TCONS_00068097 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068097
Unique NameTCONS_00068097
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5010

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068097 ID=TCONS_00068097|Name=TCONS_00068097|organism=Clytia hemisphaerica|type=transcript|length=5010bp
tttagaaaaaaaataagacaaagGCATTGTCAATGGATACAGCTGACAAT
GGCATTACATGAAATTGAAATCCGAATTAGATACGTTCTACAAATTCTAC
ATCAGATTTTGGTTTTGTTATTAAAGGTTGCATTGACTTTGAACGACGAA
TGCATCAACAAAGCTGACTTGAATATCGGTTTAGCTGAGGTCATCTCCAA
AAATCAACATAAAttcaaaagcaagaaaaacattCATGACAATGAAcatt
ataagaaacatttttatgaTAAACGTACTGGACTTTCAAAGACCAGCATC
GAAATTAAAGAATTGGATATTTCAGTGCTGGTGATTTTGgtcaaaacaaa
tttcatttCAAGATCTAAAACATCCGTAAAGTCGTTATTGAAAGAGTTCG
GATGTTGTGTAGATTGTCTCCATCAGTTTTGTGTTTGTGGTATTAACATT
ACCAATGTTCGAAATCACTGCCCCAAGAAAGCTAATTGCAAGTATGGAGA
TTGTAAAAATTCCTGTCCAGCAGTTAACTGTCAACTTGCCACAATTAACA
AGTTTGTGGACGTCGCCAGAGCTTTGAGGAATTCTCTTTCTCATATAACT
GAGGATCTGTGCAAGAAGTTGGCCCTTGGAAATCCAGTATTAGAAGATTT
TCCACTTTCCAATAGCTGGCTTGATATATGGGAAATTGTTAATGGATTAT
CTTTAAATTGTCTAGAGGTTTTGGTGAAAAAGAAGTTCATCACTCAGAAT
GAATTAGAAGATCAAAAGATGGAATTGTGGATTTCTCTTCGTAAATCCAG
TCAATTCTTGTTGCCAGTAGTTGGTGAGAATCTGCAGCATTACCACAATG
TCATCCTTGGTGAACAAACAGCTACAGAGAAATTAGAGCATCTACAGTTG
GCTTTGGAGAACAAAAATAAAGAATTATCAATGGATTATGTATATCTAGA
CGGCAGGTTGTTTGCATTCAATGAAGCCAAAAGAAAAGTCGGGTTGAATC
TGAAATCAATCAGCGAAGATTCGTTAACATTCTCATCAGATCTACCGGTA
ATGCACCAAGAGTCTGCGCTCCAATGTAAATTCAATGTATTCAGTAAATG
GATGAATATGCCAAAAGACTCCTTTGATCTTCAAACAACCAGCAATTTGA
GTGTTGTGTTGAAGAATTTTGATTGTGGTCATTCTAAGATATCACTGAGA
TTGTTGGTGCTCGAGACCAATGGCAATGTTGTTCATTTTGTTCAAGATAA
TCTGGATCTAAGTTCGTTTACTTCCGATCGATTCGTGAAAAGTCTTGGAA
TTATGATTTCAAGTGAAGTGCTGGTTGAAGATTGTTATTATCAGAAGACA
AACTGTGGTCTACTCATATACAATGTTCCGGATGAAGAAGTGAAAGTGGT
TCAAATCAAAAGTGTTAAAGATTCTGAATGGAAGGATGTCAACACTTTTA
AAGTGATCAAAGATGGAAACGTTTAATCGATTGAAGGGCTGGAATGCACA
ACAATGGATGTCCGCTTTGTGACCAGTAATAACGAAAACAATCTGTTCAC
GTCTTACACATTAAATGCTGTCACCGTTGTTGATGTCAATCAACTATCGT
ACGTcaccaatcatcaaaacattttGGTAAATTCTCACCCATTTGGCGTT
CAAACAGACGTTCATCATTTCTTACCAGAAGTTCATTCTTTAGAACCACC
CGTTATTCAGTATCATGGAGGAGCTGGCAAAGTTCGGAAATCCCTGGCTG
AAGCAAAGGATTACCTGGACACGAATTTCACGCCAGAAGAGAAAATCATT
CGCTTTCCACCAAAGTGGAATATCTGTGATACTCCAGAAAGCGTTTCTCA
TGCCTTAGCCGATCGTTTTCAAGAAAGGTTCCAAGAAACATCTTCTGAAC
GTCGTAGAATCCTGTTACCGTTTAATCAATGTTTAAGTCAACAGTATTTA
AGAGATTTTGGATTCTCACTTTGCTCCGAAGAATACCTGATGATTTTCGA
CGGCTCACTGAATTTGATCATTTTATTAGCCGTTTCCAAAGCAACCAACG
AAGCTGGCTTTCACCAAGATCTACAGAATCTGAATTTGAATATGAAAGCT
TTAGTTCGTGTCTGTTCTGACTTGTTGACTAAAGATTGTACAATCGGTGA
ACCTCTAGCAATTGTTGGAGCTGTGTGTTGTCCAACCATCGACGAGAGGG
tattaaaaaagtttcaattatGGCAAGTAGATAACGGAGCGTATTATCGT
AGTAATGTTATCACCAAACGACAGTTTGAAAATCAAGAGGAATTCAACCA
TTGGTATTTCCAGTTGTGCGCAAACATCCACCAAGAATTGAACGGTATCC
GATGTATTTCATTAGACAACCTGTCCCACAATTTCTACCAATATGCTAAT
AGAATGATGATGTTGTTAGCCTTGCAAGACGTGCAACTACCCTCTGTGTT
CGGTTCAACAGACATCAAAATTCGAAGTCTGCTGCTAAACAGGGAGCAAA
TGGAAGCTGTACATTTGGCTTTAGTGAAGAAACACGTTTTTATTACTGGT
CCCTATGGTTCGGGTAAAACGATCACAAGCCAGAAGATTCTGGAGAATGC
TCTTCCAGCACTTGATCCTCTCAAAGATGTCGTTTACTATGTCGTCTTCG
ATCAGTATTCGCTGCTCCAAGTTGAAAGCGAGAAGTATTGCCAAAGGCTG
ACGGAGAGGTTTGgtatcaaaattcaatgtttcgATATCAATGAAGTACC
TTCTAAGCGGCATATAACGGCATATTTGAGCACTTGTCTGCAATATTTGC
TTACAAAAGTTGAAGATGGGCAAAGACTGCACGTGTTTGTTGACGAGTTT
GATACTGAAATGTTATCAAATTTCGAACAATCCTTTCTGGACAGATTCAT
TGACCAATCTCTTTCTCAGTCATTTTTGGTGATTTCAACACAAAGCATTC
GCAAATATCGTTCTTTTAAATCTCCAAAAGTGAAAGCCGCCAGCTTAAAA
ATCTCGACttgtcattttgaaaagctgaaaGAAAGAATCACCTTTATAGA
ACTCGGTAAAATAATGCGCTTGTCAGCCAATATCTTAGCTCTCAATGAAA
TGGCGATAAAGTTTATTGAGAATGTCTCGAATCGTTACCAAGATCCTTCA
ATTCATTTGGCTGAATCTCAGGAGAAAACTGTGAGCCAAGGTGAAATACC
AATGCTTGAAAGTCAATCATCGCAGCAAAATAGTCAACAGCAATCTTCAC
TTTCTCTTCAAACATCTGATCTAGATGTGGTTGATTCTGGAGTGAATGAT
TCAAATTCCAACGCAGCTTTATTTTCCGATGTTGAAGGGTCAATCGATCG
AATCCTTAAGCaaactcaaaacaaaacagactTGGTGACAGAGGAACGTT
TGATATTAGAAACTGAATTCAAGTTTTACGAAAACTCTGGATGTGGTCAT
TTGATAAAAGGGATAAATCCTTCGCTCCTTAGATTACCAACTGGATCAAA
TTTAGCCCTCCTGGCAAGTGCAATTCTGAAAGTAGCTAATCCATTTTGGA
AGagaagtttgtttgtttgtaacGATTTGGAATCTGCAGCAAAGGTGTTT
GAAGCTTCCTTGCTTCTTGGACTTGATGTAATTCCGTACTTTGGAGGATT
GACTTTCACCACGGTGGATTGCCTTGAGAAGCAAAGGATTTATAATACAT
GGATCACTTCAAAGAATTGTGTTTTATTGACTGACAATCGTGGATGTCGC
GGGCTTCAGAACGAACACGTTGTATTGTTTTTGGACGAGGAAGAATCTTG
GGAGCATTACTTATTGCCAGAGATGATTGGGCGTGCTACATCCAATCTCT
CCATCATCACATTCAATCATCAAAACACTAACAAACtaaattcttctttt
gatcaAAATAAAGTTTCAGTCCGTCAAATGGTTGAAACGTTCTCTCAACA
CATGGATACATTCGATGTTCAGCAGTTGAAAGAACTAAAAGTCTGGAGAA
AAATGGAACCCAACTCAGAAAAGTTGTTGGCAAAACTTAAAGACCACAAC
CTGACGAAGGATATTAAGTTGAAAGCAATGGAGGCATGGAATGGTATAGC
AAACAAACAAGTGTTATTAAACAGTGTAGCAGGTGCACCCGCAGACAGaA
AGAACATTGATTCTTTTCTCCGTGCTCGTTATCTGACGGCATACATTGTC
AACAAACATTTCGCCGATACGAGAAGTGAACGATTTGAGAAATTCCCTCT
CGGTGATAAGCTCTATGAAAAAGCAATCCAAATGTATGATACAATAAAGA
TGGAAGATGCTGATTTATATAATAAACTTAAAGGACTTATTCGAGAAAGT
AAAGACATCGTCGGATTTTATCGTTCCATCATAACAACGCATATACTACA
GTTATTACACATAGGGCGCATTGGGATCGTCTTTGTCACCCTTCTGATAT
GTTGTGAATATTTcgaagaaaacatgaaaaacgaTCAGATTGAAAGATTA
ATAGAAGTCAATGCTTGTGTTTTATCGCATTATCAAGACTGGATTGAGGA
TAATATATTTCATAACAAGGTTGACGTCACCGATGGAGAAGGAAGCTCCA
CTGTATTCACAGCAAGCGCCTTAGCGGGTATTCTACTTGGCGCCATAtat
atgctaaaatagaaaattaggAGCTATGGATGTCTGTAGTAAACGTCTAG
CATGTTTTTTCTAGTTGTTTATTTGATATTGGAACGATATGGATTCAACT
CTGTCGACGCAATAACTCGAATGACAATTGATGATAGTCAGTTTAGTATT
CCGTCATATCttaacatcaattttttttttaccatcTGCCTTTTTCAGCT
CAGgaaaatttggtttttaaaaaTGGGATAGTTTGGTACGTTCTcagtaa
atttttgttaatGTCCGGCTGTACTATTTTTTTAGCCTTTTTAAcattaa
attattattatttttatctcGTTTCTTATCTTCAGGGCAAGATGGGGTAC
TGTATTTCAG
Run BLAST on NCBI

transcript from alignment at scaffold_48:66755..77552+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068097 ID=TCONS_00068097|Name=TCONS_00068097|organism=Clytia hemisphaerica|type=transcript|length=10798bp|location=Sequence derived from alignment at scaffold_48:66755..77552+ (Clytia hemisphaerica)
tttagaaaaaaaataagacaaagGCATTGTCAATGGATACAGCTGACAAT
GGCATTACATGAAATTGAAATCCGAATTAGATACGTTCTACAAATTCTAC
ATCAGATTTTGGTTTTGTTATTAAAGGTTGCATTGACTTTGAACGACGAA
TGCATCAACAAAGCTGACTTGAATATCGGTTTAGCTGAGGTCATCTCCAA
AAATCAACATAAAttcaaaagcaagaaaaacattCATGACAATGAAcatt
ataagaaacatttttatgaTAAACGTACTGGACTTTCAAAGACCAGCATC
GAAATTAAAGAATTGGATATTTCAGTGCTGGTGATTTTGgtcaaaacaaa
tttcatttCAAGATCTAAAACATCCGTAAAGTCGTTATTGAAAGAGTTCG
GATGTTGTGTAGATTGTCTCCATCAGTTTTGTGTTTGTGGTATTAACATT
ACCAATGTTCGAAATCACTGCCCCAAGAAAGCTAATTGCAAGTATGGAGA
TTGTAAAAATTCCTGTCCAGCAGTTAACTGTCAACTTGCCACAATTAACA
AGTTTGTGGACGTCGCCAGAGCTTTGAGGAATTCTCTTTCTCATATAACT
GAGGATCTGTGCAAGAAGTTGGCCCTTGGAAATCCAGTATTAGAAGATTT
TCCACTTTCCAATAGCTGGCTTGATATATGGGAAATTGTTAATGGATTAT
CTTTAAATTGTCTAGAGGTTTTGGTGAAAAAGAAGTTCATCACTCAGAAT
GAATTAGAAGATCAAAAGATGGAATTGTGGATTTCTCTTCGTAAATCCAG
TCAATTCTTGTTGCCAGTAGTTGGTGAGAATCTGCAGCATTACCACAATG
TCATCCTTGGTGAACAAACAGCTACAGAGAAATTAGAGCATCTACAGTTG
GCTTTGGAGAACAAAAATAAAGGTAGAGTGCTATTCCATGAATCAAACAT
GGGGTCAGGgttttttcaagcactttttaACCGCTGTTATTCGGTGGCAA
ATACTCCAAATTTGAAAGTTAAATGATTCAAGGTAGAGAAACCCAACCAT
CTTGTGCTACATTTGTGCCATTGCATTTGAAACTCAATTTTCTGGACGAA
AAATGTGGTAATATTGGGGATATTTTTTGATATACTGCTTAAagcatatt
tttggaaatttgctacacggaaaaaaacattttgattttcttttctccTA
TAGAATTATCAATGGATTATGTATATCTAGACGGCAGGTTGTTTGCATTC
AATGAAGCCAAAAGAAAAGTCGGGTTTGTCATGTTAATTTCAGTATTATC
AATATTATGAAAAAGTGAGGGATAATTATACTTCAGAAGAACACTAAACA
CGTTTCTTGAATTTTTGAGAACCTTAAAGTGATTCTTCTTTTTCAGGTTG
AATCTGAAATCAATCAGCGAAGATTCGTTAACATTCTCATCAGATCTACC
GGTAATGCACCAAGAGTCTGCGCTCCAATGTAAATTCAATGTATTCAGTA
AATGGATGAATATGCCAAAAGACTCCTTTGATCTTCAAACAACCAGCAAT
TTGAGTGTTGTGTTGAAGAATTTTGATTGTGGTCATTCTAAGATATCACT
GAGATTGTTGGTGCTCGAGACCAATGGCAATGTTGTTCATTTTGTTCAAG
ATAATCTGGATCTAAGTAAGTCAGATGCTTATCgatctttatttaaaaaa
aatgacagctcttttaatttttgttaaTGAAATTGGAAAGAGTTGGCAGA
AAGTATTTGCTTTTTACGCTTGCTCGACATGAGTAGGGTTTTATTAATTT
GAAAAAGGTCTTCTTCTCCAATATTGAGCAGTACTGCCAAATTCATTAAT
TAAAGCTTAACGTGCACTGCATCTTCTTTCAGGTTCGTTTACTTCCGATC
GATTCGTGAAAAGTCTTGGAATTATGATTTCAAGTGAAGTGCTGTAAGAC
CTTTTCTCAGTCGTCGATTTCtattctttttatcattttatgcACGTGTA
CTTATCTCTGTAAcacttttttggacctactttTACGagggtcctttaaa
ttaacctatttatgtccgtccgtccgtctgagaaaagctaataattGGCG
CACtcgatttttctgattttttgctaaatgatgcaaaatggtaattccca
atattgatattttttacttAATTATTAGGTTTTCTGGGGATTGGCGCACt
cgatttttctgattttttgctaaatgatgcaaaatggtaattcccaatat
tgatattttttacttaattattagcttttctcgagattgggtcattcatt
ctttatgactttttgcacaaaggtgcataaCTATAACGCCCTTGAATATA
AAgcccgattttctgaaaaaatttggTGGATGGGGGGGGGCAAACTCCAG
CTAAAAACggcttttttagattttgtagaaaactggatcattaatttttc
ctgattttctgCATGAAAGTTACAAGCATTGGTAAAAGATAGCTGAAGCA
AATTgttacgaaaaaaaaatttcaccttATAAAAATTGAATCTTTATCCA
TAAGACTGCATAAAAATCGCTATTTATAAGCTTAGATCAATGTTCCTAAc
caaattactcaaattttaGATGAGATAGATTTTCTCCTccttccaacccc
ccccccttaatacaagggacctttagcatctaggacggcgacttgaatga
ggacgtaaagtaaatcttaaaatcaaatgGCAAATTTGATCCGATTTTAC
ATCGATTTAATATCGCATGGAAAAATTTGAGTTTAGGAAATATATATTAA
ATATAATTTAAAACTATTGTGCTTTTGTTTTACCGCCTTCGTCCCAAAGA
CGatgtcaaaaaagaattttcatgtCGTCTTGAGATTTGGAAACGTCCAT
TAATTACCctattaaaattcacttttctcatgagaaatttgatatgaaaa
gaATAGAACCTAGCTGCAATCCTTATATCAATCCCCTAGGGGCTTTCTTT
TGTTCAATCCTGCGGTACTTTTTCAAAGTCGTCCTCAATACTAAAGGTCA
CTACCACCCCAATGGGTACGGGGTACAGACAGTCAATGATGAAAACAAAC
GAAGAGTTTTAATAAATCGtgactatttgtgttctgaatgattgtttcaa
cggtcatgctcacatagatatcaattatatattttaaataaataatCAGG
TAGCTCcgccataaaagtatcgcttgtttctCTACAACTCGTTGCttcat
tttgatatttctaaGGGTTGAAGATTGTTATTATCAGAAGACAAACTGTG
GTCTACTCATATACAATGTTCCGGATGAAGAAGTGAAAGTGGTTCAAATC
AAAAGTGTTAAAGATTCTGAATGGAAGGATGTCAACACTTTTAAAGTGAT
CAAAGATGGAAACGTTTAATCGATTGAAGGGCTGGAATGCACAACAATGG
ATGTCCGCTTTGTGACCAGTAATAACGAAAACAATCTGTTCACGTCTTAC
ACATTAAATGCTGTCACCGTTGTTGGTTAGTCTAATTCCAAAAATGAACT
TCTTTCTTATTTCTAATATGATTTTTAAGAATGAGAATCAATCATGTCTT
CGTTTTCGTTATGTTCATTGTTGGCGTCTCCAGCAACTTATTATAGAATT
CAAATCAATTCTTTTTTGGTTTTCTCTCTCGTTTTTCAGATGTCAATCAA
CTATCGTACGTcaccaatcatcaaaacattttGGTAAATTCTCACCCATT
TGGCGTTCAAACAGACGTTCATCATTTCTTACCAGAAGTTCATTCTTTAG
AACCACCCGTTATTCAGTATCATGGAGGAGCTGGCAAAGTTCGGAAATCC
CTGGCTGAAGCAAAGGATTACCTGGACACGAATTTCACGCCAGAAGAGAA
AATCATTCGCTTTCCACCAAAGTGGAATATCTGTGATACTCCAGAAAGCG
TTTCTCATGCCTTAGCCGATCGTTTTCAAGAAAGGTTCCAAGAAACATCT
TCTGAACGTCGTAGAATCCTGTTACCGTTTAATCAATGTTTAAGTCAACA
GTATTTAAGAGATTTTGGATTCTCACTTTGCTCCGAAGAATACCTGATGA
TTTTCGACGGCTCACTGAATTTGATCATTTTATTAGCCGTTTCCAAAGCA
ACCAACGAAGCTGGCTTTCACCAAGATCTACAGAATCTGAATTTGAATAT
GAAAGCTTTAGTTCGTGTCTGTTCTGACTTGTTGACTAAAGATTGTACAA
TCGGTGAACCTCTAGCAATTGTTGGAGCTGTGTGTTGTCCAACCATCGAC
GAGAGGGtattaaaaaagtttcaattatGGCAAGTAGATAACGGAGCGTA
TTATCGTAGTAATGTTATCACCAAACGACAGTTTGAAAATCAAGAGGAAT
TCAACCATTGGTATTTCCAGGTACAGTTGTTGAAATTATTTGAGACTTCA
AAGAAGTAGAATCCGGGCGAATGAAAGAATTTAGTAATCCTGTAGTTGTT
AAGTTCAATACTATTAGCGAGGTTATATAATATGATGCTATTAACGACGT
ACAGGATCTATGACGCGACCTTTTGCTGGCTATCTGTGGCATAGATTTTG
ATAAGgaactgaaaaagatttttgctaAGGGATCAGGCTGAGTCGGTTAG
GTTGTAACTCAAATCTTGCGTCGTAAATAACTTTATGCTTAACTTCGTTA
ACttgttttattcaaaattctaaAACAGTTAGTTTTACTTAAGTTACTCT
CCCACCCTATATATCTGATGGTTATTATATCTTTGTTTTAGTTGTGCGCA
AACATCCACCAAGAATTGAACGGTATCCGATGTATTTCATTAGACAACCT
GTCCCACAATTTCTACCAATATGCTAATAGAATGATGATGTTGTTAGCCT
TGCAAGACGTGCAACTACCCTCTGTGTTCGGTTCAACAGACATCAAAATT
CGAAGTCTGCTGCTAAACAGGGAGCAAATGGAAGCTGTACATTTGGCTTT
AGTGAAGAAACACGTTTTTATTACTGGTACGAGTGCAGATAACGGTCATC
AGGATTCCAGTTTAAATACTAACCCCGAAATTTTCCCTCGTTTCTTATAT
TTTAAAATTCCAATAACAATTATGGAATGATTGATGTCAAAATATATGTC
TGATATCAGTTGGCTGTTCCGAGTTGATCTTTATAGCTTAATATAAGCAA
GTatacttttgcaaaatttggGGTCCTTCTTTTGATTTGAGCCTTTAGCA
ACAGCTAATTAAGATGGTTATCGTATCTATCCAAAAATGAAGTAAATTCT
CTTTTGGTACTTAGGTCCCTATGGTTCGGGTAAAACGATCACAAGCCAGA
AGATTCTGGAGAATGCTCTTCCAGCACTTGATCCTCTCAAAGATGTCGTT
TACTATGTCGTCTTCGATCAGTATTCGCTGCTCCAAGTTGAAAGCGAGGT
CAGTACTTTTTTTTGTCTTctatctttttggacctaccttggaggtccta
taaattaaccgatgtccgtccgttcgttcgttcgtccgtctgttaccagc
ttttctcgagattggctcattagttttttctgatttttggcacaatgatg
caaaatggtaatgcccaaaatgtgacggagcccgatcttcgaaaaaaaat
catttccggccgaaaatgccggaaatatgccggaaaacccggttttttgg
cattttctcaagattccatcattagttttttctgattttttgcacaaaga
tgcgtattagcaatgcccaaaacttggccNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattg
cagattttcatcggactttttccttataattggttgttttttcacacaaa
aacattgttaatagcaatgcccaccatcaagcatgtttcaattgtcatta
aaactgatttttgaagccggaactttctaaaaatcgccggaacagcctat
ttttgccggaaagacagtatttcttgaatttctcgagctgtactttatat
ttttttatgaaattttgcacactgatgcaatatgacaatacctaaaatgt
gacggagcccgattttagaaaaacattctttttctggccgaaaatgccgg
aaatatgccggagaACCggttattttacattttttcgaattttcatcaaa
tgttttttctgatttttttctgatgcgtattcgcaatgctcaaaaaatgg
ctgagttcgatttttgagaaatttttttttcggttgaaaatgccggaaat
cgccgtttttgcagattttcattaaattttttccttgtatttctatgttt
tttcacacaaaacattattgataacaatgctcacgatcaagcatgattca
attgtcaatgaaactgatttttgcgaccagaactttctatttatttttcc
cctacaacccttccctctccccccatcaacaatcaatgatgaattttttg
tgttatgcattttcgctaaacgctacattttttgactgatttttttctcc
tcgcattgcgatccaactttcatcatcaggtaggtccattcagcatctat
cTTGTCTATTCTACAGTAGAACCTCCAAAAGCCAAGACTTTAAATGGCGg
acacctctaattagcggacaaaGTATCTTTGCCGGGTCATCTTCTGGTCA
AATAATATAGAAAGGTTTGAGAAGGCGGACAGCTGGACACCTTTCCTAAG
CGGAAAAAGATTTTGCACCTATTTGCACCTATTATTTCTCTCCAATTGGA
TAGAGAGGTCAAAACTCATGAAAATATTTGTCTTGAATTCAATGTTTTCG
TAAAAAAGTATGTTTTAATCAAGGACAAGTATGTAAGTTAAAACAGCTAT
CTTCGCTACTTAATACTCAATGAAATTTCCCATTTCCTTTGCAGAAGTAT
TGCCAAAGGCTGACGGAGAGGTTTGgtatcaaaattcaatgtttcgATAT
CAATGAAGTACCTTCTAAGCGGCATATAACGGCATATTTGAGCACTTGTC
TGCAATATTTGCTTACAAAAGTTGAAGATGGGCAAAGACTGCACGTGTTT
GTTGACGAGTTTGATACTGAAATGTTATCAAATTTCGAACAATCCTTTCT
GGACAGATTCATTGACCAATCTCTTTCTCAGTCATTTTTGGTGATTTCAA
CACAAAGCATTCGCAAATATCGTTCTTTTAAATCTCCAAAAGTGAAAGCC
GCCAGCTTAAAAATCTCGACttgtcattttgaaaagctgaaaGAAAGAAT
CACCTTTATAGAACTCGGTAAAATAATGCGCTTGTCAGCCAATATCTTAG
CTCTCAATGAAATGGCGATAAAGTTTATTGAGAATGTCTCGAATCGTTAC
CAAGATCCTTCAATTCATTTGGCTGAATCTCAGGAGAAAACTGTGAGCCA
AGGTGAAATACCAATGCTTGAAAGTCAATCATCGCAGCAAAATAGTCAAC
AGCAATCTTCACTTTCTCTTCAAACATCTGATCTAGATGTGGTTGATTCT
GGAGTGAATGATTCAAATTCCAACGCAGCTTTATTTTCCGATGTTGAAGG
GTCAATCGATCGAATCCTTAAGCaaactcaaaacaaaacagactTGGTGA
CAGAGGAACGTTTGATATTAGAAACTGAATTCAAGTTTTACGAAAACTCT
GGATGTGGTCATTTGATAAAAGGGATAAATCCTTCGCTCCTTAGATTACC
AACTGGATCAAATTTAGCCCTCCTGGCAAGTGCAATTCTGAAAGTAGCTA
ATCCATTTTGGAAGagaagtttgtttgtttgtaacGATTTGGAATCTGCA
GCAAAGGTGTTTGAAGCTTCCTTGCTTCTTGGACTTGATGTAATTCCGTA
CTTTGGAGGATTGACTTTCACCACGGTGGATTGCCTTGAGAAGCAAAGGA
TTTATAATACATGGATCACTTCAAAGAATTGTGTTTTATTGACTGACAAT
CGTGGATGTCGCGGGCTTCAGAACGAACACGTAATCAGTTCTATTAATGT
TCAATTTGTCATCCCCAGATTGACAAAATATATATTTAGGCAAAAAGGAG
TCGGTAGCTTTTCTTACCTTTAACTTTATGATGGAAGCAGAAAATGCTGG
GGAaacttttaatttcatttaggatcacttttttgcaacatttaaaaaaa
agaatcccACGTAGGGTCAATTCTATAACCTCTGCAGCACACCCTCTTCA
GCACTGAAAAAGTCCATTCGCTTTGACATGACAGCAGAGAAGAGTGCTTG
CTTAAAGCGAATGAACTTTTTATGTATATATACCAACGAAGTAACATGGG
AATTGCCCCATAATTATGGTACAGTATCATAATTATATATGTTTATTTTT
AGGTTGTATTGTTTTTGGACGAGGAAGAATCTTGGGAGCATTACTTATTG
CCAGAGATGATTGGGCGTGCTACATCCAATCTCTCCATCATCACATTCAA
TCATCAAAACACTAACAAACtaaattcttcttttgatcaAAATAAAGTTT
CAGTCCGTCAAATGGTTGAAACGTTCTCTCAACACATGGATACATTCGAT
GTTCAGCAGTTGAAAGAACTAAAAGTCTGGAGAAAAATGGAACCCAACTC
AGAAAAGTTGTTGGCAAAACTTAAAGACCACAACCTGACGAAGGATATTA
AGTAAGTCAATAATTGGTTTACTCTTTCAGGGcaacgaaaattgaaaaaa
tagatttttttcgtttttagaaGTTCCAACTTCAGATGCAATTATCTCAG
CTTTGGAGCAATCTAAAGATCTAAATAGGTCATTTTTGggttcgttggaa
agctctttttatcttttatccTTTCAGCgtcccaaatttctaaattagGT
CTTCAAAAAAAGTTACGGCAGCCGAAAAGTATCGTTCCAAATGGAACGAA
ATTAGCTGGGGCCGTCCTGAAAGAGTTAAACGTTCCTAGACAtaacatga
aaaaaaatcttcgaaaattGGCAAAAGACTTTTGGTCCGAAACATAAGAG
GTACAAAATGTTTGTGTATCGGTTATTCTCATATTTTCCTGTGGTTGGCT
TAGCAAGTGCTCAGAAAAAAATGCCACATGTCATTCCTCTAAAACAAGAA
GAGTGCAAGAATGTAGGTAGATATTTATAAGCACTTTAACGGGCCATTGG
GCTTGCCACGATGTTCGGGCTCCGCTGACCATTGCTCTTTCAATGTCCTC
GAGTGTTATGCTCATGTTCATTTatttatcttctttttcaagGTTGAAAG
CAATGGAGGCATGGAATGGTATAGCAAACAAACAAGTGTTATTAAACAGT
GTAGCAGGTGCACCCGCAGACAGGTGTGTATAAAACCGTCAGTTGAAATG
AAGGTGAACAGAAGTTTAAAACAAAACCGCTTTCCGCTTTCGATTTTAAG
TTTTGGCGAAAACACAAAATCTCGCTAAATTCACCAAGTCTAGATTAGTG
CCAAGACTAGTTCCCTAAAAGTACGCTGGAGAATTACCGAGattgaaaat
cttcttttttttctctcttttagaAAGAACATTGATTCTTTTCTCCGTGC
TCGTTATCTGACGGCATACATTGTCAACAAACATTTCGCCGATACGAGAA
GTGAACGATTTGAGAAATTCCCTCTCGGTGATAAGCTCTATGAAAAAGCA
ATCCAAATGTATGATACAATAAAGATGGAAGATGCTGATTTATATAATAA
ACTTAAAGGACTTATTCGAGAAAGTAAAGACATCGTCGGATTTTATCGTT
CCATCATAACAACGCATATACTACAGTTATTACACATAGGGCGCATTGGG
ATCGTCTTTGTCACCCTTCTGATATGTTGTGAATATTTcgaagaaaacat
gaaaaacgaTCAGATTGAAAGATTAATAGAAGTCAATGCTTGTGTTTTAT
CGCATTATCAAGACTGGATTGAGGATAATATATTTCATAACAAGGTAAAA
CTTCATAATGTGTTGTTGTTGACCTGACCGattatttgatgaatttttga
cTGGAATAACCTGGTTCTCTTTATGTATGACAGTAGTCTCTTTGAGGTTT
GAAGCCACTTTTTTCCTTTATAAGTTGCGCAGCCTACCTGGTTTATTCCA
AAAGCTAGATTGAAAGGTAGACCAGAGTTTCAatgattgatttaaaatta
tttatagGTTGACGTCACCGATGGAGAAGGAAGCTCCACTGTATTCACAG
CAAGCGCCTTAGCGGGTATTCTACTTGGCGCCATAtatatgctaaaatag
aaaattaggAGCTATGGATGTCTGTAGTAAACGTCTAGCATGTTTTTTCT
AGTTGTTTATTTGATATTGGAACGATATGGATTCAACTCTGTCGACGCAA
TAACTCGAATGACAATTGATGATAGTCAGTTTAGTATTCCGTCATATCtt
aacatcaattttttttttaccatcTGCCTTTTTCAGCTCAGgaaaatttg
gtttttaaaaaTGGGATAGTTTGGTACGTTCTcagtaaatttttgttaat
GTCCGGCTGTACTATTTTTTTAGCCTTTTTAAcattaaattattattatt
tttatctcGTTTCTTATCTTCAGGGCAAGATGGGGTACTGTATTTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042519XLOC_042519Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068097-exon-scaffold_48-1491911889:66755..67676TCONS_00068097-exon-scaffold_48-1491911889:66755..67676Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1510915933:66755..67676TCONS_00068097-exon-scaffold_48-1510915933:66755..67676Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1575043694:66755..67676TCONS_00068097-exon-scaffold_48-1575043694:66755..67676Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1491911889:67958..68027TCONS_00068097-exon-scaffold_48-1491911889:67958..68027Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1510915933:67958..68027TCONS_00068097-exon-scaffold_48-1510915933:67958..68027Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1575043694:67958..68027TCONS_00068097-exon-scaffold_48-1575043694:67958..68027Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1491911889:68151..68419TCONS_00068097-exon-scaffold_48-1491911889:68151..68419Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1510915933:68151..68419TCONS_00068097-exon-scaffold_48-1510915933:68151..68419Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1575043694:68151..68419TCONS_00068097-exon-scaffold_48-1575043694:68151..68419Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1491911889:68637..68697TCONS_00068097-exon-scaffold_48-1491911889:68637..68697Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1510915933:68637..68697TCONS_00068097-exon-scaffold_48-1510915933:68637..68697Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1575043694:68637..68697TCONS_00068097-exon-scaffold_48-1575043694:68637..68697Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1491911889:70020..70279TCONS_00068097-exon-scaffold_48-1491911889:70020..70279Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1510915933:70020..70279TCONS_00068097-exon-scaffold_48-1510915933:70020..70279Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1575043694:70020..70279TCONS_00068097-exon-scaffold_48-1575043694:70020..70279Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1491911889:70444..71174TCONS_00068097-exon-scaffold_48-1491911889:70444..71174Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1510915933:70444..71174TCONS_00068097-exon-scaffold_48-1510915933:70444..71174Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1575043694:70444..71174TCONS_00068097-exon-scaffold_48-1575043694:70444..71174Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1491911889:71546..71780TCONS_00068097-exon-scaffold_48-1491911889:71546..71780Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1510915933:71546..71780TCONS_00068097-exon-scaffold_48-1510915933:71546..71780Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1575043694:71546..71780TCONS_00068097-exon-scaffold_48-1575043694:71546..71780Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1491911889:72069..72202TCONS_00068097-exon-scaffold_48-1491911889:72069..72202Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1510915933:72069..72202TCONS_00068097-exon-scaffold_48-1510915933:72069..72202Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1575043694:72069..72202TCONS_00068097-exon-scaffold_48-1575043694:72069..72202Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1491911889:73849..74934TCONS_00068097-exon-scaffold_48-1491911889:73849..74934Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1510915933:73849..74934TCONS_00068097-exon-scaffold_48-1510915933:73849..74934Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1575043694:73849..74934TCONS_00068097-exon-scaffold_48-1575043694:73849..74934Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1491911889:75307..75605TCONS_00068097-exon-scaffold_48-1491911889:75307..75605Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1510915933:75307..75605TCONS_00068097-exon-scaffold_48-1510915933:75307..75605Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1575043694:75307..75605TCONS_00068097-exon-scaffold_48-1575043694:75307..75605Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1491911889:76197..76277TCONS_00068097-exon-scaffold_48-1491911889:76197..76277Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1510915933:76197..76277TCONS_00068097-exon-scaffold_48-1510915933:76197..76277Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1575043694:76197..76277TCONS_00068097-exon-scaffold_48-1575043694:76197..76277Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1491911889:76478..76898TCONS_00068097-exon-scaffold_48-1491911889:76478..76898Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1510915933:76478..76898TCONS_00068097-exon-scaffold_48-1510915933:76478..76898Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1575043694:76478..76898TCONS_00068097-exon-scaffold_48-1575043694:76478..76898Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1491911889:77112..77552TCONS_00068097-exon-scaffold_48-1491911889:77112..77552Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1510915933:77112..77552TCONS_00068097-exon-scaffold_48-1510915933:77112..77552Clytia hemisphaericaexon
TCONS_00068097-exon-scaffold_48-1575043694:77112..77552TCONS_00068097-exon-scaffold_48-1575043694:77112..77552Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_48supercontigscaffold_48:66755..77552 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.83523	3.1834	1.60645	1.00893	10.6928	6.5547	7.76589	8.27419	6.04654	7.69787	6.89058	5.50713	5.55844	4.39445	6.84085	8.38017	7.51916	9.58642	5.55617	7.57891	7.59486	8.55208	5.97302	6.82374	6.03055	6.16104	7.75953	7.47355	5.72238	7.86086
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068097 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top