TCONS_00068008 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068008
Unique NameTCONS_00068008
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1274

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068008 ID=TCONS_00068008|Name=TCONS_00068008|organism=Clytia hemisphaerica|type=transcript|length=1274bp
AAACACAACACTGCAGAAGCAAAGCAACATCTCGAAAGCATATTTGAATT
CGCAAATTTTGTCCATTTCCATCTTTCCGAGTACAAAGAAAACATTTGAT
AAACCAGTTGTTTTCACACAGCAGCACAGAGGAATCACAAACAACAGTGT
TCCCAACTGCGTGTATTGGCACGAATCAACGTTCGGTAGCCATTGGTCGG
ATGAAGGTTGCATGGTAAACACGTGGAATGCTAGTCACGTGACCTGCCAT
TGTTATCATTTAACCAATTTTGCTATTCTGATGTCTGTCACTGATGCTCC
TAAACAACTTTCGgaGGATAATGTGTTGGCATTGAGTTTGATCACAGTTA
TTGGTATCACCATCTCTCTTGGTGCTTTGGTCATCTCTTTCCTATCGTTC
GTCTTTATCAAGGCTATTCGTTCCCTTCGTAACACAGTTCACAAACACCT
GTGTGTTGCTTTGTTCATCGCTGAAGGAATCTTCTTGTTCGGAATTGATA
AGACTGGACACAAGATTGGATGTCAAGTTATCGCAGCATCTTTGCATTAC
TTTTTCTTAGTTGCTTTTTTTATCATGGGGCTAGAAGGGATTGTCCTTTA
CATGATGCTGGTTCGTGTGTACAGGTCAATGGGAACGTCTGGCTATGGGA
GTCCGAAATTCATTGCACTCTGCTGGGTCTTACCCTTGGTCGTCATCACA
GTGAACGTTTTCATCGATCAAAATGCTTATGGTGACATCAACGGAGCATG
CTGGTTATCGATAGAGAATGGATTTATTTGGAGTTTTGTTGGACCAGTCC
TCCTCATTGTCGGTatgaattttgtttttcttggaTTGACGATCAAAGTA
ATGACAGAGAAAGCTAAACGAAGAAATACAGCTGTCGAAGAAATCTGgtt
CTGGACGAAGGGTGTTTGTCTCTTGTTGAGCATATTGGGCGTGACATGGG
TGTTTGGCGTTCTATACATCAATCAAGATACCCTGTTCTTTGCATACATC
TTTGCCATTGTCAACAGTCTCCAAGGATTATCAATATTTGTCTTCCACTG
TGCTTGTGACCCAAGGGTTCGAAAAGCTTACCGTGATTTCTTCCTGTGTG
TAAGCGTGCGACAGAAGCACGAATTGATGAGGTCCATGTCACGAACACGT
TCCACGTCCGGATCAAAAGCTTCCATGAGGAAGAGCTTACATAGTACCAG
AGGAAACCAGtCGATGCCGTTGTATTCGAATGGTTTATCATCGACGCCAG
AGAACAGTGTTGGATTACTTGTGG
Run BLAST on NCBI

transcript from alignment at scaffold_478:394435..403926+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068008 ID=TCONS_00068008|Name=TCONS_00068008|organism=Clytia hemisphaerica|type=transcript|length=9492bp|location=Sequence derived from alignment at scaffold_478:394435..403926+ (Clytia hemisphaerica)
AAACACAACACTGCAGAAGCAAAGCAACATCTCGAAAGCATATTTGAATT CGCAAATTTTGTCCATTTCCATCTTTCCGAGTACAAAGAAAACATTTGAT AAACCAGTTGTTTTCACACAGCAGCACAGAGGAGTAAGTTTTaactggta cacaacgttgttttaacgttcaaataacgttatttgaacgttatttgaac gttatgaatgtcacacggacgttgttttgacgttgtgtgccgtcttGGGT CTTATTAGGGTTGAATTAGGGCTCGGATCCCGAATATATTCCAAAGTCAA TATAttcaagttacaagtttttgactttcagcaagaaaaaaagaatagaA TTTTGATGTAAGAACCGTCTAAAATCCGacatttagaaatttgaaaatct tcatATCTCAGCCTTGGAAAACAAATAGGCCAACAGATTTGAAGGTTTAA CTCCTGAAAGGatatttcaagtcaaaaatctcaaaccacCTGATTGCACC CCTTTATTTTTTAGATCAAAAACAACAGCGTTCCAAACTGCGTTTAGTTT ACTGGCATGAATCAATCAACACTTATCTTATCCAATAAGTAGACAAAACT AAAAATCATCATAACTACAAAAAACCGGCCATTAGAAAAGCATATTTCAT ACTTTTTTTACGGACTAACCTATCTTGACTTTTAGATCACAAACAACAGT GTTCCCAACTGCGTGTATTGGCACGAATCAACGTTCGGTAGCCATTGGTC GGATGAAGGTTGCATGGTAAACACGTGGAATGCTAGTCACGTGACCTGCC ATTGTTATCATTTAACCAATTTTGCTATTCTGATGTCTGTCACTGATGCT CCTAAACAACTTTCGGTAAGTTTTGGATCTTGCCAGCTGGATACTAACac cattgggctcttccagaaaatgttcgtacatcccgggtggaggatatatt gtccggggggtggcaaagaatcatcaaaatttgccttgtccggggtccgg gggtaatttggattgtcaactgatgcttgtgcCGGGGGTAAAACTcgttg tccggggggccaaaagttactttgtccgggggtaaatcactgaaaattgt tatatcctccacccccacatacaaactttttctggaagagcccattggaG TCTAATCTAAACAAACTTTACCTCCATTTTGCACAACCTGAATAatctag tttgagtaaagaaaacgagttttaagttaatttcatcttcaaattttcat gccatccaggatggcaatcttcagtgaacaaaaaaattacggTTACGATG TATACTAGTTTGAGTGAAGAAAACGAGTTTTAAGTTGATTTCATCTTCAA AGTTTCATACAATCCAGAatggcaatcttcagtgaaaaaaataaataaac tgaataATCGTCAAATCAACcaaaactcatttttttttaGAGGAGCCAGG GCTAAggaaaagtttctaaatttaATGTCATTgcgtttatttatttctag gaGGATAATGTGTTGGCATTGAGTTTGATCACAGTTATTGGTATCACCAT CTCTCTTGGTGCTTTGGTCATCTCTTTCCTATCGTTCGTCTTTATCAAGT AAGTGAAAGTAGCGTTAGTAGaggcacacaatgttgtttcaacattcatc taacgttatatggacgttgtgaacgttaaataaacgttgaaaaaacgttg tgtgccagctggggttaGCAGAGGCCCCCAGCGGTAACTATAATCACGAT ATCACACCATTCTCTTCtgtgtcttcaatcacgatcacgaaaatcaacaa aaagtttggataatagacctttttataaattacgtcacaaacatcacttg cctcgtattcaaacaatttccatgttGATCATACCCCTTGAGacattgaa tgatttttttatgaatagaaagtacttgtgataaaatccgctgggagtta atcaccgtggtaataatttcaaaacgaggcaagtaatgttcgtgacgtaa tttatgaaaaggtctatcatgcatgcctttgaaaaaagtccaaatcatgc atcacggctcaaaaatctttcaaatcacaatcacgttttgacctttcatc acgcaatcacgaaaaaagaaatttccaaatcacgtaatcacgctagaAAG AAGTCCCTATCACGCCATCAAGAAAACCGCTTGGGGGCCTAGTATATATA TATAGCTCTTAGTAAGCCAGATGCGTGGTGGGTCGAACAAAATTGTGGCG AACTTTAGTTTGAAACGGAGACCTCTAAAAAACTCCATGTAGTATAAGGA GCACcgatccgttagtggatgccaccGGCCTAGGCAAATTGGGGATGAAA TTTTCTACAATTTTCTACAATTTTCGACAATTTTATGACAATCTTTGCTT ATTCGATTAAAAACTGCCAATTTCGTATACGATGAGTGGATAAAAATGCG ATATCGTGCACCATAGATATGAAAAGATCATCCTCGACTGCGGTCATAAA CTTATTtactaaaaactaataaatctCTGTATTCTTTTGTGTAGGGCTAT TCGTTCCCTTCGTAACACAGTTCACAAACACCTGTGTGTTGCTTTGTTCA TCGCTGAAGGAATCTTCTTGTTCGGAATTGATAAGACTGGACACAAGGTA TGTGTTTCTATAagacccggggggggcactcatgcTAAGCGACCTACCGT TATAGATGCGGCCCTtaatctgaccattttttttccttaaaatggaccaa aatgttttgaaagataCACCCTAAGGGTTGATTTTTCGTCCAAATTTAct caattttggctattttcttTCACTGTAAGAGGCCGATTTCAATGGCCTAA TTTTGAACCATCGCGGGAGTTTTTAAATCGGGTGCCCTCATGCTAAATTT GAATGCTACGGTGATCAATACTTTTTAACCAGGTTAACTTTCAcgagatt taatttcgcaagTTTTCTTGATTAATATTTCTAATCAGCGCTTTAAAAGA TTTCGCGTTAATTTTAAGTTCGTTTTCTTTTCCAGATTGGATGTCAAGTT ATCGCAGCATCTTTGCATTACTTTTTCTTAGTTGCTTTTTTTATCATGGG GCTAGAAGGGATTGTCCTTTACATGATGCTGGTTCGTGTGTACAGGTCAA TGGGAACGTCTGGCTATGGGAGTCCGAAATTCATTGCACTCTGCTGGGGT AAGTGCCATTTCTGTAGATAGAGTTGTTTATTTTGCGTGGAtgacccatt gagtttcaagcccgaagggctagaggtcaatctctttgataggatttgaa gccaacaaatcctaccaaagttgcgcggccttgagcgacccgcctggttt ttacacaaatgacagattgaaactaaaatttaccgctNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcttaattttgaaaaatat atcactcaaaaacaaaggaattgctagattcaatccgtcatcaaaaatac ggcgcatatttaaaggcttcaatttttcttgtctgagaaaggttagagat tgacctctagcccttcgggcttgaaactcaatgggatGACCCAGTATAAT CTGAGACTTGAATGCACTATTGTGATTGTTTTCATGGGTTCAACGCCAAG CGCAGGTTCgcctatctatgaactgaattACAGATTAGTAGACGAGAACC ACAAACCCCTGGTATGggacgctgacgcctttgaccattTAGTCAGCGCT TCTTTTTTTTGATCCTCGGACTCCGAGGGTGCGTTTTAGGTCAtttggct cttccagaaaatatccGTAcatggaggatatattgtccgggggtagcgaa aaatcatcaaaatttgctttgtccggggggtaaatttgctctgtccgggg gtaatttgggttgtccggggggtcggtcaactgatgcttgtccgggggta aaaaagtcactttgtcctttgttatatccttcacccccatattcaatttt ttctggaaagccCATTTCACAGTCTAAAGAagtcatgggtaatcaggacc accgcGCTCCGATAACAACTTTCTGTTGGCTCAGAATTCTGGATGTTTTT GCATCCAACCAACGGGGGAACCCGTAATGGGgacgcaatcagtcctgatt acccatgatttaTTTTGACCATGCATTAATATAGAGTCAAGACTTCTGGT CATAGTTCTTAACCACTTGGTTAATTAAGAGGCTAACTAAATGCTTTCAA AAAAGGTATaataaaagctttttttaaaaacaaagttagaaaaaatcaac ttttcaagAAAAGAAGGCAAAGAAAGGTGTTCGAAAAATCTTTCGAGTTT GAAAACCTTTAGTAGCCGTGCCatccagttttttttttctcgggCAGTGT ATTGCGAAGCTTTAATTACGAGAATCATTATCTTCTCCTTTAATTTAGTC TTACCCTTGGTCGTCATCACAGTGAACGTTTTCATCGATCAAAATGCTTA TGGTGACATCAACGGAGCGTAAGTAACGTGTTGTGAAAATTTTCGGTAAC TCTCGggcgggaattttatacacgattaaTATCCCCTTCATCAAAACATT TCAGATGGGATGCGTGCAGCTTAAGATCATTTGAAGGTCTTAGAATAGGA GcaagaataaatattttaaatcggAACAGAAACCGAATAATGCAAAATGA TTTGTCAGACGTTTTCAAGCGAAGAGACCATCGtcgaattagaaaaaaaa attaaacaaataaaGTTAGAATTAGAGAAAGATCTGACTGTATTTAAACC AAATGTCAAACATCCGTGATTTTGTTCagcttttcaattttcataaaGAT TTCATGGGAATTTAACAGAGCACTGTTCACCTTTATTTTTAGATGCTGGT TATCGATAGAGAATGGATTTATTTGGAGTTTTGTTGGACCAGTCCTCCTC ATTGTCGGTGTAAGTCGAAATAATCTTTAGACCGTTATCCAAGCTGTAAA ACTTTTCATCTACTCAGATACTCGTAAACCCAGGGCCAGTAAACTTTTAA GCTTCGCGCAATAATTGAATCGACAAGGTACGCATGTGCTGCCATTTAAT ATTGAGATTCAAATTACTTTAGATAAATCAGAAAGACCATAAAATtccgt acatcataaaaatcattaaagcgcCGATAACGCTATCTTGCCGTCAACCG TATCTCGGCCTTGTAAACCAGGCTAGTCTAGGCTCTGATAATgatctttt atttttgttacgGCTTTGGTCTCTGTTTGAAGTAAATAAGGAGAATAAAT ATATGAGGGTAGACATATTTATTTTCAACCTTCTACCCTTACTTTTTTTG TAgatgaattttgtttttcttggaTTGACGATCAAAGTAATGACAGAGAA AGCTAAACGAAGAAATACAGCTGTCGAAGAAATCTGGTAAGCACGAAACT GACCAATACATACacatttcttataagaaaaaactattttgaaaacataa aggttcgtagaaaaaatattaagaacattgatcaggctttgtggactcta aaacacccaatttcttatgaaaataaataaagaatTTGCGAATTtaatgt tcctataaaaaagttTAGGTACTTAGCCGCCCTTaaaggtaccttttttg gacttccaaagtcccgctaagggtcggaaaaNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccccc cccccgtcagctggcaaccctagtaccccccgggcttCTGTCGCATTgat ttaaagcccgaaggactagagtagaatctctaactttactcaggcaagaa aaagtgaagctgcttatttcccattcagaaGTCGCCTAGAGCGCACCGCA TTTATGACGACGCATTCTGTCTAGTggatcctttgtttttgaggactgta tttttttaaatctagcgatgactttactttcaatccggcgttttaaaaac cacgcgcgggcatTCTGGatcatccaggagtctcgagtcctTCTTGGCTT TAAAATCGGCTGGCTTTAATGTTCTGTAGCCtcccttaaatttcaaattt aaccACCCGAAATACCTACCGATTCTCACTGAGGGTCGTCCTCACCCCAA CTAAATATCGAATGATACAGGAGAGTTGCAAATTTTCAGAACATTACCCC TCGGATCTTGCCTTATCCTTAAAGGATTTTTGTGTAAGCCTGTTATATAG ACCTCTGCCAACTTTCTAATAAAAATCTAAAACGTTAAAAGGGCTAAAAA ACACAGTTGTAAAGATccttaatttttcaatttttcaggttCTGGACGAA GGGTGTTTGTCTCTTGTTGAGCATATTGGGCGTGACATGGGTGTTTGGCG TTCTATACATCAATCAAGATACCCTGTTCTTTGCATACATCTTTGCCATT GTCAACAGTCTCCAAGGATTATCAATATTTGTCTTCCACTGTGCTTGTGA CCCAAGGGTAAGCTATAATGACATCTCTTTTTTCACAGATCCACTGAAAC AGCTTCTAACTggaaaatatcgtccccggtggaaagttTTACTCCAATCT TTGTCCCAACTgagaataatcaaataaaccaaccaatcctcactgcaaaa tattttgctatttttccgCTCGCCAACGGATTTCCTGACTTGAATATAAA ACAAATTTACATCTCCAGCCATGAAAAATATAGGAATATCAATCACCATC GAGTTGTTTcaatccgttatttttaccccaacTGGCTGGAAAATACTACc ggttctgtgagaagggggcgaTTTAGCTAAGACGGTAGGTGAACAATGAA ACATAAAAGGCAATTAGGAACAGAATTGTGCTGAATAAAGACCAAATAGA AAGGCAATAGAAATAGTTAAAAAATTACGTACTGGCACattatttgtttg aatttttttcactagTGGCAAAAACCAGAGTGTCAACgtaaaaaacatta cgtcatgaataacTATGACCTAATTTGAAtcgaattttcaaagaaaaaac acCATCAAAAAGACAACACACGAGGTTGACAGTGGTAGTTTCCTGCCGTA AAAATTTACCACGCCCATTGGTTTATCCTTGGAAGCAACACAACATCAAC TAACAACATCGACAAATAACAACTTATACAAGCAACTAGATTTTTAAGAA ATGTACAAAAACAACACCATATACATAGACGGCCTCAGATCCTTTTCATC GTCCAATATCTATAATCAATTTTGTATTACTTTCCTCTAGGTTCGAAAAG CTTACCGTGATTTCTTCCTGTGTGTAAGCGTGCGACAGAAGCACGAATTG ATGAGGTCCATGTCACGAACACGTTCCACGTCCGGATCAAAAGCTTCCAT GAGGAAGAGCTTACATAGTACCAGAGGAAACCAGGTAAAATCAGAATATt atataaatttcaaaacattgataagagctactttaggcgtacaaactttc gccagcagaaactttcgcgaggtcgaaatttgtgacatttactttcgcga atacactcttctcgagatgcataaatttattgttgtcctcgttttcaaac agatttcattgctataaaattacatattcacaatgataaatgtgttgttt acacctcattagacattttgaatttcatgtTCTTTTATTTTAGAGATAAT ACTTTcctttgggaatttaaattgatttgaatgtgataattttatagcaa tgaaatctgtttggaAACGAGGACaataataaatttatgcatctcgagaa gagtgtattcgcGAAAAAAAAGTATTTCGCGAACATAAAACATTCGCGAA tgccctgttaagaattttcaaagacatttactttcgcgaaaaaggccaaa aatcgTGAAtgtttctgctcgcaaaagtttgtacgcctaaagtactacAC GCACTACAGTATACGTTGAAAAGGTGTTCACAATATCATTTGCTAGCTCC ATTTTCAAGGATACACACAAATCCACGCATGGGATTCTTGATAAGCTGCA GTTCACTATACAATAACACTCACGCTAGTACGCACTTAATACTATACCGA TATTATcgacaaaaaaagatttgaatcTAATTTAATAGTGATGGAAAAAG TTAAGCTCTAGCTTAGACcgcccactttttgccctgcctattcaaCTTTT GAATTAAAGTTGGCTGTCTTTTTCCGCTTGTTTCTCAATCAAAGGTTTTA ACTGACGACTTTCTGCCCACTTTATGCTTACCCTGACATTTAAAATAGAC AGGGCAGAAAGATGGCAGTATAACCTAGGCTCTATGAACACGCCAAGGAT ACCCATTTTAACGTTGGATGCTTTTCGATTCTGGCCTGAAATAAGGCTTG AAATAAGTATAGCACGCACGCAATCAGAAAACTTACCTAAATatcattta tttttaacaatttcacatttttgaaactttctttttttcatatttacagC TAATTATTGGGAGGAGTAAAGAGGTAacatattcattcattcattcattc attcattcaactTATATTCATTCAACTTATATTCGTTCATATCCATTCAA TTTGTTCAAATTCATTTCTTTCACTCCGTTTCcatatacacattttttat aagcagccAAGTTGCTAAGGGTTGAGCCCTGAAATAAACGGGATGaactg gagtttttataaggctcttcactaattggtcatttgaagtaatagagatg acgcattctttagaaaaagtaatgaaattaacttaacgaccaaccaaatc acataagagcttgtaaaaactccagcttgtcccaaataaacacccctttc tcacagagcCGGTAGTATTTAATGaaatcttatgcaaaacgatGGTATCT TTTATAGGAATTTGTGCAACGCATACGAGTGCGTTAAAACCTTTCTTTAG TCTTagtcccacaatgcatcgcttttttaaaagaaaaatcaaaaactccg ataaggtctattcctCTTATAAGTTTTGAAACCTTTCCCTCCCTCAGATC CGttagaattattttttcatttttacagtCGATGCCGTTGTATTCGAATG GTTTATCATCGACGCCAGAGAACAGTGTTGGATTACTTGTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042463XLOC_042463Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068008-exon-scaffold_478-1491911889:394435..394567TCONS_00068008-exon-scaffold_478-1491911889:394435..394567Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1510915933:394435..394567TCONS_00068008-exon-scaffold_478-1510915933:394435..394567Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1575043694:394435..394567TCONS_00068008-exon-scaffold_478-1575043694:394435..394567Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1491911889:395120..395299TCONS_00068008-exon-scaffold_478-1491911889:395120..395299Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1510915933:395120..395299TCONS_00068008-exon-scaffold_478-1510915933:395120..395299Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1575043694:395120..395299TCONS_00068008-exon-scaffold_478-1575043694:395120..395299Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1491911889:395935..396032TCONS_00068008-exon-scaffold_478-1491911889:395935..396032Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1510915933:395935..396032TCONS_00068008-exon-scaffold_478-1510915933:395935..396032Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1575043694:395935..396032TCONS_00068008-exon-scaffold_478-1575043694:395935..396032Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1491911889:396979..397081TCONS_00068008-exon-scaffold_478-1491911889:396979..397081Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1510915933:396979..397081TCONS_00068008-exon-scaffold_478-1510915933:396979..397081Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1575043694:396979..397081TCONS_00068008-exon-scaffold_478-1575043694:396979..397081Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1491911889:397470..397632TCONS_00068008-exon-scaffold_478-1491911889:397470..397632Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1510915933:397470..397632TCONS_00068008-exon-scaffold_478-1510915933:397470..397632Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1575043694:397470..397632TCONS_00068008-exon-scaffold_478-1575043694:397470..397632Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1491911889:399033..399102TCONS_00068008-exon-scaffold_478-1491911889:399033..399102Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1510915933:399033..399102TCONS_00068008-exon-scaffold_478-1510915933:399033..399102Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1575043694:399033..399102TCONS_00068008-exon-scaffold_478-1575043694:399033..399102Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1491911889:399477..399543TCONS_00068008-exon-scaffold_478-1491911889:399477..399543Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1510915933:399477..399543TCONS_00068008-exon-scaffold_478-1510915933:399477..399543Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1575043694:399477..399543TCONS_00068008-exon-scaffold_478-1575043694:399477..399543Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1491911889:399938..400020TCONS_00068008-exon-scaffold_478-1491911889:399938..400020Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1510915933:399938..400020TCONS_00068008-exon-scaffold_478-1510915933:399938..400020Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1575043694:399938..400020TCONS_00068008-exon-scaffold_478-1575043694:399938..400020Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1491911889:401123..401291TCONS_00068008-exon-scaffold_478-1491911889:401123..401291Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1510915933:401123..401291TCONS_00068008-exon-scaffold_478-1510915933:401123..401291Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1575043694:401123..401291TCONS_00068008-exon-scaffold_478-1575043694:401123..401291Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1491911889:402075..402218TCONS_00068008-exon-scaffold_478-1491911889:402075..402218Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1510915933:402075..402218TCONS_00068008-exon-scaffold_478-1510915933:402075..402218Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1575043694:402075..402218TCONS_00068008-exon-scaffold_478-1575043694:402075..402218Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1491911889:403863..403926TCONS_00068008-exon-scaffold_478-1491911889:403863..403926Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1510915933:403863..403926TCONS_00068008-exon-scaffold_478-1510915933:403863..403926Clytia hemisphaericaexon
TCONS_00068008-exon-scaffold_478-1575043694:403863..403926TCONS_00068008-exon-scaffold_478-1575043694:403863..403926Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_478supercontigscaffold_478:394435..403926 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 2.92347e-06 0 0 0 0 0 0 0 0 0 0.164883 0 0 0 0 0 0 0 0 0 0 1.00188 0.988858 0 0 0 0
Blast
BLAST of TCONS_00068008 vs. Swiss-Prot (Human)
Match: AGRL2 (Adhesion G protein-coupled receptor L2 OS=Homo sapiens GN=ADGRL2 PE=1 SV=2)

HSP 1 Score: 273.478 bits (698), Expect = 1.026e-80
Identity = 154/360 (42.78%), Postives = 221/360 (61.39%), Query Frame = 2
Query:   44 LNSQILSISIFPSTKKTF-DKPVVFTQQHRGITNNSVPNCVYWH--ESTFGSHWSDEGCMVNTWNASHVTCHCYHLTNFAILMSVTDAPKQLS-EDNV--LALSLITVIGITISLGALVISFLSFVFIKAIRSLRNTVHKHLCVALFIAEGIFLFGIDKTGHKIGCQVIAASLHYFFLVAFFIMGLEGIVLYMMLVRVYRSMGTSGYGSPKFIALC-WVLPLVVITVNVFIDQNAYGDINGACWLSIENGFIWSFVGPVLLIVGMNFVFLGLTIKVMTEKA---KRRNTAVEEIWFWTKGVCLLLSILGVTWVFGVLYINQDTLFFAYIFAIVNSLQGLSIFVFHCACDPRVRKAYRDFF 1093
            +NS ++S+SI   + + +   PV+FT  H    N    NC +W+  E T   +WS +GC +   N +  TC C HLTNFAILM    A ++++ +D V  L L++IT +GI ISL  L I   +F F + ++S RNT+HK+LC+ LFIAE IFL GIDKT + I C + A  LH+FFL AF  M LEG+ LY+MLV V+ S     Y   K+  +  ++ P  V+ V+  ID  +YG    ACWL ++N FIWSF+GPV  I+ +N +FL +T+  M + +   K  ++ +E I  W  G   LL +LG+TW FG+L+IN++T+  AY+F I N+ QG+ IF+FHCA   +VRK Y   F
Sbjct:  749 VNSHVISVSINKESSRVYLTDPVLFTLPHIDPDNYFNANCSFWNYSERTMMGYWSTQGCKLVDTNKTRTTCACSHLTNFAILM----AHREIAYKDGVHELLLTVITWVGIVISLVCLAICIFTFCFFRGLQSDRNTIHKNLCINLFIAEFIFLIGIDKTKYAIACPIFAGLLHFFFLAAFAWMCLEGVQLYLMLVEVFESE----YSRKKYYYVAGYLFPATVVGVSAAIDYKSYG-TEKACWLHVDNYFIWSFIGPVTFIILLNIIFLVITLCKMVKHSNTLKPDSSRLENIKSWVLGAFALLCLLGLTWSFGLLFINEETIVMAYLFTIFNAFQGVFIFIFHCALQKKVRKEYGKCF 1099          
The following BLAST results are available for this feature:
BLAST of TCONS_00068008 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGRL21.026e-8042.78Adhesion G protein-coupled receptor L2 OS=Homo sap... [more]
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