 Score: 723.005 bits (1865), Expect = 0.000e+0 Identity = 488/1375 (35.49%), Postives = 719/1375 (52.29%), Query Frame = 1
Query: 412 NELKGCTVLHGSLILRRIIQYKVVNTTVPDLS--SLQEITGYLV---ITFFAEVADLLPSLTVIRGNDLVGNYAFVVYFNTYTKFIYFPNLTTILNGGVRVSMNKILCYVGTVRWKSIVKDKEQKSKYGIVVTDNNDNCDSACYPNRCYAGKGHGNNP----KAQF---CWGPGTEKNTQCQRFCDSRCDLQGCVTGTSSKCCHSLCLGGCSKADDPYACSACLKYRVWSTGLCVNQCPVNTY------LVDNLFCKPQCPGWSAEDQKNKIVHHFVM-DSKCVEQCPAGYI--AKDKTCQECSRVDSCPKVCILKEERLENGLMDRIAYIRVPSDIVNKGLAGCTEIIGSLSFEIPKGTGKSEEYLKNLELLRKVRGHISIKKT-SFRNLNFLSNLEIIDPPRHNLLYRRYALQIYENELLETLWAPSKK-INVTNGQIFAQYNDRLCPREIFKVQKLMHTSKGENVTGDISTQTNGNRVFCDVERLEISVEEIHIPQHIVDKLTKVDPNEVLPFLSWSNPDFIKYLDYLQCLTDKCMLVQWQ--FKRDQRSSYNIIFYQVFYRKLXXXXXXXXXXXXXXXXNNLEWKNIFVERP---TDFAKTSTMEPMLNNLTPFARYAVFVREVVSKGEAR-----TSRIHYLRISPGIPTAPVGLEASFLSSESIHLKWNQPDQPNGIVNKYIIYWQPSIYSFWKEHSYIEWCKRDNVKSGVVHQSNFGNKKPPIPK------GENEGQCLANNTCVCSDKDKPTSEAIKWDRDNSAFRAEFGERINKILFTKERSXXXXXXXXXXXXXXXXXXASVDNLSRQSTNKSLSELEKYNNQLRQGKVNLKNVEVTGDIFNFTVNGLQYFQDYEFHVCACTEQINISGIIYGGCAKPKTDPNDVGYPCAIAQARTDAKSGADAL-GSALRLAVEDQLFNITWLPPVKPNAVVLKYDVEIKHEDRNNDIIH-CRSARDTSFS-----RTMQPGTYYIRARAQTPAGNGSWSEAVEL-IIEQPEVDNPLILPXXXXXXXXXXXXXXXXXYYAFFRRNLEKDSPGVLYASVNPEYMNSNE-----VYVPDEWELNRETIELLRELGQGSFGMVYEGIAHD-INGLSELRVAVKTVNENATIRERIEFLQEASIMKAFNTNHVVRLIGVVSQGQPTFVVMELMAKGDLKNFLRSRRPE-EKNPTLLPPLRAEILQMAAEIADGMAYLAARKYVHRDLAARNCMVAVDFTVKIGDFGMARDIYETDYYRKGGKGLLPVRWMAPESLRDGIFTTASDVWSFGVVLWEVATLAAQPYQGKSNEEVLKFILAGGKLEYPSDCDKRLQQFMEMCWSKDPKMRPSFLEIVRLLEDDVSEDFVQCSFYHEMKKKA 4374
+EL+ C+V+ G L + ++ +K DLS L IT YL+ + + DL P+LTVIRG+ L NYA V++ + K + NL I G VR+ N LCY+ T+ W I+ E Y ++ D+N+ C C P KG N P QF CW ++ CQ+ C + C GC CCHS CLG CS+ DDP C AC + + G CV CP Y V+ FC Q ++ + + H +V+ ++KC+ +CP+GY + + C C + CPKVC L E + S + L GCT I GSL I G + E NL L+ ++ G++ I+++ + +L+F L +I L Y+ +N+ L LW SK + +T G++F YN +LC EI K++++ T KG DI+ +TNG++ C+ NE+L F Y++ DK +L++W+ + D R +++ + +FY++ + A N+ W + ++ P D + ++ L P+ +YA+FV+ +V+ + R S I Y++ P+ P+ + SS I LKW P PNG + Y+++W+ ++ E + D G+ S PP ++E + A C C D S+ +K + + S+FR F + ++ ++F ++ + + V N++ + + + + + E + + ++GL++F Y + AC + P + A ART ++ AD + G E+ + ++ W P +PN +++ Y E+ + ++ +H C S + + R + PG Y +R RA + AGNGSW+E + + +V + + + + +F+ V++ Y F R+ G LYAS NPEY+++++ VYVPDEWE++RE I LLRELGQGSFGMVYEG A D I G +E RVAVKTVNE+A++RERIEFL EAS+MK F +HVVRL+GVVS+GQPT VVMELMA GDLK++LRS RPE E NP PP E++QMAAEIADGMAYL A+K+VHRDLAARNCMVA DFTVKIGDFGM RDIYETDYYRKGGKGLLPVRWMAPESL+DG+FTT+SD+WSFGVVLWE+ +LA QPYQG SNE+VLKF++ GG L+ P +C +R+ M MCW +PKMRP+FLEIV LL+DD+ F + SF+H + KA
Sbjct: 48 HELENCSVIEGHLQI--LLMFKTRPEDFRDLSFPKLIMITDYLLLFRVYGLESLKDLFPNLTVIRGSRLFFNYALVIFEMVHLKELGLYNLMNITRGSVRIEKNNELCYLATIDWSRILDSVEDN--YIVLNKDDNEECGDIC-PG---TAKGKTNCPATVINGQFVERCW-----THSHCQKVCPTICKSHGCTA--EGLCCHSECLGNCSQPDDPTKCVACRNF--YLDGRCVETCPPPYYHFQDWRCVNFSFC--QDLHHKCKNSRRQGCHQYVIHNNKCIPECPSGYTMNSSNLLCTPC--LGPCPKVCHLLE-----------GEKTIDSVTSAQELRGCTVINGSLIINIRGGNNLAAELEANLGLIEEISGYLKIRRSYALVSLSFFRKLRLIR--GETLEIGNYSFYALDNQNLRQLWDWSKHNLTITQGKLFFHYNPKLCLSEIHKMEEVSGT-KGRQERNDIALKTNGDQASCE--------------------------NELLKF------------SYIRTSFDK-ILLRWEPYWPPDFR---DLLGFMLFYKEAPYQNVTEFDGQDACGSNS--WTVVDIDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWE-------RQAEDSELFELDYCLKGLKLPSR--TWSPPFESEDSQKHNQSEYEDSAGECCSCPKTD---SQILK-ELEESSFRKTFEDYLHNVVFVPRKTSSGTGAEDPRPSRKRRSLGDVGNVT-VAVPTVAAFPNTSSTSVPTSPEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDT----------------PEERCSVAAYVSARTMPEAKADDIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLY--EVSYRRYGDEELHLCVSRKHFALERGCRLRGLSPGNYSVRIRATSLAGNGSWTEPTYFYVTDYLDVPSNIAKIIIGPLIFVFLFSVVIGSIYLFLRKRQPDGPLGPLYASSNPEYLSASDVFPCSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSFFHSEENKA 1311 The following BLAST results are available for this feature:
BLAST of TCONS_00068142 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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