TCONS_00068122 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068122
Unique NameTCONS_00068122
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1945

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068122 ID=TCONS_00068122|Name=TCONS_00068122|organism=Clytia hemisphaerica|type=transcript|length=1945bp
gttttgaaggaaaatatgaAATGGTTTGAATAATAAGCAACGTTACTTAC
TGTTATCTACATCAACGAGAAAGCGAAAAACAACTTAAAGACAATCTCGA
CCTTTCGTCAGAAAGGATGTTATACGGTAGTTACCAAGTAAATAGACgtt
tcgaacctttttttaaatatcattttgattttagagTAAAATATACATAC
ATACAAGAGCTGGATTCTCAGAGAAAATCATCGAAGATGAAGTTGTTCgc
attcatttgttttttatcattGGCACATGCACTCTCTAAAAACGAAATCG
AAAACATTCGCAAAGAACTCAATGCTGAGTTGACACAGTTAGAAGATGAA
AATACGAAAAGGGCGAACAATCAGGTGGCTTCTGTTGTCAAGAGCGACCA
AGATGTTGAAATAGACGCGCTTCTTCGTCAACTAACGAAAAAGGAGAAAG
CTGATGGATCAAAAGACATTCTCCGACAAATCAATTTGGATAAAAAAGAC
TCCTCCAAGAATGACCTTTGGATAACAATGGAAAAAGCTAAAATAGATAG
AGATGAAGCAAACAGCAAAAGAAGCACACTTGACAAAGaaaaagcaaaag
AGCTTTTGGAACATCATTTTGACAAGACAGGCAAAAGAAGTCAAGACAAT
CAGGCTGCCGCAAGTTTGGATGCTTTATCAAAATTGTTGATGAATGAAGA
AAAGAAGTCGGAGAAGCGAGAAGTTGTGTCGGACTTTGGTCGATACATCC
CACCGGAAAAATGCAATGACCAGAGATCTGATTGTCATACCTACAAAGAA
TATTGTGAGACACCAGAATACCGTCTAATGATGAGAGAACGATGTCCTTT
CACCTGTGGTGCTTGCATGAAATGTTTACCAGACAAATGGCCAGCCAAGT
ATTGCAAACGTATCGTAAAGTTGGCAATGTGCAATGTCGATCGTTTCAAA
GATCGCATCAGAGAAAACTGCTTCGATTCATGTGGATTCTGCAGAGCTAA
CGCACCACCAGCTTGCTCATTTGACCCTGAAGGATGTTGTTGGGATGGCA
AACGATTCGCCAAAGATGGATGCAGAAATTGTGCAGATaataaacaaatt
aaaaacataTGCGAGAGATTAAAAATGGAATGCACGAACAAATATTCACC
AGGGAAATATATGAAAGAACATTGTCCTGTCACGTGCGGATTCTGTAatc
CAAAAAAGGAATGCCATGACACCTTCAGGTTCAGAAAAGAATGTAAAACA
TGGGCTGCCAAGGGAGAATGTGAAGTTGGAGCAACAAAATCCATTTGTCC
ACGCTCTTGCAATGCATGTGCCGATCaaaagaaccagtgaaccaataAAA
AGAGAGTTTATTGGAGAAGAGGAAGGATGGGAGATTCCTACCGGTTATGC
AGCAGGATCGAAAAGAAAGATGGAAGGGCTGCAATAAATttcattggttg
aaaaaatacctagaaaaggaaaatatttgtTATTGTAAATAAGGCTTTCA
CACTTAACAAATAGCAACAAcctttgatgaaatttttgtttcatgaaAGA
GGCCTGCAAAAATACTGACAGTCTTTGACTAAAAGTTGACACCCTGTTGC
AAAAATCGCCATCAGTGATATGATAAatccccaattttttttaaagaagc
tgttttcgaaaagttttagggtagaaatattttaatgtaaaattATTGTT
CATTCGATATCTTTTATGATCCATATATATTAATGCATAACAAAAACTTT
ATGAACAAAAGAATTAGGACAAACCAATCTATTGTATCTCGTCATCACTT
AAAAAGGTTAAAACctccaaatttcaagaaaatttagaaattgcaAACTT
TTCTGTTGCTTTCGCATAATAAGATTTTTCTTATGATGGCCTAACCATCA
CCCCCTGAATTTCATTACCAGAGTTATTATTCCTTACTTTTAAAA
Run BLAST on NCBI

protein sequence of TCONS_00068122-protein

>TCONS_00068122-protein ID=TCONS_00068122-protein|Name=TCONS_00068122-protein|organism=Clytia hemisphaerica|type=polypeptide|length=407bp
MLYGSYQVNRRFEPFFKYHFDFRVKYTYIQELDSQRKSSKMKLFAFICFL
SLAHALSKNEIENIRKELNAELTQLEDENTKRANNQVASVVKSDQDVEID
ALLRQLTKKEKADGSKDILRQINLDKKDSSKNDLWITMEKAKIDRDEANS
KRSTLDKEKAKELLEHHFDKTGKRSQDNQAAASLDALSKLLMNEEKKSEK
REVVSDFGRYIPPEKCNDQRSDCHTYKEYCETPEYRLMMRERCPFTCGAC
MKCLPDKWPAKYCKRIVKLAMCNVDRFKDRIRENCFDSCGFCRANAPPAC
SFDPEGCCWDGKRFAKDGCRNCADNKQIKNICERLKMECTNKYSPGKYMK
EHCPVTCGFCNPKKECHDTFRFRKECKTWAAKGECEVGATKSICPRSCNA
CADQKNQ
Run BLAST on NCBI

transcript from alignment at scaffold_48:194199..198634+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068122 ID=TCONS_00068122|Name=TCONS_00068122|organism=Clytia hemisphaerica|type=transcript|length=4436bp|location=Sequence derived from alignment at scaffold_48:194199..198634+ (Clytia hemisphaerica)
gttttgaaggaaaatatgaAATGGTTTGAATAATAAGCAACGTTACTTAC
TGTTATCTACATCAACGAGAAAGCGAAAAACAACTTAAAGACAATCTCGA
CCTTTCGTCAGAAAGGATGTTATACGGTAGTTACCAAGTAAATAGACgtt
tcgaacctttttttaaatatcattttgattttagagTAAAATATACATAC
ATACAAGAGCTGGATTCTCAGAGAAAATCATCGAAGATGAAGTTGTTCgc
attcatttgttttttatcattGGCACATGCACTCTCTAAAAACGAAATCG
AAAACATTCGCAAAGAACTCAATGCTGGTAAGTTTGACTTTCAACTTTTT
ATATGTAATTAACCACTGTGGAAATCTTCCTCTGTCAGGAAAATTAGGCC
GAGATGGTTAATGTCTCAATATTCAATAAAGGATTGAGAATAAATTCAAT
GATCTTCACAAATATTTCGCATTATTTACGAAATACACAAAGTTTAATAT
ATCTAACACAAAATCCTTTCATCAATAGAGTTGACACAGTTAGAAGATGA
AAATACGAAAAGGGCGAACAATCAGGTGGCTTCTGTTGTCAAGAGCGACC
AAGATGGTAAGTGTCTTCTTCTCTATATATTAAAAGGGCACAAGACAGTA
AATAGCACTCTTTGATTTactatgaagaaaaaaaacaaggatATTTCCGT
CAATTTAGCAATTATAGGAGAGTGATACGGCTTGCGTGAAATGACTGCAA
CAACTGGAAATGTGAATTTCCCGTATATTCATATTTTCTTACAGTTGAAA
TAGACGCGCTTCTTCGTCAACTAACGAAAAAGGAGAAAGCTGATGGATCA
AAAGACATTCTCCGACAAATCAATTTGGATAAAAAAGACTCCTCCAAGAA
TGACCTTTGGATAACAATGGAAAAAGCTAAAATAGATAGAGGTATAAAAA
TACACATAAGTATAATTATTACAATCCAATATTCAagtaaacactttttt
tcacGTTATAAATACACAGCAAATACACTATTCACTTTTGCGGGTAATAA
GCGATTTCCACAATACACTTACAaggtcacaaaatggtaaacTCCACTCC
AGACACTTAGTACACTATATGTTAGAGACCACTGGTATTATATAATATTG
ACACCAAATaaattattgtattttttgttgcACAACACAAGATGAAGCAA
ACAGCAAAAGAAGCACACTTGACAAAGGTGGGTGATAGATACACTTGCAT
CTAtgtattttttgcaatatttatcTATGTACAGCAAGCACTAATAAATA
TAAAAGTACACTGTAATCTCtgttaagaacttttttagaaagaaaGTTTT
GGGTGGTTAAGACAGACAAAAacgttttttctaagaaaacgaTTTTGCTT
CTTCTGAAAATTGGAAAGAAATAATTGAAAACTCAAAACTCAATcatttc
tttagaaaaagcaaaagAGCTTTTGGAACATCATTTTGACAAGACAGGCA
AAAGAAGTCAAGACAATCAGGCTGCCGCAAGTTTGGATGCTTTATCAAAA
TTGTTGATGAATGAAGGTAGGTGGACAGATGATATTATCAATGAATATCA
GTATTAAAACTAGAACGTGATAAACAAAGATGCAAAAAAGGAAACCTGTG
TTTACCGTGGCAGAACCGAACAAACTAGTTCTTGTTTAGCCGCCGTGGTT
GTAAAACACACGGTCGCGAGTTAAAACACGCCGCCGCTTGTTTAGGTTAT
TTAATTTCCCATTCTGGTCTTGATTATACAGCGTTTGGTCTAGGTTTTAT
CCAGTTATTTATAAAGAATCGGGTAAGTGCAGATTTTTAGACAGTCAATA
GATGCGGCCGCTTATATTCAGATTGTCAAAACATGAGGCCGGCTGTATTT
AGACCATTAAGCACGCGGCTGCCTACATTTAGATCGCCAATACAAATGTA
AGCGGCCGCATGTCTTAATGGTCTGAATATAAGCGGCCGCATGTCTCAAT
GGTCTGAATATAAGTGACAGTCTGCTTTGATTGTTTTTACGTAGTAAAAT
AGACCAGATCAGACGGAATTGCGAGAAAATGCAGACCTTAAACAAGTGTT
CGCTTGTTTTGGATGAAATAAGCGACCACTTTTTATAAATGGCGGTCACT
TGTATGCAGCCACGTGTTATTATAGGCGGCCGCTTGTTGTGATAGGCGGC
CGcttgttttaattgttttaagCAGTCGCGTGTTTTAACTGCAGTAGCTA
AACAAGAACTAGATTGTTCGGATCTGCCACGGTATGTGCTAAAACTAAAA
ACGTGAAAGCATTAGTAGAGATTTTGAATAAAACATCGAACAATCAGAGC
AATGCTCGACTCGAGTCGAAAAATCTGACCACACTAAAAGTAGAAGAATT
TTCCGTTTAATTTCTCAGAAAAGAAGTCGGAGAAGCGAGAAGTTGTGTCG
GACTTTGGTCGATACATCCCACCGGAAAAATGCAATGACCAGAGATCTGA
TTGTCATACCTACAAAGAATATTGTGAGACACCAGAATACCGTCTAATGA
TGAGAGAACGATGTCCTTTCACCTGTGGTGCTTGCAGTAAGTGCAAATAA
ATGATCAGAAATTGAGAATGAGTGAACTCTCTTTTTTCCAGTCGAAGTTA
TTTTAGTCAAACGGaagaaaatatttcatcaaatttggtAGCTATTCAAA
AGACTTGTTCCTAATAAGGAATCAACAAGTTGAATGGATTTCTATTTCAT
TTTCTTGCAGTGAAATGTTTACCAGACAAATGGCCAGCCAAGTATTGCAA
ACGTATCGTAAAGTTGGCAATGTGCAATGTCGATCGTTTCAAAGATCGCA
TCAGAGAAAACTGCTTCGATTCATGTGGATTCTGCAGtaagaataacttt
tgataatcCTGATTTCAATAGTTCCATTAATATACCCTATCAACCCTTAT
GGCGTAAGGAGTTGACCAGGTAGAGTTGACCAGGtagaattgacgtcaaa
tttttgtGTATGAGAAAATCAATGAGACGAATTAGAGATTTGACGTCATT
CCTACCTGATTAACTTTGACCCAGTCTTCAACGCTGTAAAGACAATGTAG
GCGAGGAGGGAAGATGACATTATTggaaaactttgagaaatttaaaaaat
cttgctttGATTTCAGGAGCTAACGCACCACCAGCTTGCTCATTTGACCC
TGAAGGATGTTGTTGGGATGGCAAACGATTCGCCAAAGATGGATGCAGAA
GTAAGTAACCCTTTATACAttagcatttttgtttttgaagggAGCTTCTT
TAAATTAAGTGGTTGGATAGCTCGTGACATAAAGTGGAGCAAAAGCAAAC
ATTCTTGAAGATTTTGGATGTTATATTAAACCATATCATTGTGTTTTAGA
TTGTGCAGATaataaacaaattaaaaacataTGCGAGAGATTAAAAATGG
AATGCACGAACAAATATTCACCAGGGAAATATATGAAAGAACATTGTCCT
GTCACGTGCGGATTCTGTAGTAAGTTTACATGCTCCGTTGATCAATCAGA
ACTATGAATTAAATATGAAATTGTCACCAAATGAAAATTCGAAGCCAGGA
AGTCTCCTTATTAAATACATTGCATTTCTCTAAAGTCCAAAGTAAGAGGC
TAGATAATACttacaaaataatttatttttttctttagatcCAAAAAAGG
AATGCCATGACACCTTCAGGTTCAGAAAAGAATGTAAAACATGGGCTGCC
AAGGGAGAATGTGAAGTTGGAGCAACAAAATCCATTTGTCCACGCTCTTG
CAATGCATGTGCCGATCaaaagaaccagtgaaccaataAAAAGAGAGTTT
ATTGGAGAAGAGGAAGGATGGGAGATTCCTACCGGTTATGCAGCAGGATC
GAAAAGAAAGATGGAAGGGCTGCAATAAATttcattggttgaaaaaatac
ctagaaaaggaaaatatttgtTATTGTAAATAAGGCTTTCACACTTAACA
AATAGCAACAAcctttgatgaaatttttgtttcatgaaAGAGGCCTGCAA
AAATACTGACAGTCTTTGACTAAAAGTTGACACCCTGTTGCAAAAATCGC
CATCAGTGATATGATAAatccccaattttttttaaagaagctgttttcga
aaagttttagggtagaaatattttaatgtaaaattATTGTTCATTCGATA
TCTTTTATGATCCATATATATTAATGCATAACAAAAACTTTATGAACAAA
AGAATTAGGACAAACCAATCTATTGTATCTCGTCATCACTTAAAAAGGTT
AAAACctccaaatttcaagaaaatttagaaattgcaAACTTTTCTGTTGC
TTTCGCATAATAAGATTTTTCTTATGATGGCCTAACCATCACCCCCTGAA
TTTCATTACCAGAGTTATTATTCCTTACTTTTAAAA

Coding sequence (CDS) from alignment at scaffold_48:194199..198634+

>TCONS_00068122 ID=TCONS_00068122|Name=TCONS_00068122|organism=Clytia hemisphaerica|type=CDS|length=12240bp|location=Sequence derived from alignment at scaffold_48:194199..198634+ (Clytia hemisphaerica)
ATGTTATACGGTAGTTACCAAGTAAATAGACgtttcgaacctttttttaa
atatcattttgattttagagTAAAATATACATACATACAAGAGCTGGATT
CTCAGAGAAAATCATCGAAGATGAAGTTGTTCgcattcatttgtttttta
tcattGGCACATGCACTCTCTAAAAACGAAATCGAAAACATTCGCAAAGA
ACTCAATGCTGAGTTGACACAGTTAGAAGATGAAAATACGAAAAGGGCGA
ACAATCAGGTGGCTTCTGTTGTCAAGAGCGACCAAGATGTTGAAATAGAC
GCGCTTCTTCGTCAACTAACGAAAAAGGAGAAAGCTGATGGATCAAAAGA
CATTCTCCGACAAATCAATTTGGATAAAAAAGACTCCTCCAAGAATGACC
TTTGGATAACAATGGAAAAAGCTAAAATAGATAGAGATGAAGCAAACAGC
AAAAGAAGCACACTTGACAAAGaaaaagcaaaagAGCTTTTGGAACATCA
TTTTGACAAGACAGGCAAAAGAAGTCAAGACAATCAGGCTGCCGCAAGTT
TGGATGCTTTATCAAAATTGTTGATGAATGAAGAAAAGAAGTCGGAGAAG
CGAGAAGTTGTGTCGGACTTTGGTCGATACATCCCACCGGAAAAATGCAA
TGACCAGAGATCTGATTGTCATACCTACAAAGAATATTGTGAGACACCAG
AATACCGTCTAATGATGAGAGAACGATGTCCTTTCACCTGTGGTGCTTGC
ATGAAATGTTTACCAGACAAATGGCCAGCCAAGTATTGCAAACGTATCGT
AAAGTTGGCAATGTGCAATGTCGATCGTTTCAAAGATCGCATCAGAGAAA
ACTGCTTCGATTCATGTGGATTCTGCAGAGCTAACGCACCACCAGCTTGC
TCATTTGACCCTGAAGGATGTTGTTGGGATGGCAAACGATTCGCCAAAGA
TGGATGCAGAAATTGTGCAGATaataaacaaattaaaaacataTGCGAGA
GATTAAAAATGGAATGCACGAACAAATATTCACCAGGGAAATATATGAAA
GAACATTGTCCTGTCACGTGCGGATTCTGTAatcCAAAAAAGGAATGCCA
TGACACCTTCAGGTTCAGAAAAGAATGTAAAACATGGGCTGCCAAGGGAG
AATGTGAAGTTGGAGCAACAAAATCCATTTGTCCACGCTCTTGCAATGCA
TGTGCCGATCaaaagaaccagtgaATGTTATACGGTAGTTACCAAGTAAA
TAGACgtttcgaacctttttttaaatatcattttgattttagagTAAAAT
ATACATACATACAAGAGCTGGATTCTCAGAGAAAATCATCGAAGATGAAG
TTGTTCgcattcatttgttttttatcattGGCACATGCACTCTCTAAAAA
CGAAATCGAAAACATTCGCAAAGAACTCAATGCTGAGTTGACACAGTTAG
AAGATGAAAATACGAAAAGGGCGAACAATCAGGTGGCTTCTGTTGTCAAG
AGCGACCAAGATGTTGAAATAGACGCGCTTCTTCGTCAACTAACGAAAAA
GGAGAAAGCTGATGGATCAAAAGACATTCTCCGACAAATCAATTTGGATA
AAAAAGACTCCTCCAAGAATGACCTTTGGATAACAATGGAAAAAGCTAAA
ATAGATAGAGATGAAGCAAACAGCAAAAGAAGCACACTTGACAAAGaaaa
agcaaaagAGCTTTTGGAACATCATTTTGACAAGACAGGCAAAAGAAGTC
AAGACAATCAGGCTGCCGCAAGTTTGGATGCTTTATCAAAATTGTTGATG
AATGAAGAAAAGAAGTCGGAGAAGCGAGAAGTTGTGTCGGACTTTGGTCG
ATACATCCCACCGGAAAAATGCAATGACCAGAGATCTGATTGTCATACCT
ACAAAGAATATTGTGAGACACCAGAATACCGTCTAATGATGAGAGAACGA
TGTCCTTTCACCTGTGGTGCTTGCATGAAATGTTTACCAGACAAATGGCC
AGCCAAGTATTGCAAACGTATCGTAAAGTTGGCAATGTGCAATGTCGATC
GTTTCAAAGATCGCATCAGAGAAAACTGCTTCGATTCATGTGGATTCTGC
AGAGCTAACGCACCACCAGCTTGCTCATTTGACCCTGAAGGATGTTGTTG
GGATGGCAAACGATTCGCCAAAGATGGATGCAGAAATTGTGCAGATaata
aacaaattaaaaacataTGCGAGAGATTAAAAATGGAATGCACGAACAAA
TATTCACCAGGGAAATATATGAAAGAACATTGTCCTGTCACGTGCGGATT
CTGTAatcCAAAAAAGGAATGCCATGACACCTTCAGGTTCAGAAAAGAAT
GTAAAACATGGGCTGCCAAGGGAGAATGTGAAGTTGGAGCAACAAAATCC
ATTTGTCCACGCTCTTGCAATGCATGTGCCGATCaaaagaaccagtgaAT
GTTATACGGTAGTTACCAAGTAAATAGACgtttcgaacctttttttaaat
atcattttgattttagagTAAAATATACATACATACAAGAGCTGGATTCT
CAGAGAAAATCATCGAAGATGAAGTTGTTCgcattcatttgttttttatc
attGGCACATGCACTCTCTAAAAACGAAATCGAAAACATTCGCAAAGAAC
TCAATGCTGAGTTGACACAGTTAGAAGATGAAAATACGAAAAGGGCGAAC
AATCAGGTGGCTTCTGTTGTCAAGAGCGACCAAGATGTTGAAATAGACGC
GCTTCTTCGTCAACTAACGAAAAAGGAGAAAGCTGATGGATCAAAAGACA
TTCTCCGACAAATCAATTTGGATAAAAAAGACTCCTCCAAGAATGACCTT
TGGATAACAATGGAAAAAGCTAAAATAGATAGAGATGAAGCAAACAGCAA
AAGAAGCACACTTGACAAAGaaaaagcaaaagAGCTTTTGGAACATCATT
TTGACAAGACAGGCAAAAGAAGTCAAGACAATCAGGCTGCCGCAAGTTTG
GATGCTTTATCAAAATTGTTGATGAATGAAGAAAAGAAGTCGGAGAAGCG
AGAAGTTGTGTCGGACTTTGGTCGATACATCCCACCGGAAAAATGCAATG
ACCAGAGATCTGATTGTCATACCTACAAAGAATATTGTGAGACACCAGAA
TACCGTCTAATGATGAGAGAACGATGTCCTTTCACCTGTGGTGCTTGCAT
GAAATGTTTACCAGACAAATGGCCAGCCAAGTATTGCAAACGTATCGTAA
AGTTGGCAATGTGCAATGTCGATCGTTTCAAAGATCGCATCAGAGAAAAC
TGCTTCGATTCATGTGGATTCTGCAGAGCTAACGCACCACCAGCTTGCTC
ATTTGACCCTGAAGGATGTTGTTGGGATGGCAAACGATTCGCCAAAGATG
GATGCAGAAATTGTGCAGATaataaacaaattaaaaacataTGCGAGAGA
TTAAAAATGGAATGCACGAACAAATATTCACCAGGGAAATATATGAAAGA
ACATTGTCCTGTCACGTGCGGATTCTGTAatcCAAAAAAGGAATGCCATG
ACACCTTCAGGTTCAGAAAAGAATGTAAAACATGGGCTGCCAAGGGAGAA
TGTGAAGTTGGAGCAACAAAATCCATTTGTCCACGCTCTTGCAATGCATG
TGCCGATCaaaagaaccagtgaATGTTATACGGTAGTTACCAAGTAAATA
GACgtttcgaacctttttttaaatatcattttgattttagagTAAAATAT
ACATACATACAAGAGCTGGATTCTCAGAGAAAATCATCGAAGATGAAGTT
GTTCgcattcatttgttttttatcattGGCACATGCACTCTCTAAAAACG
AAATCGAAAACATTCGCAAAGAACTCAATGCTGAGTTGACACAGTTAGAA
GATGAAAATACGAAAAGGGCGAACAATCAGGTGGCTTCTGTTGTCAAGAG
CGACCAAGATGTTGAAATAGACGCGCTTCTTCGTCAACTAACGAAAAAGG
AGAAAGCTGATGGATCAAAAGACATTCTCCGACAAATCAATTTGGATAAA
AAAGACTCCTCCAAGAATGACCTTTGGATAACAATGGAAAAAGCTAAAAT
AGATAGAGATGAAGCAAACAGCAAAAGAAGCACACTTGACAAAGaaaaag
caaaagAGCTTTTGGAACATCATTTTGACAAGACAGGCAAAAGAAGTCAA
GACAATCAGGCTGCCGCAAGTTTGGATGCTTTATCAAAATTGTTGATGAA
TGAAGAAAAGAAGTCGGAGAAGCGAGAAGTTGTGTCGGACTTTGGTCGAT
ACATCCCACCGGAAAAATGCAATGACCAGAGATCTGATTGTCATACCTAC
AAAGAATATTGTGAGACACCAGAATACCGTCTAATGATGAGAGAACGATG
TCCTTTCACCTGTGGTGCTTGCATGAAATGTTTACCAGACAAATGGCCAG
CCAAGTATTGCAAACGTATCGTAAAGTTGGCAATGTGCAATGTCGATCGT
TTCAAAGATCGCATCAGAGAAAACTGCTTCGATTCATGTGGATTCTGCAG
AGCTAACGCACCACCAGCTTGCTCATTTGACCCTGAAGGATGTTGTTGGG
ATGGCAAACGATTCGCCAAAGATGGATGCAGAAATTGTGCAGATaataaa
caaattaaaaacataTGCGAGAGATTAAAAATGGAATGCACGAACAAATA
TTCACCAGGGAAATATATGAAAGAACATTGTCCTGTCACGTGCGGATTCT
GTAatcCAAAAAAGGAATGCCATGACACCTTCAGGTTCAGAAAAGAATGT
AAAACATGGGCTGCCAAGGGAGAATGTGAAGTTGGAGCAACAAAATCCAT
TTGTCCACGCTCTTGCAATGCATGTGCCGATCaaaagaaccagtgaATGT
TATACGGTAGTTACCAAGTAAATAGACgtttcgaacctttttttaaatat
cattttgattttagagTAAAATATACATACATACAAGAGCTGGATTCTCA
GAGAAAATCATCGAAGATGAAGTTGTTCgcattcatttgttttttatcat
tGGCACATGCACTCTCTAAAAACGAAATCGAAAACATTCGCAAAGAACTC
AATGCTGAGTTGACACAGTTAGAAGATGAAAATACGAAAAGGGCGAACAA
TCAGGTGGCTTCTGTTGTCAAGAGCGACCAAGATGTTGAAATAGACGCGC
TTCTTCGTCAACTAACGAAAAAGGAGAAAGCTGATGGATCAAAAGACATT
CTCCGACAAATCAATTTGGATAAAAAAGACTCCTCCAAGAATGACCTTTG
GATAACAATGGAAAAAGCTAAAATAGATAGAGATGAAGCAAACAGCAAAA
GAAGCACACTTGACAAAGaaaaagcaaaagAGCTTTTGGAACATCATTTT
GACAAGACAGGCAAAAGAAGTCAAGACAATCAGGCTGCCGCAAGTTTGGA
TGCTTTATCAAAATTGTTGATGAATGAAGAAAAGAAGTCGGAGAAGCGAG
AAGTTGTGTCGGACTTTGGTCGATACATCCCACCGGAAAAATGCAATGAC
CAGAGATCTGATTGTCATACCTACAAAGAATATTGTGAGACACCAGAATA
CCGTCTAATGATGAGAGAACGATGTCCTTTCACCTGTGGTGCTTGCATGA
AATGTTTACCAGACAAATGGCCAGCCAAGTATTGCAAACGTATCGTAAAG
TTGGCAATGTGCAATGTCGATCGTTTCAAAGATCGCATCAGAGAAAACTG
CTTCGATTCATGTGGATTCTGCAGAGCTAACGCACCACCAGCTTGCTCAT
TTGACCCTGAAGGATGTTGTTGGGATGGCAAACGATTCGCCAAAGATGGA
TGCAGAAATTGTGCAGATaataaacaaattaaaaacataTGCGAGAGATT
AAAAATGGAATGCACGAACAAATATTCACCAGGGAAATATATGAAAGAAC
ATTGTCCTGTCACGTGCGGATTCTGTAatcCAAAAAAGGAATGCCATGAC
ACCTTCAGGTTCAGAAAAGAATGTAAAACATGGGCTGCCAAGGGAGAATG
TGAAGTTGGAGCAACAAAATCCATTTGTCCACGCTCTTGCAATGCATGTG
CCGATCaaaagaaccagtgaATGTTATACGGTAGTTACCAAGTAAATAGA
CgtttcgaacctttttttaaatatcattttgattttagagTAAAATATAC
ATACATACAAGAGCTGGATTCTCAGAGAAAATCATCGAAGATGAAGTTGT
TCgcattcatttgttttttatcattGGCACATGCACTCTCTAAAAACGAA
ATCGAAAACATTCGCAAAGAACTCAATGCTGAGTTGACACAGTTAGAAGA
TGAAAATACGAAAAGGGCGAACAATCAGGTGGCTTCTGTTGTCAAGAGCG
ACCAAGATGTTGAAATAGACGCGCTTCTTCGTCAACTAACGAAAAAGGAG
AAAGCTGATGGATCAAAAGACATTCTCCGACAAATCAATTTGGATAAAAA
AGACTCCTCCAAGAATGACCTTTGGATAACAATGGAAAAAGCTAAAATAG
ATAGAGATGAAGCAAACAGCAAAAGAAGCACACTTGACAAAGaaaaagca
aaagAGCTTTTGGAACATCATTTTGACAAGACAGGCAAAAGAAGTCAAGA
CAATCAGGCTGCCGCAAGTTTGGATGCTTTATCAAAATTGTTGATGAATG
AAGAAAAGAAGTCGGAGAAGCGAGAAGTTGTGTCGGACTTTGGTCGATAC
ATCCCACCGGAAAAATGCAATGACCAGAGATCTGATTGTCATACCTACAA
AGAATATTGTGAGACACCAGAATACCGTCTAATGATGAGAGAACGATGTC
CTTTCACCTGTGGTGCTTGCATGAAATGTTTACCAGACAAATGGCCAGCC
AAGTATTGCAAACGTATCGTAAAGTTGGCAATGTGCAATGTCGATCGTTT
CAAAGATCGCATCAGAGAAAACTGCTTCGATTCATGTGGATTCTGCAGAG
CTAACGCACCACCAGCTTGCTCATTTGACCCTGAAGGATGTTGTTGGGAT
GGCAAACGATTCGCCAAAGATGGATGCAGAAATTGTGCAGATaataaaca
aattaaaaacataTGCGAGAGATTAAAAATGGAATGCACGAACAAATATT
CACCAGGGAAATATATGAAAGAACATTGTCCTGTCACGTGCGGATTCTGT
AatcCAAAAAAGGAATGCCATGACACCTTCAGGTTCAGAAAAGAATGTAA
AACATGGGCTGCCAAGGGAGAATGTGAAGTTGGAGCAACAAAATCCATTT
GTCCACGCTCTTGCAATGCATGTGCCGATCaaaagaaccagtgaATGTTA
TACGGTAGTTACCAAGTAAATAGACgtttcgaacctttttttaaatatca
ttttgattttagagTAAAATATACATACATACAAGAGCTGGATTCTCAGA
GAAAATCATCGAAGATGAAGTTGTTCgcattcatttgttttttatcattG
GCACATGCACTCTCTAAAAACGAAATCGAAAACATTCGCAAAGAACTCAA
TGCTGAGTTGACACAGTTAGAAGATGAAAATACGAAAAGGGCGAACAATC
AGGTGGCTTCTGTTGTCAAGAGCGACCAAGATGTTGAAATAGACGCGCTT
CTTCGTCAACTAACGAAAAAGGAGAAAGCTGATGGATCAAAAGACATTCT
CCGACAAATCAATTTGGATAAAAAAGACTCCTCCAAGAATGACCTTTGGA
TAACAATGGAAAAAGCTAAAATAGATAGAGATGAAGCAAACAGCAAAAGA
AGCACACTTGACAAAGaaaaagcaaaagAGCTTTTGGAACATCATTTTGA
CAAGACAGGCAAAAGAAGTCAAGACAATCAGGCTGCCGCAAGTTTGGATG
CTTTATCAAAATTGTTGATGAATGAAGAAAAGAAGTCGGAGAAGCGAGAA
GTTGTGTCGGACTTTGGTCGATACATCCCACCGGAAAAATGCAATGACCA
GAGATCTGATTGTCATACCTACAAAGAATATTGTGAGACACCAGAATACC
GTCTAATGATGAGAGAACGATGTCCTTTCACCTGTGGTGCTTGCATGAAA
TGTTTACCAGACAAATGGCCAGCCAAGTATTGCAAACGTATCGTAAAGTT
GGCAATGTGCAATGTCGATCGTTTCAAAGATCGCATCAGAGAAAACTGCT
TCGATTCATGTGGATTCTGCAGAGCTAACGCACCACCAGCTTGCTCATTT
GACCCTGAAGGATGTTGTTGGGATGGCAAACGATTCGCCAAAGATGGATG
CAGAAATTGTGCAGATaataaacaaattaaaaacataTGCGAGAGATTAA
AAATGGAATGCACGAACAAATATTCACCAGGGAAATATATGAAAGAACAT
TGTCCTGTCACGTGCGGATTCTGTAatcCAAAAAAGGAATGCCATGACAC
CTTCAGGTTCAGAAAAGAATGTAAAACATGGGCTGCCAAGGGAGAATGTG
AAGTTGGAGCAACAAAATCCATTTGTCCACGCTCTTGCAATGCATGTGCC
GATCaaaagaaccagtgaATGTTATACGGTAGTTACCAAGTAAATAGACg
tttcgaacctttttttaaatatcattttgattttagagTAAAATATACAT
ACATACAAGAGCTGGATTCTCAGAGAAAATCATCGAAGATGAAGTTGTTC
gcattcatttgttttttatcattGGCACATGCACTCTCTAAAAACGAAAT
CGAAAACATTCGCAAAGAACTCAATGCTGAGTTGACACAGTTAGAAGATG
AAAATACGAAAAGGGCGAACAATCAGGTGGCTTCTGTTGTCAAGAGCGAC
CAAGATGTTGAAATAGACGCGCTTCTTCGTCAACTAACGAAAAAGGAGAA
AGCTGATGGATCAAAAGACATTCTCCGACAAATCAATTTGGATAAAAAAG
ACTCCTCCAAGAATGACCTTTGGATAACAATGGAAAAAGCTAAAATAGAT
AGAGATGAAGCAAACAGCAAAAGAAGCACACTTGACAAAGaaaaagcaaa
agAGCTTTTGGAACATCATTTTGACAAGACAGGCAAAAGAAGTCAAGACA
ATCAGGCTGCCGCAAGTTTGGATGCTTTATCAAAATTGTTGATGAATGAA
GAAAAGAAGTCGGAGAAGCGAGAAGTTGTGTCGGACTTTGGTCGATACAT
CCCACCGGAAAAATGCAATGACCAGAGATCTGATTGTCATACCTACAAAG
AATATTGTGAGACACCAGAATACCGTCTAATGATGAGAGAACGATGTCCT
TTCACCTGTGGTGCTTGCATGAAATGTTTACCAGACAAATGGCCAGCCAA
GTATTGCAAACGTATCGTAAAGTTGGCAATGTGCAATGTCGATCGTTTCA
AAGATCGCATCAGAGAAAACTGCTTCGATTCATGTGGATTCTGCAGAGCT
AACGCACCACCAGCTTGCTCATTTGACCCTGAAGGATGTTGTTGGGATGG
CAAACGATTCGCCAAAGATGGATGCAGAAATTGTGCAGATaataaacaaa
ttaaaaacataTGCGAGAGATTAAAAATGGAATGCACGAACAAATATTCA
CCAGGGAAATATATGAAAGAACATTGTCCTGTCACGTGCGGATTCTGTAa
tcCAAAAAAGGAATGCCATGACACCTTCAGGTTCAGAAAAGAATGTAAAA
CATGGGCTGCCAAGGGAGAATGTGAAGTTGGAGCAACAAAATCCATTTGT
CCACGCTCTTGCAATGCATGTGCCGATCaaaagaaccagtgaATGTTATA
CGGTAGTTACCAAGTAAATAGACgtttcgaacctttttttaaatatcatt
ttgattttagagTAAAATATACATACATACAAGAGCTGGATTCTCAGAGA
AAATCATCGAAGATGAAGTTGTTCgcattcatttgttttttatcattGGC
ACATGCACTCTCTAAAAACGAAATCGAAAACATTCGCAAAGAACTCAATG
CTGAGTTGACACAGTTAGAAGATGAAAATACGAAAAGGGCGAACAATCAG
GTGGCTTCTGTTGTCAAGAGCGACCAAGATGTTGAAATAGACGCGCTTCT
TCGTCAACTAACGAAAAAGGAGAAAGCTGATGGATCAAAAGACATTCTCC
GACAAATCAATTTGGATAAAAAAGACTCCTCCAAGAATGACCTTTGGATA
ACAATGGAAAAAGCTAAAATAGATAGAGATGAAGCAAACAGCAAAAGAAG
CACACTTGACAAAGaaaaagcaaaagAGCTTTTGGAACATCATTTTGACA
AGACAGGCAAAAGAAGTCAAGACAATCAGGCTGCCGCAAGTTTGGATGCT
TTATCAAAATTGTTGATGAATGAAGAAAAGAAGTCGGAGAAGCGAGAAGT
TGTGTCGGACTTTGGTCGATACATCCCACCGGAAAAATGCAATGACCAGA
GATCTGATTGTCATACCTACAAAGAATATTGTGAGACACCAGAATACCGT
CTAATGATGAGAGAACGATGTCCTTTCACCTGTGGTGCTTGCATGAAATG
TTTACCAGACAAATGGCCAGCCAAGTATTGCAAACGTATCGTAAAGTTGG
CAATGTGCAATGTCGATCGTTTCAAAGATCGCATCAGAGAAAACTGCTTC
GATTCATGTGGATTCTGCAGAGCTAACGCACCACCAGCTTGCTCATTTGA
CCCTGAAGGATGTTGTTGGGATGGCAAACGATTCGCCAAAGATGGATGCA
GAAATTGTGCAGATaataaacaaattaaaaacataTGCGAGAGATTAAAA
ATGGAATGCACGAACAAATATTCACCAGGGAAATATATGAAAGAACATTG
TCCTGTCACGTGCGGATTCTGTAatcCAAAAAAGGAATGCCATGACACCT
TCAGGTTCAGAAAAGAATGTAAAACATGGGCTGCCAAGGGAGAATGTGAA
GTTGGAGCAACAAAATCCATTTGTCCACGCTCTTGCAATGCATGTGCCGA
TCaaaagaaccagtgaATGTTATACGGTAGTTACCAAGTAAATAGACgtt
tcgaacctttttttaaatatcattttgattttagagTAAAATATACATAC
ATACAAGAGCTGGATTCTCAGAGAAAATCATCGAAGATGAAGTTGTTCgc
attcatttgttttttatcattGGCACATGCACTCTCTAAAAACGAAATCG
AAAACATTCGCAAAGAACTCAATGCTGAGTTGACACAGTTAGAAGATGAA
AATACGAAAAGGGCGAACAATCAGGTGGCTTCTGTTGTCAAGAGCGACCA
AGATGTTGAAATAGACGCGCTTCTTCGTCAACTAACGAAAAAGGAGAAAG
CTGATGGATCAAAAGACATTCTCCGACAAATCAATTTGGATAAAAAAGAC
TCCTCCAAGAATGACCTTTGGATAACAATGGAAAAAGCTAAAATAGATAG
AGATGAAGCAAACAGCAAAAGAAGCACACTTGACAAAGaaaaagcaaaag
AGCTTTTGGAACATCATTTTGACAAGACAGGCAAAAGAAGTCAAGACAAT
CAGGCTGCCGCAAGTTTGGATGCTTTATCAAAATTGTTGATGAATGAAGA
AAAGAAGTCGGAGAAGCGAGAAGTTGTGTCGGACTTTGGTCGATACATCC
CACCGGAAAAATGCAATGACCAGAGATCTGATTGTCATACCTACAAAGAA
TATTGTGAGACACCAGAATACCGTCTAATGATGAGAGAACGATGTCCTTT
CACCTGTGGTGCTTGCATGAAATGTTTACCAGACAAATGGCCAGCCAAGT
ATTGCAAACGTATCGTAAAGTTGGCAATGTGCAATGTCGATCGTTTCAAA
GATCGCATCAGAGAAAACTGCTTCGATTCATGTGGATTCTGCAGAGCTAA
CGCACCACCAGCTTGCTCATTTGACCCTGAAGGATGTTGTTGGGATGGCA
AACGATTCGCCAAAGATGGATGCAGAAATTGTGCAGATaataaacaaatt
aaaaacataTGCGAGAGATTAAAAATGGAATGCACGAACAAATATTCACC
AGGGAAATATATGAAAGAACATTGTCCTGTCACGTGCGGATTCTGTAatc
CAAAAAAGGAATGCCATGACACCTTCAGGTTCAGAAAAGAATGTAAAACA
TGGGCTGCCAAGGGAGAATGTGAAGTTGGAGCAACAAAATCCATTTGTCC
ACGCTCTTGCAATGCATGTGCCGATCaaaagaaccagtga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042524XLOC_042524Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068122-proteinTCONS_00068122-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068122-exon-scaffold_48-1491911889:194199..194525TCONS_00068122-exon-scaffold_48-1491911889:194199..194525Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1510915933:194199..194525TCONS_00068122-exon-scaffold_48-1510915933:194199..194525Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1575043694:194199..194525TCONS_00068122-exon-scaffold_48-1575043694:194199..194525Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1491911889:194727..194804TCONS_00068122-exon-scaffold_48-1491911889:194727..194804Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1510915933:194727..194804TCONS_00068122-exon-scaffold_48-1510915933:194727..194804Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1575043694:194727..194804TCONS_00068122-exon-scaffold_48-1575043694:194727..194804Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1491911889:194993..195139TCONS_00068122-exon-scaffold_48-1491911889:194993..195139Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1510915933:194993..195139TCONS_00068122-exon-scaffold_48-1510915933:194993..195139Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1575043694:194993..195139TCONS_00068122-exon-scaffold_48-1575043694:194993..195139Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1491911889:195390..195425TCONS_00068122-exon-scaffold_48-1491911889:195390..195425Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1510915933:195390..195425TCONS_00068122-exon-scaffold_48-1510915933:195390..195425Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1575043694:195390..195425TCONS_00068122-exon-scaffold_48-1575043694:195390..195425Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1491911889:195654..195764TCONS_00068122-exon-scaffold_48-1491911889:195654..195764Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1510915933:195654..195764TCONS_00068122-exon-scaffold_48-1510915933:195654..195764Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1575043694:195654..195764TCONS_00068122-exon-scaffold_48-1575043694:195654..195764Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1491911889:196617..196784TCONS_00068122-exon-scaffold_48-1491911889:196617..196784Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1510915933:196617..196784TCONS_00068122-exon-scaffold_48-1510915933:196617..196784Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1575043694:196617..196784TCONS_00068122-exon-scaffold_48-1575043694:196617..196784Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1491911889:196959..197084TCONS_00068122-exon-scaffold_48-1491911889:196959..197084Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1510915933:196959..197084TCONS_00068122-exon-scaffold_48-1510915933:196959..197084Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1575043694:196959..197084TCONS_00068122-exon-scaffold_48-1575043694:196959..197084Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1491911889:197365..197448TCONS_00068122-exon-scaffold_48-1491911889:197365..197448Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1510915933:197365..197448TCONS_00068122-exon-scaffold_48-1510915933:197365..197448Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1575043694:197365..197448TCONS_00068122-exon-scaffold_48-1575043694:197365..197448Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1491911889:197598..197717TCONS_00068122-exon-scaffold_48-1491911889:197598..197717Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1510915933:197598..197717TCONS_00068122-exon-scaffold_48-1510915933:197598..197717Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1575043694:197598..197717TCONS_00068122-exon-scaffold_48-1575043694:197598..197717Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1491911889:197887..198634TCONS_00068122-exon-scaffold_48-1491911889:197887..198634Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1510915933:197887..198634TCONS_00068122-exon-scaffold_48-1510915933:197887..198634Clytia hemisphaericaexon
TCONS_00068122-exon-scaffold_48-1575043694:197887..198634TCONS_00068122-exon-scaffold_48-1575043694:197887..198634Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_48supercontigscaffold_48:194199..198634 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.143055	0.179359	0.0694177	0.249019	2.06698	2.04714	3.94115	4.08322	2.34212	3.43438	2.77446	1.0344	104.737	109.378	0.71948	0.460777	1.41143	2.83044	307.857	379.142	2.54893	2.42873	2.22605	3.98369	3.40097	4.97395	34.7199	26.9755	6.01097	4.22918
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003582ShKT_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068122 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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