TCONS_00068083 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068083
Unique NameTCONS_00068083
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2141

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068083 ID=TCONS_00068083|Name=TCONS_00068083|organism=Clytia hemisphaerica|type=transcript|length=2141bp
aaacaaagtaaataaaaggagacTGTGCAGAATTTATTGAtgattctttt
taaacaaaaatgaaagaacCCAACAGGAAATGATGCCTTGGTTTTATGGA
GGAATGGAGAATGTGATTAATCGTTAAAGTGACAGTTGATTAATGTCTTG
AAGAAGTTTAAAAAACATGCAATAACAACCATACCTTCTTCATAATTTGT
TACTACCAGTTAAAGACGATAAAGCTCTCACCAAGATGACTGTTTGTCTC
CATCAACTTTACATCAGATGAAACCAAGGAACCCTCCAGATGACTACCAT
TCAATCATAATGACGTAACCTCTGTAACTACTGTTGAGCGTTGTAAAAAA
CAAGACATTGTGCTTGCAGAAGATGAAATGTTTTATCCATATCAGGATGA
AACTCTCCATGCCATGGTTAATAGATATGtggcaatttttgaaaatggac
TTAACAATATTAGCGCAGCTGGCTTTTTGGATTGTTTAAAAAGCTTTGGA
ATGAAAAACAAACTCACTGATTTCATTAGCAAGCTTCCAATCTTCATATA
CATCCCCATTAATCAGCTCCTTGATAGCAGCGTTAACGGTTGTGCTGCGA
GAGAAGATTTTGGAAATTCGACTCAGTAACGAGTGATATTCACGCCGGAT
TTCAGAGGTTGGCTTCAAAGACATCGAAAAACTTGTTTGAAGAAACGCGA
AGTGCCAACTGAAAATGTGATGACGCCAAAAAATATGACGCAAATTGTAA
TCGAAAGATTGAACGAGCTTCAAGTCTGGGGCGATCATTTACATCGAGCT
AGCCCAAATCATCAATTCAGTGTATGAGGAATGCATAAAATGGAAAAGAA
ACTATTTTATGCTGTCTAgcggaaaaatttgaaatgaaataatCGGTGAA
ATAACCCGCCTCATCGACGAATGGGTTGATGGTTCTCCACTCAAAAAGTC
GATGATCATTCCCTGCCTACGGCTACAGAAGCCCAGCCGCAACTCCAAAA
CGAGAAATAACTCTGACGCCCTTAAACGGAGTTTCAACTATGGAAGAGTG
GAGACTTCGACGCTCTTATTCGTGAAGCACGTTATCTTCAATCGCAGCTT
TCATTTCGTCCAGGCACCCAATTGTTcgaagaaaaagtcaaaagatTCAA
TGCTCTAAATCGATCTTCAGGGATACCAAATCAATATCACCAAAGAGGGA
AAATGTCACTTAAATGTAGCAATCGGAATCGACGAGTTCAAAGTCGATTA
TGTATCAAACTATGTAAAAGATTGGATCAACTAACTCAAAGTACTATCTG
AGATTGCTAAAGCCTTTCCCCAATCAGCATATTGTGCATTTACCGCTGGC
TTTGTGCACATGTTCAGCTTCATTATTCGTACCATCCCAAACATCAAGCC
ACACCTTCAGCCCTTGTAATGTGTCATCCGTCATCCGTCATCATTTCCGC
ACTGTGCGAAGGTAGAACCTGTAGCGACCACGAACGCCAATTACTCTCAA
TACCTGTGAAGCTTGGTGCTTTGGGAATTGTCAATGTTTTGGAGACCTAC
GAGCTCGAATTTGAACAATCCGTCAAAGTCACGCGAAACCTCTTCGCATG
GTGCTTCAGCGTGGTTTTCTTGACGTGAGGGTGTTTTCCCTCTTTGCTAG
AAGTTATCGCAGCCAAAATCTTGCTAGTGCGATAAGGCTCATGGAAAAAG
AGAAGAAGCGAAAATATATCAATTGCATTTTAAAACAGGAGAACGGTACA
TTCACCCCACTGCTTTTCTACTCAAATGGTGGCTTGAGCAAAGAGACCAA
ACTATTTTACGCTCGCCTAAGTGAACtgttatgtgaaaaataaatgtgCA
TTCTCAGATACCTATTTTTATGTATGGAGAAAAATTTCATTTAGTTTGAT
TCGGTCAGCTGTGGTGTGTTTGAGAGATTCGATGTCCTGGAAGCACCAGA
GACACTCTACTTCCAATAACACGACAGCTGATGCTGAAATTACAAATTTG
ATTTGTAACATCTtacttttatttgattattgtttgcgtttttggggtat
tttttttggtttgtcttttttggcatttttcaggttttcttaCTTTCTTT
CCATTCACAGCTCTTGGTCTTACcatattttctcatttttg
Run BLAST on NCBI

transcript from alignment at scaffold_479:44181..58723+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068083 ID=TCONS_00068083|Name=TCONS_00068083|organism=Clytia hemisphaerica|type=transcript|length=14543bp|location=Sequence derived from alignment at scaffold_479:44181..58723+ (Clytia hemisphaerica)
aaacaaagtaaataaaaggagacTGTGCAGAATTTATTGAtgattctttt
taaacaaaaatgaaagaacCCAACAGGAAATGATGCCTTGGTTTTATGGA
GGAATGGAGAATGTGATTAATCGTTAAAGTGACAGTTGATTAATGTAAGT
CTATTGCTTTATCTCAATGTTCTTCGCCTATTCAACACATTTCATAGTAC
ATTAAGAGAAATCATTAAGAGTTTATCATTTCAATGCTGAAAATTTACTA
GGATTTCTTGTCAAGCTTAATTCCTGCATGAACTATGGTTGCTAAACTTT
GGAAATAGGTCGATAGAGGGACATTATGTGTTATTTCTGAGCACATTCCT
AGAACATTTAAGTCATGTTACAtgttataaaaaacaaaaggattaattca
aaatcaagaTTTGGGTCTCAGAATATTCAAAACTATGATTGATGGATAAA
TAAATTGGGATCTGATCAGAACTTTATATCAGATTCCGTTGATTAAAGTT
TTAAGACAAATTTTCATTCCTACTTTATACTAATCTGACCCTGCTGCAAT
TAGAAAATTTGTTTAAACTTTTTGTCAAGTGTGAAATTCGCATTCCTAAC
TCGAAACTAGAATCTGTGATCTGAAGGGGGGCTGTTGTTGGTTAATCATA
ATCATTTGAGACATTTGGTTTGGATTTTGTATTTACCATTTTGTAATTGT
GCTGCTTTTCAATTTCAGGTCTTGAAGAAGTTTAAAAAACATGCAATAAC
AACCATACCTTCTTCATAATTTGTTACTACCAGGTATGCAATTCATTGAT
GGAAAATTAGATGTTCATATTGGAATATTATAAACTCTAATGATTCAAGA
CTTTTACATCCTTCTTTTTCGTAACTCATGGAGATATTTACGTGAAAATG
AAACTTTAATCTTCTCAtacattttttgtttggtttCAAAAAATTACATT
ACGTCATACTTTTCATTCTTAGTTAAAGACGATAAAGCTCTCACCAAGAT
GACTGTTTGTCTCCATCAACTTTACATCAGATGAAACCAAGGAACCCTCC
AGATGACTACCATTCAATCATAATGACGTAACCTCTGTAACTACTGTTGA
GCGTTGTAAAAAACAAGACATTGTGCTTGCAGAAGATGAAATGTTTTATC
CATATCAGGATGAAACTCTCCATGCCATGGTTAATAGATATGtggcaatt
tttgaaaatggacTTAACAATATTAGCGCAGCTGGCTTTTTGGATTGTTT
AAAAAGCTTTGGAATGAAAAACAAACTCACTGATTTCGTAAGTCTATTAT
AGTGTTTGCTTAGTAAGGTTATTTGGTCTAGAGACCCCAGGGCTAAGTCA
ATTTTTGAAGTTCCTTATTGACAAAAACTGGTTGTATTATCTTATAGAGA
TTGAAGAGTGAATCTCCAAAATGGGTCATTTGTCACATTTAgttgaattc
atgatatgcaccattgcaatgtcttcacgCGTCACATTGCGTAACATCAC
GTAATCTGTCCTTGGTGCCATGTTGGGTTGAATAAAAAATCAGCGGGAAA
ATAATCAGGTAGCAAATTCAATGTGCTTTGTctcccaaaatcttaaaata
caCCCAAACCCCTACCTCTCGTTTCTGGGAATTTTGGAATATCTTAAAAT
TCTGATTTTACAAGTCACGTTGAATAACTTCAACATAAATCATGCAAATT
ATTGTTTTGAAGGGGATTTGTACCCACAACGTGGATCTACATCTGTATTG
ACAATCAAACCAAGTGCCATTTAGCCACCAGTCATGCTCACaaaacgaaa
tttttttttataattatatcgATTTGTAGCCGACACTTAGAAGCGAAacc
gaaacaaaaacaaaccagGGAAATGGTATCAAGTTTAAAACATATTAAAC
ACGAAATGAAAAGTGAAAGTTAGACATTAGTGAAAATAAATGCATAGTTG
CCAACCGTCCCGCATTTCAGCTCTTTGTCCCGAGTTCAGCCCGCATACCT
TAGATGTCCcgcatttttgagaaaactcAGAAATTCGTAAAACTCTTGGG
GAAAATATAGAAATGCTACTAAAAATATGTTTCCACAAGCACAAATACTC
CCTCGTTTTTTCACTTCGCTCCGTAACGGTCCATCCAATTGCGTGCGTGC
GTCCGTATTCAAAACATCAGATACGCGTTGGACAGAGATGTAATAGTACT
ACATGAACCATGTCCAATACATATAATATTTATTGAGGCTAATGCGCGTG
ATTCGCTGCTAAAGACTGTATTGCTCCACaacagtgtttttttttcttcg
atcaTTCATTTCTAAAATGGTGACTGAAGCGAAGAAAGCTAAAAGATTGA
CCAGCTTTAGTATTGTTTTTAGCCATTCCTACCAGCTCAATTTTTCTCGC
TCGCTCTTTGTCCCGCTTTTCCATTATCAGAAGTTGGCAACTATGTAAAT
GGATGAAGAAATTAAAGATTTGTGGGGGTAAATGTTTATCTTACTATCAT
AAATTGCCAACTGCAGCAAAAAGCAGGTATGATGCCAAGCTTGTTGCAAT
GCAGCTAGTGTATGGCCCATTtgtaattgaaaaaatatactACCAGTTGA
CTGACCATTTCGAGCAATGGCCAAATTTGAGTTATGCTGATATATACGCA
TATCTTATTGACCACCCCAGCACATAAAGCCATCAGCAGTTGAAGGCATA
CAAAGGACTTGATGGGTATAAATATGTAATTGCCAAACTTGTCTATAACG
TCCTTGTTAAACCAATGAAACTTGTAGATGGAAACTACCATTTGGTCATG
GCCAAGGTTTGTCATGGTCAAAGTATGTTTAGCAAGACACCTCTGGCATG
GGTGTATTTGAATCTTGATGGCAAGGTTTGCTATGCTCTGGACTCGGTGA
AGCAAAGAGAAAAAGCATAGAGAACGGATGTAACCTAACTCTTGTACGTC
ACTGAATGCCCATGACTGCCAGATTCTGCTGTCAAAGAAGTTAAGTGTTC
ACCCATTTCAGAAATTGATTCCAGCCACCCCTTTTTAAGCGTACCAAAGC
CTGCAAAAGATGAACAAAATGACTTTAAATTGCTTGTTGGTAACAGTGCC
GCACTTTTGTTGAGCTAGACATGACATTATTGCATTAAGTGAACGTTATT
TTAACGAAATTTCAGAATAAAAGAGATTGGTTTCATCGAATTCAAAACCA
GGctaaatcaaatttttggtTCAAAATGCAAGCTGGTATCATAACAGCCA
GTAATTTTCGTCAAGCCTGTCACACATATTCAAAACCCTTTCTCAAACAT
TGATTTTAGACATTTGCTCTCCATTTACTATACAATTTACTTCAGCagca
attaatttgaaaagGATGCACGAAATACATTAAATGTATAATTAAGCTTG
CAGCATCAGAATTGTACGTCCAAGCAAATGGTACTCAAAGAAATATACAG
ACATTCCAGAATTTACGATTGAAAACACTTCCTCCATTGCTGAAAATGAT
TCCGAAGATTTGTGTTGTAGATGTAATGGGGAAGGGAATGAAGTTTTAAT
TGTTTGTGGAGATAAATTGTGTGTTCTTAGAGCACTGTATTATTTAAAAT
GTGTTGGTTTGGATTCTGCGCTGAACTTTTATATTGTAACATATTCTTTA
TCATAACAATAATTGCATCAAATATTCTATCGCGGTTTCTATATAATGTA
TGTatattataaataaaatattttgtatatttatCCTAGGAAAATCATTT
ACATAATTTTTATTCAATTCGTTTAGGTAATTTTTAAGGAGAATCTTATG
TGTTTCTAGATCTTTctatgtattttccaaggaaaattgatACATAATAT
TTTTTGAGTTAAATTTACGTATTGTCAAAGGATaattaaaagaatatatt
tttgtgattgttttatgtattttccaaggaaaagtATTACAGTATTTTAT
GTATTAGTAAATTAGATATGTTCACATGTAAGGAAATTAAAATCAACACA
ATATATTTCATCTCATAAGGAAAATTGAAGTTTAACTGTTGGAAATCGAT
TAcgtatttttcaagaaaaattgagTTCAGTCTTTTTCAcgtattttcta
aggaaaatcaGCACAATATATTTTAGAGATtaatttatgtattttataaa
gaaaatcaaggtCTAAGTGTTAGAGATCGATTTCGTATTTGTCAAGAAAA
GTTAAGTTTAGTCTTTTAtcgtgtatttttcaaggaaagtcGACACAATT
GGCTTTAGAGATTTATTTGTAATTGATAAAGAAAATCGAGGTTTAATTGT
TAGAAATCAATtacgtatttttcaaggaaaattgtgGTTTAACCTTTTTT
GCGTATTCTCTAAGGAAAATCAAcacaatatatttttgagatttaTTATG
TATTTTATAGGGAAAATCAAGGTTTAATTGTTAGAAATCAAttctgtatt
tttcaaggaaaattgtgGTTTAACCTTTTTTGCGTATTCTCTAAGGAAAA
TCAAcacaatatatttttgagatttaTTATGTATTTTATAGGGAAAATCA
AGGTTTAATTGTTAGAAATCAAttctgtatttttcaaggaaaattgtgGT
TTAACCTGTTTTGCGTATTCTCTAAGGAAAATCAGCACTATACTTTTGAG
ATTTATTATGTATTTTATAAGGAAAATCAAGGTTTAATTAATAGAAATCA
AAtacgtatttttcaaggaaaattgtgGTTTAACCATTTTTGCGTATTCT
GTAAGGAAAATCAAcacaatatatttttgagatttaTTATGTATTTTATA
AGGAAAATCAAGGTTTAATTAATAGAAATCAAAtacgtatttttcaagga
aaattgtgGTTTAACCATTTTTGCGTATTCTGTAAGGAAAATCAAcacaa
tatatttttgagatttaTTATGTATTTTATAAGGAAAATCAAGGTTTAAT
TGTTAGAAATAAAttctgtatttttcaaggaaaattgtgGTTTAACCTTT
TTTGCGTATTCTCTAAGGAAAATCAAcacaatatatttttgagatttaTT
ATGTATTTTATAAGGAAAATCAAGGTTTAATTGTTAGAAATCAAttctgt
atttttcaaggaaaatcaagGTTTAACCTTTTTTGCGTATTCTCTAAGGA
AAATCAACACAATATATTTTTGGGATTTATTatgtattttctaaggaaaa
ttgaGGTTAAATTGTTAGAAATCAATTTGTATTGTATTGCTcccaaagaa
tttttttcaaacagctCTGTTCAATTTGTGTGTTTTTCGAGGAACAATTA
TTTATTATTAGAATATATCATAGTTATTAATagagtttgaatgtttttga
aaatccaCTTAAAGGTATCACTTGTTACAACTGAAATtaagatttataaa
atatatattaatcgttaaattcgcgaaagtaaatgtcgtgaatttcgcgg
cTTTTCGTcctcgtgaaagtttctgctcgcgaaagtttgtacgcctaaag
tatgttGATGCCCGAGCAAAAAGCTCGGAAGCTTatatataaatatttca
aagcAATCGATGATAACCAAGCACTTTCTAGATGGCTCACGAAAACACGT
AGGCATAATTTTGTACAGCTCTTCTCGTTCAGGCCAACGAACCAAAAAGC
TCATGCGCCTAGCCAATAGTCTCGATCAAGCGCTTAAAAATCCTACTAAC
TGTAGATTGGTGTTCTCTAAATATGTAGGCAAGGTCTTGCTCTAAATGAC
CAAGCCTCGGTCTCATCAGAGTCATGATCATTTGTTGAAACTTGGAGAGC
TTCGCTGTTAGGGTCGGTTCGATGTGTGGGTATTGATAGTATCTAGCTCT
AGGAGCTGCTGCATTTGGAAGGTCAGTGTAGAAGTTGATTTTGAAGTCAC
TGTCAAAGAAATTCCAACCCCATTTATAATATTCAACTTCtgcctgaaga
tttttaatttCACTGGATGAAATGGACGAGtcaagtcatacccttagagg
ggggttttcacttttacggtatgacggtattgggcctttttacccccggt
aaatcggtattacgagaaaaaaacgacgggattacggtatttcattttcN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNttgtcggtatttcgatatttttatcaataaaaaacggt
atttcggtataaaactatttaccttttagtttcttcatgagtttcatgca
gaaaattttttaagtctattccgctattttaacaagtaaaatttttttgc
tcgcttcgctcgcacaatcttggatgtcctattgagttattgtcatggtg
aggttattcaaaataagcaaaactttacgatatctaaacaaatattttag
ttatttttctgtgggcgcattttttaatgacattttttgtgatgcaaata
ctgcatccaacgaatgagtctagataaaattttctccatcagcactaaat
gatatggtcgtctctccgtattcactgATACTGttactgcagtaacttag
agacagtaaaggcgatatttactccttcaataattagtaaaacaTCTTGc
gcagcatcgaacgattaaaaaataattcacatcatgatgcacatgatgcg
ttttcaggcaatctaggcattctaaattttaaattttttcttgggcgaaa
ctcttggagcgccgcaccgggtacggcaggtacgtcgctcgccgtaccat
atttttctttttgccaacaaatggtaagtgttaaataaaatcaaaaattg
tgtgaccaaacaaggcatacttggccaacaatagcgtattaaggccgttt
ttcaataacaaaggagagcgaaaattgtcgaaaaattttcgcgctcgctt
cgctcgtgtTCTTATTctccatttattttctttcctctgATAGGGGGGGT
TAAACTTTGcgtcctctagttgcaccacagcaccacctctatgaagcctg
tgttgaagtcttTCGGCTTCTCAGACCATGGTTGgaccaaacctcgattt
taaattaattctcaatataaaagacatcttacgggtctgcgaggaagaaa
ttatttggagaaaggcttaattttgcatttgcttcccgtaacaagcaagt
aattttggcgcggcagacctaaagtattgctttatgaaagctcaaatagc
tgtaaaagaggccttaaaaagtcgacgatattgtgaataaggtcacaaaa
ctagcaaaaaactttatatattggcgaaaatggttggtataagaataggt
caatctgtttaaaagataccataaaaaggttaaatttagcccaataaggt
cacaatcgtttaaccaaagatgtaaaagcaaaattNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNccccccccccccccttagagagact
ttattacaattttttctctgggaatcaaaaaatttcctaaagaTCCTGAT
TTTccgacctttagagagactaatttaaaactttctgatttttccgaccc
ttagagagattttgAAAGGTGTCAAAAACGAACCTTTTAAGTAagtggaa
aaatagaaaaattgtcATGTATGAAAACAGTCAAAGGTAAAAAGATAAAC
ATAATCAGATCCCCTTGGGACTCGAACCTTTAAGTTCTAAAAGAGTTGTA
ACACAAGCACAACTTTAAATTCATAAgttgtatattttttaatacagTAA
AGATGGAAGGTTTACGTCAAATTTAACATCTGACAGAAATCAAAGAGAAT
AAacttatatataatataatttataatataacTTATATTAAAGGATTTTC
ATGGGTCATGGGACTCGAACATCTAAAACAGCACCCTCTAATCTTAACCA
CTCACAGTAGGCCAAAAATCTGAAGCGGAGTGGTTTCAAGTCTGGTTCTT
GGAAAGACTATATTCCTTGCACCTCGCAATTATCATTATTCATTTCATCG
CTATCCGAGTTATTTTATGCAAGATTCCGTTTTTGGTTAGACAGAGTTTG
CATCGCACTCGTACTTTGTAAATTATGAGAAATAGTTGAGTTTATAGACC
TTtatacccggggggggtacttaggcaaatggagggtacggtatgtgccg
cccttaagggaaccttttttggatttccaaagtcgcgctaagggtcggaa
aaatcagaaaatcaaattttagtcccactgagggtcggaaaaatgaaaaa
atttcaactttcgaccccctgaaagatcgaaatttggtcaaatttgtccc
gctaagggtcgtaaagggtgggggggcgtacggggtttgcgatttccaaA
ATACCGAATAAATTTGCCGAAATTCCGAAATAAATACTTCCGATTCCGAT
ACcgtttttttgggtattttttctcgttttaacaaatttttcatcaaatt
tgatttttcatgtatgaattccgaaaaaagggataaaaactttataatac
cgaaatttcgaagcaaaaattcatggatttccgataccgaagcaatttca
gaatttcgaaataccgaaggaattttgcctgatttccgaaattccaaaga
aaaaaGATCGACCGTCTGCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtctatccagatataattgg
cagtggaaacaagaatgcctgtaacttttgatagtcaaatataattgcga
ttatttttttGCGTATTTTatagaatcaaaagcgctatatttgaatgtat
ttatGGCTTCAACCTAAGTTTaagaaggttgtcaaatttcaaggcaaacg
gaaaagtccttcggaagatatgtatgatggcccagaaggctcaaaacaCG
CACTTCTAAGTTTTCACGCACtcccagttcttataaaatttgtgaactag
aactcgactgtctagggtcaatggcccagaaggctcaagtgacaTTGTGT
acttctgactttttgtcaCGGTGGGAAATTTCCAAGCAAGCGGCCCGCgc
ataatgaaattttttttggtctttaaaatgaatgtcgagttaggcaaaat
gagttaaaatttccgagttgttcatatcaagagttacaggttaaaatttc
aagatcactaaaaaagggaaaagtttaggagaggcgtgataaattcgggt
ggagtaagcagtggtggagatgtttacagtgttttgttccaaaactctac
cgccacttttttcccgtaaaccgccttGACGCCCTAACTCTCCCCCGCGT
TTACTGActtttaaacggacgatagcatcgtctacaatagtagtacagtt
gacgctctctaattcgattttcaaggggaatcggattttcatcgaatacg
ggagcgtatcgaatagtagaaagtCTCCCTAATCCGATAAACACGAGGTA
AATATCGAATTATAGAgctgagaaagaaaaatataagcgAGACTCCGATT
TGGTTTGAACGCGAATCAGGATAAATGTCTAAGTTCTTGCTGAAAACCTA
AGTTCTTCGGAAGAAAACTTTCGATATATgcctgttttgaaaagttttga
ggaatcgaatttcgaaattataattcaaacgcaaaaaaatcgaaaatttg
aatttcgaacTCCGTCCTAAAGGCCTTTTTACACGCtagaaatcgaataa
gagagcgaaaAACCTTCAagggacttcaaattttcatcgaaaacggaagc
ttatcgaataatagaatgtcgaatagtagagcgtagtTTATGAGAGTTTG
TTAAGGAAATTTGACGGTGACTTGACAGTTCTAGTTTAACAAATTTTATA
CGAACTAGAAGTGCGTGGCGAGTTTTAGGGGCCATTGTAGATATatgacc
cgaaataccccttgctaCAATCATAGTTGAAATCTATTGAGAACTAAGCT
TATTTCtgcgttttttgaaatttggagttcggacgagaaagtcgattttg
ggccatctctcaaatttaatcggatatttaaatttggctcGGTTTTATAG
GCctttccaacctactttagagcacttacaaatcgattgtggtttcaaaa
cttcccggtggatttccctttttttctcaaatattacgaccatgattgta
gcgcttttctgtgaaacatcaaatctccaaatttttactGTGAAACTGTG
AACTGTGAAAGAGATAAGCTAGGAAAAGTGAATTCagtattgttttttta
ataaactcGACAGAGAAACTGTACGTAGCCTCATAGCTATTACCccgatt
ttttttagaattttttctcgGTCGTTTCAGCCATTTCTAGCTATATTATC
TCTAAATGAAAGGCGGTCAGAAATATAAGCAGTCATTGAAGGTCATTACA
CGTGAATTTTTAGAGAAGTTGAGCTCGGTATTAATATGATCCCGATTTGC
TAGGGTGGAAGAGGTCAaaaagggtgtttctaagtcaCTCAGGCGGGCGA
TATGGGTCGGGCGGTATTAGATAGGTTTTCGGATTATCAACAATAAAAAC
CTCTAAATAGCGAAAGGTTATCACTCGCAAAACATTAGGGAGGTAAAACT
GCGGAGATAAATGTTAGTCTAAGTTTTAACTGCCGCACGcataaaattga
taaagttGATACAAGACATGGCATCCCAAGGAGACtttcacattttttca
atttctcgaAACTATGTCACTTGACCTACCCTAAATACGCCTCTGATCGA
CCATACTCCGCCGCTCAACCagaacaagtttgttttgatctaaAAAAAGT
ATTTCCCGCGGATTTTTTATTCAACACAACATGGCGGTAAGGACAGATTA
CGTAATGTTACGCAATGTGACGTGTAAAGACATTGCAAGGGTGAATAACG
GAATAAGCTTCCAAAATGCAAACTTTATGCTGAAGTCAGcatttttagat
gaaaaaaagtttcaacaggTTCTTTTCGCAGCTCAAAATATATGAAGATT
TAGCTACGGTAATCCTAAAGTTTACCTCTAATCGACAGAACTCTTCTAAA
TGCTtctgttgaaaataatttttcttcaaaaattatctCGAAAATGCTTA
TGTCAGCAAAAGAATTTACACGTATCGTCCATTTCTGGTCGACCAAACGA
GATTAATAACCCCGTTTTGGAAATGTACTCTTCAAGTTCTATCAGATGGT
ACGGTCAGTTTTTGTCAATtaagaacttcaaaaattgactttccAAGGCT
CTCTAGGCCAAACTGACCTTACCTCCTTCAAGGCCTATATATACTACTTG
TCAGGGTTACTCAAAACCGCCACCGGACTAAGTTCATTatatttaaaaac
ttaaaagcTAAAATGAAATGATGCTATTAAAGCAGCATTCAAATCATGGA
TGAgttcacttttgattttgaatgttttaccTTGACTAGCCAGGTACAGC
AGCCTTCTTCCGCTTAGAAATGATGTAATCAAATTCTTAATTAAACAGGA
TATGTCATACCGACTAACTTCAGTTGGTTTGCGATAATGTTCACTTAGAA
TCGATCCCATCAGTCTGAAAACCACATCACTGGTCTATAGTTAACTGTCG
AGTTATTGTTTTCTTTTGCCTTTTAGATTAGCAAGCTTCCAATCTTCATA
TACATCCCCATTAATCAGCTCCTTGATAGCAGCGTTAACGGTTGTGCTGC
GAGAGAAGATTTTGGAAATTCGACTCAGTAACGAGTGATATTCACGCCGG
ATTTCAGAGGTTGGCTTCAAAGACATCGAAAAACTTGTTTGAAGAAACGC
GAAGTGCCAACTGAAAATGTGATGACGCCAAAAAATATGACGCAAATTGT
AATCGAAAGATTGAACGAGCTTCAAGTCTGGGGCGATCATTTACATCGAG
CTAGCCCAAATCATCAATTCAGTGTATGAGGAATGCATAAAATGGAAAAG
AAACTATTTTATGCTGTCTAgcggaaaaatttgaaatgaaataatCGGTG
AAATAACCCGCCTCATCGACGAATGGGTTGATGGTTCTCCACTCAAAAAG
TCGATGATCATTCCCTGCCTACGGCTACAGAAGCCCAGCCGCAACTCCAA
AACGAGAAATAACTCTGACGCCCTTAAACGGAGTTTCAACTATGGAAGAG
TGGAGACTTCGACGCTCTTATTCGTGAAGCACGTTATCTTCAATCGCAGC
TTTCATTTCGTCCAGGCACCCAATTGTTcgaagaaaaagtcaaaagatTC
AATGCTCTAAATCGATCTTCAGGGATACCAAATCAATATCACCAAAGAGG
GAAAATGTCACTTAAATGTAGCAATCGGAATCGACGAGTTCAAAGTCGAT
TATGTATCAAACTATGTAAAAGATTGGATCAACTAACTCAAAGTACTATC
TGAGATTGCTAAAGCCTTTCCCCAATCAGCATATTGTGCATTTACCGCTG
GCTTTGTGCACATGTTCAGCTTCATTATTCGTACCATCCCAAACATCAAG
CCACACCTTCAGCCCTTGTAATGTGTCATCCGTCATCCGTCATCATTTCC
GCACTGTGCGAAGGTAGAACCTGTAGCGACCACGAACGCCAATTACTCTC
AATACCTGTGAAGCTTGGTGCTTTGGGAATTGTCAATGTTTTGGAGACCT
ACGAGCTCGAATTTGAACAATCCGTCAAAGTCACGCGAAACCTCTTCGCA
TGGTGCTTCAGCGTGGTTTTCTTGACGTGAGGGTGTTTTCCCTCTTTGCT
AGAAGTTATCGCAGCCAAAATCTTGCTAGTGCGATAAGGCTCATGGAAAA
AGAGAAGAAGCGAAAATATATCAATTGCATTTTAAAACAGGAGAACGGTA
CATTCACCCCACTGCTTTTCTACTCAAATGGTGGCTTGAGCAAAGAGACC
AAACTATTTTACGCTCGCCTAAGTGAACtgttatgtgaaaaataaatgtg
CATTCTCAGATACCTATTTTTATGTATGGAGAAAAATTTCATTTAGTTTG
ATTCGGTCAGCTGTGGTGTGTTTGAGAGATTCGATGTCCTGGAAGCACCA
GAGACACTCTACTTCCAATAACACGACAGCTGATGCTGAAATTACAAATT
TGATTTGTAACATCTtacttttatttgattattgtttgcgtttttggggt
attttttttggtttgtcttttttggcatttttcaggttttcttaCTTTCT
TTCCATTCACAGCTCTTGGTCTTACcatattttctcatttttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042506XLOC_042506Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068083-exon-scaffold_479-1491911889:44181..44324TCONS_00068083-exon-scaffold_479-1491911889:44181..44324Clytia hemisphaericaexon
TCONS_00068083-exon-scaffold_479-1510915933:44181..44324TCONS_00068083-exon-scaffold_479-1510915933:44181..44324Clytia hemisphaericaexon
TCONS_00068083-exon-scaffold_479-1575043694:44181..44324TCONS_00068083-exon-scaffold_479-1575043694:44181..44324Clytia hemisphaericaexon
TCONS_00068083-exon-scaffold_479-1491911889:44899..44963TCONS_00068083-exon-scaffold_479-1491911889:44899..44963Clytia hemisphaericaexon
TCONS_00068083-exon-scaffold_479-1510915933:44899..44963TCONS_00068083-exon-scaffold_479-1510915933:44899..44963Clytia hemisphaericaexon
TCONS_00068083-exon-scaffold_479-1575043694:44899..44963TCONS_00068083-exon-scaffold_479-1575043694:44899..44963Clytia hemisphaericaexon
TCONS_00068083-exon-scaffold_479-1491911889:45153..45467TCONS_00068083-exon-scaffold_479-1491911889:45153..45467Clytia hemisphaericaexon
TCONS_00068083-exon-scaffold_479-1510915933:45153..45467TCONS_00068083-exon-scaffold_479-1510915933:45153..45467Clytia hemisphaericaexon
TCONS_00068083-exon-scaffold_479-1575043694:45153..45467TCONS_00068083-exon-scaffold_479-1575043694:45153..45467Clytia hemisphaericaexon
TCONS_00068083-exon-scaffold_479-1491911889:57107..58723TCONS_00068083-exon-scaffold_479-1491911889:57107..58723Clytia hemisphaericaexon
TCONS_00068083-exon-scaffold_479-1510915933:57107..58723TCONS_00068083-exon-scaffold_479-1510915933:57107..58723Clytia hemisphaericaexon
TCONS_00068083-exon-scaffold_479-1575043694:57107..58723TCONS_00068083-exon-scaffold_479-1575043694:57107..58723Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_479supercontigscaffold_479:44181..58723 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.471326	0.0013775	0.243874	0	0.368137	0.65239	0.507478	0.979735	0	0.632743	0.163869	0.190666	0	0	9.80695e-08	1.03238e-08	6.95422e-08	2.7409e-07	0	0	1.0354e-07	0.21311	0	0	0	0.0405257
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068083 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top