|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068037 ID=TCONS_00068037|Name=TCONS_00068037|organism=Clytia hemisphaerica|type=transcript|length=277bp
ACAATATACTTTCAAGTTCTGAACAACTGGACAAAATTTGTTTAATGGGC
ACAACACCAACTTGAATTtgatcaaaaaatgaaaaaaagatctttaagtc
aaaaaataattctttccTTTACATTCGTCAATATACATTTTCGAGTGGAA
TATTTGAAGATCTGTTTCGCCATGCATGTGAAGTTTTACAActgttttct
tttcttgataATGTAACTTTGTTTAGTATTGttaaatatttattattttt
tcatttctttaaacAACactaaaaaaa Run BLAST on NCBI transcript from alignment at scaffold_478:255956..257832- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068037 ID=TCONS_00068037|Name=TCONS_00068037|organism=Clytia hemisphaerica|type=transcript|length=1877bp|location=Sequence derived from alignment at scaffold_478:255956..257832- (Clytia hemisphaerica)
ACAATATACTTTCAAGTTCTGAACAACTGGACAAAATTTGTTTAATGGGC
ACAACACCAACTTGAATTTGATCAAAAAATGAAAAAAAGATCTTTAAGTC
AAAAAATAATTCTTTCCTTTACATTCGTCAATATACATTTTCGAGTGGAA
TGTTTGAAGAAGATCTGTTTCGCCATGCATGTGAAGTTTTACAACTGTTT
TCTTTTCTTGATAATGTAACTTTGTTTAGTATTGTTAAATATTTATTATT
TTTTCATTTCTTTAAACAACACTAAAAAAAAGATAAACAGTTTATTAATG
AATTTTTGTAATCATGTGAAGTATATGTATTGAGATTAAATTTCAAGTTC
AAATCTTCTTTTGTTAGGCTACTATAAAATAACATGTTACTCTTGTGAGT
AAACTGATTCTATAGTATTTCTGGAACTCCCCCTGTTAGAGACTACTATA
TAAAAACCTAAGTAACCTCTATGCTACAAGTTGCACTTGTGAACTGAATA
ATCTATAGTATTAATGGAAACCCTTCCCGACCCAGGGGGGGGGGGNATAT
TTTCCGAACGAACGAACGAACGAAAAAACTTACTTGTGCGTTGTCAATAC
CATTTTATTAACAAACACGATCAATAATGATGATGTTGCATAAAATAACG
CAGTCGAAACTTTACGAACTGGACTGACCATCATAACGAAGAATAAGGAT
TTTGTAGACCAGAAATGGTATTGTTCTAGAAAAACAGAAAAAATATAATG
AAAGGAATTATTTAAGTGAAGTTTGGATTCATACTCAATCTCTGAGTAAC
CATCAAATCATCAATCGATTTGATAAAAAGTAGAATTCCCTGCAAAATTT
TAAACATCACAAATGACTTTTTAAGCTGCTTTTGATACGAAGAGTAACAT
GAGACTTGTTTTATTAAGACTAGGAATAATATAGCCTATATGTCACTGAA
CCCCTCCGAAATCGAATTACCCAGCTGGCACACAACATTAATACAATAAT
GACCGGTTAGTGAGGGCCCGAAAAAACCGGTCATTATTGTATTTGTCAAT
CGTTTCCTTCAGCTTCGATTGATTTTTAGCGCTTTATCCAGGAAAAATAG
CGAAATAAAGGGAAAAAACAAGCGAAAAGAGATATTGTTATAATTTCTCA
CGTTAGAAATAAAAAATGTAAGAAATAATGTCAACGCATTGTTCATTTTC
CTTTGAAAAAGTGACGTCACAATGAAGTTTCCTAACGACGGGCAACTCTG
GACAATGTAGGCCCGTCGTCATGCGAAAAGAACCAATTACATTGCGCAAA
AAGCCGAGTAGCCCGCTTCGAAAAAGTAACTGGTTAACAATGTTTCAACG
TTCATCTAACGTTAAATGGACGTTGTGAACGTTAGATAAACGTCGAATAA
ACGTTGTGTGCCAACTGGGATCCAATCAAATAACCTCCAGTTCTTGTTTC
ATTTTCTGTTTAGTGGCCCTTTATCCTACAGGAAATTTCAATTTTCGTGA
ATTTTTGTCCCTTACAGAGACTCAATTTGCTTTTTAAGATTAAGAATATA
CACGTATACACGTCACTCGGATTTGAAGGGTTAAGGTGGTCATACTTACA
TAATATACTTTTAAGTTCTGAACAACTGGACAAAAGTTGTTTGATGGGCA
CAACACCAACTTGAATTTGATCAAAAAATGCAAAAAAAGATCTTTAAGTC
AAAAAATAATTCTTCCCTTTACATTCGTCAATATACATTTTCGAGTGAAA
GATTTGAAGATCTGTTTCGCCATGCATGTGAAGTTTTACAACTGTTTTCT
TTTCTTGATAATGTAACTTTGTTTAGTATTGTTAAATATTTATTATTTTT
TCATTTCTTTAAACAACACTAAAAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068037-exon-scaffold_478-1575043694:257682..257832 | TCONS_00068037-exon-scaffold_478-1575043694:257682..257832 | Clytia hemisphaerica | exon |
| TCONS_00068037-exon-scaffold_478-1575043694:255956..256081 | TCONS_00068037-exon-scaffold_478-1575043694:255956..256081 | Clytia hemisphaerica | exon |
| TCONS_00068037-exon-scaffold_478-1510915933:257682..257832 | TCONS_00068037-exon-scaffold_478-1510915933:257682..257832 | Clytia hemisphaerica | exon |
| TCONS_00068037-exon-scaffold_478-1510915933:255956..256081 | TCONS_00068037-exon-scaffold_478-1510915933:255956..256081 | Clytia hemisphaerica | exon |
| TCONS_00068037-exon-scaffold_478-1491911889:257682..257832 | TCONS_00068037-exon-scaffold_478-1491911889:257682..257832 | Clytia hemisphaerica | exon |
| TCONS_00068037-exon-scaffold_478-1491911889:255956..256081 | TCONS_00068037-exon-scaffold_478-1491911889:255956..256081 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_478 | supercontig | scaffold_478:255956..257832 - |
Blast
The following BLAST results are available for this feature:
|
