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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068015 ID=TCONS_00068015|Name=TCONS_00068015|organism=Clytia hemisphaerica|type=transcript|length=213bp
TGGGAATAAAATTAACACAAACACTCCAGAACATATTTACACAAAAGATA
TATCGCACGGTCACAGAGTacatattcattcaatcaagaGAATCACATCA
AATCACATATTATATAATACATACATACAATATATTACACAGGAAAAGAT
GAATAACATAGTAGGATATATTATGATATTATGGATGCTAGatTCAAATT
TCTCTCCTTTTCA Run BLAST on NCBI transcript from alignment at scaffold_478:476474..477835+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068015 ID=TCONS_00068015|Name=TCONS_00068015|organism=Clytia hemisphaerica|type=transcript|length=1362bp|location=Sequence derived from alignment at scaffold_478:476474..477835+ (Clytia hemisphaerica)
TGGGAATAAAATTAACACAAACACTCCAGAACATATTTACACAAAAGATA
TATCGCACGGTCACAGAGTacatattcattcaatcaagaGAATCACATCA
AATCACATATTATATAATACATACATACAATATATTACACAGGAAAAGAT
GAATAACATAGTAGGATATATTATGATATTATGGATGCTAGGTAAGGAAA
TACTCTATGGGAAAATATAATTGGGGGTTTTCACAGTTGGCAGAGGAGCG
AAATCATGcctttttcggacggagtggcggaattcgACGAAAATTTCGGA
CAGAATTTAGGTCCTATATCGGAGACGGGAAATCGGTCTGTTTCAATCCG
ggaaaacaaaattttgcaaaaaatcgaTCAGAATTTTGGAATGGgaaaaa
atattcgaaataTCCAGAATTTTGAACGGAAATCTGGAATTCCAAACAAA
TTTGCGGTGGCAGAATTTTAGTGCTCGTTTAGACTGATAGACGCTTTGTC
GGAAAAATTGAGGGAACAGTGGAATCGATAACCTCCTTGAAAACTTCCCC
CAGGGGTTGGGAATAGGAATATTTTGGAGGAATAAGATTTAGCCAATGTT
TGTGTCACCACTCTGGATTAGATTGGCTGAGGAAAAGTTTTGTCTAGGAG
ATTAAAGCCTTAATTTTCCAGGAGGTCATCCGGACCCCTCGTTTCGGTAA
GATTCTAATTCCCGGACTAAGATTCTTCTGACTTTTTCGGGATATTTCCA
CTGTTTTTCTCGGGAAAAGCTGTAAAGGGTTTTTCAGGATGTACGGATAA
TAGCCTGTGAGATGTACGGATAATAGCCTGTGAGATGTACGGATAATAGC
CTGTGAGATGTACGGATAATAGCCTGTGAGATGTACGGATAATAGCCTGT
GAGATGTACGGATAATAGCCTGTGAGATGTACGGATAATAGCCTGTGAGA
TGTACGGATAATAGCCTGTGAGATGTACGGATAATAGCCTGTGAGATGTA
CGGATAATAGCCTGTGAGATGTACAGATAATAGCCTGTGAGATGTACAGA
TAATAGCCTTTGAGATGTACGGAAGATAGCTTGTAAAGAATGAGAAAACT
GTCTAACTTTCCAACGTTCATTTTTAAACTAGCTGGAATTTACATTCTTA
CACGGTTGCTTCGCCAAGCCTGCAGATCAAtagtaaacaaattcaaattt
agtggggaaaacatcctccacattgcccgatgatgggagaagaatgtctc
taaacgtagccaaacgtaaatctcgtgatctaagccacgataaacttcaa
atatgaatatcactggaTTGataaacgcaaacttatttagatTCAAATTT
CTCTCCTTTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068015-exon-scaffold_478-1491911889:476474..476664 | TCONS_00068015-exon-scaffold_478-1491911889:476474..476664 | Clytia hemisphaerica | exon |
| TCONS_00068015-exon-scaffold_478-1510915933:476474..476664 | TCONS_00068015-exon-scaffold_478-1510915933:476474..476664 | Clytia hemisphaerica | exon |
| TCONS_00068015-exon-scaffold_478-1575043694:476474..476664 | TCONS_00068015-exon-scaffold_478-1575043694:476474..476664 | Clytia hemisphaerica | exon |
| TCONS_00068015-exon-scaffold_478-1491911889:477814..477835 | TCONS_00068015-exon-scaffold_478-1491911889:477814..477835 | Clytia hemisphaerica | exon |
| TCONS_00068015-exon-scaffold_478-1510915933:477814..477835 | TCONS_00068015-exon-scaffold_478-1510915933:477814..477835 | Clytia hemisphaerica | exon |
| TCONS_00068015-exon-scaffold_478-1575043694:477814..477835 | TCONS_00068015-exon-scaffold_478-1575043694:477814..477835 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_478 | supercontig | scaffold_478:476474..477835 + |
Blast
The following BLAST results are available for this feature:
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