TCONS_00068007 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068007
Unique NameTCONS_00068007
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1923

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068007 ID=TCONS_00068007|Name=TCONS_00068007|organism=Clytia hemisphaerica|type=transcript|length=1923bp
CACAGAAAAGCATCACATTGAAAATTCAATCACCAGAGGATACGCAacag
aaaaaattaatcgaCCGAAACATTTTGAATCGAGTAAAAATCGAGTTACA
ATCTGTCGAAGGGAGAAAAGAGATTGTGGTGTCTATTGGGGAAATTTTAG
CTAATATCGTTTTGGCGGATTTAAATTATTACATGATGTATGATATAAGT
GTTTCGTTTGGGAACGGGAGTCTTTATGGAAAGCCAAGTGCTGTGCTCTC
TGTTCGAACTAAAGccGTATACATGCCTCCTACTAACGTTACCGTTTTGC
ACGTAACGCATGACGCCGTAATCTTACGTATACCCCCACCGACGCAAAAC
AAGCATGACAGACGACAATTAACGTTAGTTCAAGAAAGACTGTTGACGCA
TATGAAAGTTAGAATGCAGTCTAGTGACAGTGATGTGACGAGAACTTTTA
ACGTGACTGATGACGTAGTGACTTTACGTAATTTACGTAGACTGACGTAT
TATAACGTAACGACTTCTTACGGGAATGGGAAGGTTTTTGGTGAACCGAG
TAATGTTGTTAGATTTCAAACAAAAGTTTATTTCGACAGTCCTGCTCAAG
TTGCCATCTCACAAATCGCGTACCGGACGGCTTGGGTGTCCGTGGCACTA
GGAGAAGAGAACAAAGGATATGCCACACAAATGAAGATCTTGTTAATGAT
AGAGGACGAAGTTGTAAACCAGTACCCAGTCCCCGTGTATCAAGatgtca
aattcaaaatgaaagGTTTGTTACCAAACACAAATTATACAATTACGGTA
GCCGTTGGGAATGGTCAATTGTTCAGTAATTTCACTGACAAAGTATTCTT
CAAAACTAAAGATGATCTCGATTGCAAAGATCCAAAGATCAAATGTGGAC
AAAACACCAAATGTCTTCCAACAGTTGACAAGCCTGAATTATTCAGATGC
AAATGTAACTCAGGCTATCAACCTGATGGAAATTCATCTATGGTCTGTGT
TGATATTAACGAGTGTGAGATGAATTCGGCAATTTGTGGAGAACACACTA
AATGCACCAACATTGAAGGATCTTATAATTGTTCATGTATTCATAAGGGG
TTCATGGAAAAGACAGTTGGTAAAGGTTGTAGAGACATCGATGAGTGTTC
AGACCGCGAGAAAACCGCGTGTCAAGTTGATGAGCAGTGCATCAATACTA
TTGGTTCATATAATTGCATATGTCAGCAAAATTATACACGTGTCAATGGT
GTTTGTGTTCCTAAAGAAGTGAAAATCACAAGTTGCAAATATGAAACATA
TCGAAATATGACGTGGTTCACTGCTAAAGCTGGCCAGAGAAACAAACAGA
ATTGTCCTGATGGATATGAAGGTTTCGTTTACCGTGAGTGTACAATGGAA
GGCTCGAAAGCTACTTGGGAGAAGCCTGATTCAACTAACTGTGTAAACAA
GGCCTTAGCTGTCTTGCTTAATTCACAGaaattgGAATCACCAACTGTTG
TAGCAAGTAGCCTCAACAATTTCGTTCAAGAACAAACTAATGACATGACA
ACTGGTGACGTCAGCACTATTGTTGATATGATGGGAAGTTTGGCCACTTC
TTCTAAACAAGGAGTGGACGGACAAGCTACAGAAAAATTCACTGAGaaca
tGATAAACGTTGCAAGCACACTTTTGGAGGACAAAACACAAAGTACTTGG
AATGAATTTTCTGAGGAGAAGAGGAGTGAGAAGGCAGCTAATCTACTTAC
TGCTGCTGATCATATTGTTGAAGCGAGCGCAAACGCTCTTAATGAAAACA
AAACGATTGAAAACATCGAAACTGAAAACATAGtAATGAAATTGAAACGT
GTCGAGAAGAAATCAACCGTGGACAGCGTTACAGTTAGTGATAACATTGA
ACTGCCTCGTGACGCTCTGGGAA
Run BLAST on NCBI

transcript from alignment at scaffold_478:381726..392589+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068007 ID=TCONS_00068007|Name=TCONS_00068007|organism=Clytia hemisphaerica|type=transcript|length=10864bp|location=Sequence derived from alignment at scaffold_478:381726..392589+ (Clytia hemisphaerica)
CACAGAAAAGCATCACATTGAAAATTCAATCACCAGAGGATACGCAacag
aaaaaattaatcgaCCGAAACATTTTGAATCGAGTAAAAATCGAGTTACA
ATCTGTCGAAGGGAGAAAAGAGATTGTGGTGTCTATTGGGGAAATTTTAG
CTAATATCGTTTTGGCGGATTTAAATTATTACATGATGTATGATATAAGT
GTTTCGTTTGGGAACGGGAGTCTTTATGGAAAGCCAAGTGCTGTGCTCTC
TGTTCGAACTAAAGGTAAGTACACAGCTTGCACTAGCAcagattttttat
atataaCACTAGATTGAACTACTTTGTTCCTGGCTTAAACAAAATATAAT
GCGCCATCTTGAATAATTAGACCACAGCTCGGTGCCGTAAATTTTATCGT
TTATTCTTGTTGGTATGGAAAAAAGACAGAGAAGCTCTTTCTATTGTTGT
ATATAGATATCTGTGAGCACAAGACGTTAGTTGAATATTGCTTGGACATT
TTGTAGCACGCAATACTTTTGAAAGTTCATCTAATGTTATTTTTGTCTGG
GTGTTAAATGGCGTTTCGAATCAGCTAGATAGGgtcgaatgaatgaatga
atgaatgaatgaatgaatgaatgaatgaatgaatgaatgaatgaatgaat
gtgTTTGCACGATGTATTTTATTATTGTCGTTTATCGAAAtcaaatggaa
tgaaaaaaaaaatactcatCAAATTTGTTTCCTCTGAAATTTATGTCGTa
caattttgctatttttagccGTATACATGCCTCCTACTAACGTTACCGTT
TTGCACGTAACGCATGACGCCGTAATCTTACGTATACCCCCACCGACGCA
AAACAAGCATGACAGACGACAATTAACGTTAGTTCAAGAAAGACTGTTGA
CGCATATGAAAGTTAGAATGCAGTCTAGTGACAGTGATGTGACGAGAACT
TTTAACGTGACTGATGACGTAGTGACTTTACGTAATTTACGTAGACTGAC
GTATTATAACGTAACGACTTCTTACGGGAATGGGAAGGTTTTTGGTGAAC
CGAGTAATGTTGTTAGATTTCAAACAAAAGGTAATGCTTGTTATATAGTG
TTCACCATTTAGTTTAAAACCCCGAAGGAGCTAGAGATGAGACTATTCAT
TGAACTGGAAATGAAGTCACTCGTTTTCAATCTAGAACGCgtgacccgcg
tggttttcatacaaacgcccgtttgaaagtaaaatccatcgCCAGATTTT
GAAAAGGATTCttcgtgaaaacaaagaaagtgccaGATTCAATCTGTAAT
CCAGGcttcactttctttttcttgcttgagaaagattGAAGATTCTTCTC
TAGCGCTTCAGGCTTTAAACTCTATGATAATCACCCCGGTTCTTTATTGA
ACTCGATCATCCAAGATATTCTTTGCATGCTGAAATGCTTTCAGTAATAA
ACTTTAATTTAAAATGTATATGTCTTGAGCATGTCGAGTGAAGGTGTAAA
GGCCGATGATTATCAGGGCATGTTACATTTCTTGATAGCTAAATTCAACA
TTGGTCCGGCTCAAAATAATACTCAAAAATGTAATCTCGCGGCGTTAAAT
AACTTAAGTCGCCAACCTCGTTCCCATcatttttagcttttcattCTTTG
GTTTGATTGTCCATCAGTAATGTAAATACAGCCaaccctctctaattcga
acttttattattcgaattttgTTCTAATTTGATTAAATCTTTTGTTCCTT
GAAGATCAAACCAGAGAGATATCAAGACTGTAAATTTAGTTCGTGACACA
CGGGAACGATGCTTCTTAGTTTTCACTTTCTGTGACTTTTCGATTATGAT
GATAAACCTTCATCTTGCCATTATAACTTTTTCTCAAAACCACCATAGTT
TATTTCGACAGTCCTGCTCAAGTTGCCATCTCACAAATCGCGTACCGGAC
GGCTTGGGTGTCCGTGGCACTAGGAGAAGAGAACAAAGGATATGCCACAC
AAATGAAGATCTTGTTAATGATAGAGGACGAAGTTGTAAACCAGTACCCA
GTCCCCGTGTATCAAGatgtcaaattcaaaatgaaaggTTTGGCATTTTT
CATGAAGTtgaatacacaggttgcaaaaataaagtttgaagTCAAATCat
gcttttactcgaaattttatgaccttttctgattactctgattggttcga
atttattgatacAAATATAGTAATCAAATGTGAGTTGTATatcaagtaac
atgggaataaaatcacgtgaactttttcgagtaatcacatgttttgactg
cactgctataattttgcaacccgtgtatttaACTTTagttagtttgtttg
tttgtttctttgtttgtttgattgTCTGTTTGTTTGTAATTATTATTTAT
CGTTGACATAAAAGCAAATAGCTACAAGTGGCTAATACAAGCCAACCTTT
ACAACTAAATGAAGCCGACACCCTCAATGTACCCTTTACATAATCTTCAC
GGACTTAACTCTCTAGGCGCAATGCATATAATCATATTATTATATCTAAG
ATTTGAACTTATAtttgtttataagcatatacactgcaccagagtgtatc
tcacgtatAACGTAACATAaaacggcaatgaattttgaaatctcCGTATA
ATCTTaaataaaacactagatagagttACCCTATCttttccaacccaaaa
caggtgaagcaaaataatccgtCATCTTTGCTAAAATTAGACCACAGTAG
AAGCCTTGGTTTTCACTGTTGAAGATATGTTGATACAAGaatgacttcaa
aatttcaaggatcGCGCAAGCTAAATCGTGACGTCACTttattcaagatg
gcggattatCTTGCTTCAAATAGGGAAGAAAAAAGCTCGATCtattgttt
tatataagatatctgtggccTCCGTTCTATACCATAAAATAGTGACTTTA
ACTTTAACATTTTTTATAGGTTTGTTACCAAACACAAATTATACAATTAC
GGTAGCCGTTGGGAATGGTCAATTGTTCAGTAATTTCACTGACAAAGTAT
TCTTCAAAACTAAAGGTATTTGTTTGTGTTCTAGATTTTCTGAATTGTGA
TTCTCGTGATTGCCATTTCATAGGCCCGATAAGTCCTTTGAAGTGAGGGG
CCTAAtaattttggaaagaaaattgaCGCCTACCATGGTTAGGCGATGAA
AAAAATCGTCTAGTTTTTACACCTTTCAAGACATCATAAAGTGCTAGTAT
GCAATTGAATAGAAATatagtttttatggtttttggCACTGTTCTGTCTG
CAAAAAATACGGGTGCTGTGCCCCCTGCCTTCTCCGTAGACATGGCCGAT
GAACTTTAAGCTTTATTAGACAAtcggaaaataaaaatgtaaagcgttta
aaaaaaaatgtttctcttcTTTTTACAGATGATCTCGATTGCAAAGATCC
AAAGATCAAATGTGGACAAAACACCAAATGTCTTCCAACAGTTGACAAGC
CTGAATTATTCAGATGCAAATGTAACTCAGGCTATCAACCTGATGGAAAT
TCATCTATGGTCTGTGTTGGTAAGTATTGTAGGGGATTCAAGTTTGCACC
AAAAATATCTTATACAGTAGACTAAAGCTTATCCGAACTTCTTTTATTCG
aacctttctataattcgaactaatttccaccccccccccaccaAGGGGAC
ACCCTCTTAAAACACTTACTTtgattcgaatctctctgtaattcgaacaa
ataatatTCCCTTTTCGAGTTCGATTTAGGGAGAGTCCACTGTATACTAG
ATAAAGCTACTGTCTCAGGCTGAAGGAAAAATTATGCGCAATCTTTAAAA
GTATACCACAGCCCGGCaccggcaatttgatcaataaacttttcataaat
tacgtcacgaacatcacttgcctcgttttgaaattattgtcatggtgatt
aactcccagcggattctATGTAAAattacttcctattcataaaagaatca
tttaatgtctcaagagacacaatcaccatggtaattgtttgaatacgagg
caagtgatgttcgtggcGTAATTTATGAGAAGGTCTATCAACAGCATTCG
CCTGCCTCCTTGATTTCCCATTctatttgtttgaaaaaaaaattctaagt
ttgatgatttctagaattttgcaactaatttaatgttttaatttccatga
tttttttaacaCTAATAACTGCACACATTTGTTGTTTCAGGTTTTCCACC
ATCACTGCATGAGCTTGCGCACTTTCTTACGTAATTTTCCGTTTATAACA
ACGGAATCAAAATACGTAAGACGTAACGCTGTAAACTTTTTCACCACACT
GACTGACAGACTGACTGACTGACGATATAACTATTTAGTAGTGTTAGCTT
ATTTTAGTAGTATTAACTAATATAATAGCACATTTTCTAGAATCGATAAT
TCATTGACAATGAAATTTTTTGGTTAAGAAGGATGAAATGTTTGTCACTA
TTTATTTGTTGAAGTTTATTAGTTCTGAAAGATAGTTCAACTAAATAGTT
AGTTTTTGCATCACCTATGTTCTGTGATATTTAGCCAGCACTTAGCCAGC
ACGAAGAAAAGAAACTTCCCTATAGAAGCCAAAATCCCTTTTGGTTTGTC
ACTAACAATATTCGAATATTACGAATGCTAATAGTGCACTTTTTTACATC
AGAAATTTTCTCCACATTATGCACTGTTAAAATTTTAATCTAGCCTTaag
aaaattgttatttttaaagtcgaataccaaaatacccaaaattgccaaat
aTTGATCATCCACATTGCTatgtaacacccctgtctcacagccccggtgg
aataaAATCCCCGGCAGacagggataaaaatttctatcgaaatcccaatg
gggatagaaattctattgttcccgaGCTTAAAATATCCAGTGGGGATGTT
TTGGACAGAAAATAtttgcattgaattttgaatggggatgaaatcaaagt
caatttcctggtggggctgaaattgtagggtattttgtccactggggacg
aaactttggccaaatttttcagtggggctggggtcccagcgggtctgtaa
cacaggggtgttatataaataatcctaaaatcCTACTGGTTTAAACTAAG
AAGCTCGAATTATATTGCGATTAAAAACGACGTCACTTATCCTTTTCTTC
AGATATTAACGAGTGTGAGATGAATTCGGCAATTTGTGGAGAACACACTA
AATGCACCAACATTGAAGGATCTTATAATTGTTCATGTATTCATAAGGGG
TTCATGGAAAAGACAGTTGGTAAAGGTTGTAGAGGTAAGgatttttgttt
cattctgATCAGACAGTCTTCGATACCAGCGAGGTTAAAcaagtgtttat
ttagaccgttcaatgcgatatcgtaggcctgtacataagatttcacttgc
atggtttgctttggaaagttatgtacaggcctacggtatcgcacattacg
gtcaaaataaacccgtgcttaacctcACTACTACCCAGGCTAGCACACag
cgttatttcaacgttcatctaacgctataataatggacgttgtgaacatt
aaatgaacgttgagACAACTGTTGGAAAGTACACTGGAAAAAAAGAATCT
GATATTTCGTTAACCTTGACGCCCAGTttgcacacaacgtcgtttcaacg
ttcatctaacgttttatGGGCATTGTGAacattaaatgaacgttgaaaca
actttgtgtgccaactgggacCTTAAACAAAGAATGAAGGAAGTTAAATC
CTTTGACACATTGCtctaaccactgacctttatacaGTTTAGTCTCTTTg
aatcgaacctctataactcgaatgtctccttaactcgaacaagattTTTT
ATTCCCTTTAGTTGGCAATcccttataaactttactctataattcgaaat
ttTGTGACGTTTTGAAGCAGTATACTTCTTTCTCTTTATCGATGAGCGAC
TTTCGTTTCATTCCATTTTAAATTCACGAGGgatgattttccatttttca
acttgttcagtTAAAAATATCTGCAGAAAACTTCATCCTCCATCCTCCAG
CTTTGCAAATTCaatattgtcatttttttgattttggaaataACAGGGTC
GGCCGGGCCCATAGAACAAAAAGTTAATTTCAAATATTGTGTATTCATTT
TTCGTTATTCTTCCTTTCTCAGACATCGATGAGTGTTCAGACCGCGAGAA
AACCGCGTGTCAAGTTGATGAGCAGTGCATCAATACTATTGGTTCATATA
ATTGCATATGTCAGCAAAATTATACACGTGTCAATGGTGTTTGTGTTCGT
AAGTATATTTTTAACACGTTGTTCACCGTCaaacttttataagaattaaa
aaaattatgacaCGGTGAAGTTTTATCGAAAGTATCATACAAAGGCTCAT
GACCCCCTGAATTTAAAATTTCCTTCATAGGAATTCACatagatttcaaa
aatcaataaaaaacattacaagcgaaaagtttttgtttcaaaagttatgg
tcGTTTCATACCTGGTCTGTGAGGGCAAAGATTTTCTGTTTtcctagaaa
aaaattgtaatttaaCTTCCCTGGTtatgataaaaatgataaaaattttc
atccacATTTTTTCTTTCAGCTAAAGAAGTGAAAATCACAAGTTGCAAAT
ATGAAACATATCGAAATATGACGTGGTTCACTGCTAAAGCTGGCCAGAGA
AACAAACAGAATTGTCCTGATGGATATGAAGGTAACACAGCTtgaacaca
acgttgtttcaacgttcttCTAACATTctttggacgttgtgaacattaca
taaatagcgagattatgtatgtggaattctctacggctacggttaaaGTG
GCGAGGAAAATGGcaagtaaggcaagtaatggctggtgaaagcaagttcg
atatttgacgtacggcattatgttgactttgcttatacggtgttttggtg
tttttcccgtacagaacAAAGTAGACAACAAtatgtcgcctttggtgacg
acctACATGGGCAGCCCAGCAACCGTAGctgtagaatatctccgatacat
aatctcgctaatcTTGTGTGCCAGCGGGGAACCTTTAACTTCTTTCTGTT
TTTCAACGTTCTTCTAACGTTATATTGACGTTCTTTTGGGGTTTTCTATG
CCTTTTGGTGGACTTATATTCCTTTCCAACGTACCGTCCTTTCCGATAAG
ATTTCACCTCCCAGACTAAAATTTCACTGTCACTTTCTAGCGATAAAAGA
CCccggaaaattgaaaaataagcaAGTTAGAAAGTTAGTCAGTTTCCCAA
TTCATCACATGCTATTTTCTGTAACAATCCAATTCCGAAAAATAATAGTG
AAACATCCCGGAAAATAATTGGAATCTTAGTCCCGGAATTGGACTCTTAC
CCGAAGAGACGGTATATTTATTCAGAATTCTACGCGTAGTTTCAAAAAAC
ACAGTCAATTTTCTCAACACTCGAACCTAGTCCCTTTGTTCGCTTTTTAT
GAGTGATAGCACTCAAGATagtactgaggttaagcataccaggatttgtt
tggttgaaactcactagcctgttaaattttcgttcgtcgttgTGATTTTA
CTGATTTACTTAACTTCGCTAATATCACGTCCATCAGTGAAATGTAAAAG
TGGTGcaacccagccggcacacaacgttgtttaaacgttcatctaacgtt
atatggacgttgtgaacgttagataaacgttgaaataacgttgtgtgcca
gctggtggtgcaagtggctctgggtacaaGATTAAATTGACCGTCTTTAT
ATTTTTAGGTTTCGTTTACCGTGAGTGTACAATGGAAGGCTCGAAAGCTA
CTTGGGAGAAGCCTGATTCAACTAACTGTGTAAACAAGGCCTTAGCTGTC
TTGCTTAATTCACAGGTGAGTTGAAACTATTTTGATTGTGTTTTTGTTGT
TGACGGAggtcaattctttttttacttcTTAGGCTTACTGAAGCTGTCTG
AAGCTTATGGACTCCAAGTTTAGCGTTGCTATGAATAATGATATTCAAAA
GAGTCTCATTGACAAATGTCTCTTTaaatcgaacaagttttctcgtcctt
tTACTCAACAGTGActataaaccttactctataactcgacaTTTCCTTAG
CTCATAACAAGTTTGTGCCCCCCTTGTTGGTTCGAgataaagagactcca
ctgtaataAGTGGAACTAAATTTGAGCTTTCCtttcccgtttacagaaat
tgGAATCACCAACTGTTGTAGCAAGTAGCCTCAACAATTTCGTTCAAGAA
CAAACTAATGACATGACAACTGGTGACGTCAGCACTATTGTTGATATGAT
GGGAAGTTTGGCCACTTCTTCTAAACAAGGAGTGGACGGACAAGCTACAG
AAAAATTCACTGAGGTGTGTATGCGAGGAAACTTTTCATACAAATCAATG
TGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccccc
ccccaaccccgcttattccaaatcCCCCGGcgattaggtacccaagagta
ctTATATTTTGGGCTTGTTCAGTAAAGGAATAATGTCCTAATTCGAAGAG
TCTATGATTCTAAATGGTTTTGCTCTGCCTTTACAGaagctttgtaattt
ttttttcagaacatGATAAACGTTGCAAGCACACTTTTGGAGGACAAAAC
ACAAAGTACTTGGAATGAATTTTCTGAGGTAAGAACAATACAAAACTAAA
TTCAGGttatttttcgaaagatttgTTCTCAAAATAGTCTCCTCCCCCAC
TGAACTTTGCATAAATAAAGGAAGTTCTCAATACTGGattttgatcgaag
tttttttaaagttgtACTCTAATAGTAGCACTCCTCAATAGTTAAtcaac
cctattcgtactagagGGGGTCTGTTCGGTTGGGAAACTAATAtcaatag
ctcctgaaataataataaagcttttgACCGGTGAGATCTTTCCTGTGTGA
AACCTGAATGACAATCAATACTTGACGTGCCTTCTTCGATAAGATATACT
ACTTATTGAATTTCTATCTTGTTCATTTTTACAGGAGAAGAGGAGTGAGA
AGGCAGCTAATCTACTTACTGCTGCTGATCATATTGTTGAAGCGAGCGCA
AACGCTCTTAATGAAAACAAAACGATTGAAAACATCGAAACTGAAAACAT
AGGTTAGTTCTCAATCTCGTTCCCTGTGTATAAGCGGCTTTCTATgcttg
ggcttttccagaaaaaaattgaacatgggggggggggtggagaaTGTAAC
AATTTTCATTGATTTACCCCCGggcaaagtgacttttggcccccggaCAA
CGGGCTTTACCCCCAGACAAGCATCCGTTGACCCACCAGACAatccaaat
tacccccggacagagcaaatttaccctccggacaaggcaaattttaatga
tttttcgctacccccggacaatatatcctccaacccccatgtacggacat
tttctggaagagcccctTACTGATAACGCCAACTATCCTCTGACGGCCAT
ATGtagcgtaaataaagcctgggatacaccgGGACGAGGTTTGTTATACT
TGTTATAGTTCGATTTTTTTACTTCAtcgtttgaaagaaaaaatgtctTT
TCGTTGGAAAGATGAATTTAAGTTTTTGGGGGtgaaatattgtatttttt
tgtatctGGTTTTGGGACTTATTTGCACTGTTTTTGGGGAATAACACGTT
TATGCATTCGCTctaagccaatcagattgctcttATTCTTTTGCACTATA
CGATAATACTTATTACAGTTGGAATACTGaaactttttcccaaaatttaa
gtttttttggcctatttttctttctttcttgctaCCATGTGGACACTACT
CTTCAAACATTGTAGCAAAAGGAAAGTAGCATTTTTTTTGCGTATGAAAC
CGTAGAAAATTTGACAgaattttaaagagagaaatttGAGTTGTTAAGGG
ATTCGCCTCGAGGAAATCCTAAGAGGTTtttattgtaatactcccgaaac
gatcccacaatgcatcgtNCGTATGAAACCGTAGAAAATTTGACAgaatt
ttaaagagagaaatttGAGTTGTTAAGGGATTCGCCTCGAGGAAATCCTA
AGAGGTTtttattgtaatactcccgaaacaatcccacaatgcatcgcttt
tttagaaaaatcaaaagctcCGATCTAAGATCTTTCTTTCAGAATATGAT
TTATTCTATAGAAAATTTGGATTTACTGTCGTTAAATATtgcattttctc
gaatttcttttctttattttctagtAATGAAATTGAAACGTGTCGAGAAG
AAATCAACCGTGGACAGCGTTACAGTTAGTGATAACATTGAACTGCCTCG
TGACGCTCTGGGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042461XLOC_042461Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068007-exon-scaffold_478-1491911889:381726..381989TCONS_00068007-exon-scaffold_478-1491911889:381726..381989Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1510915933:381726..381989TCONS_00068007-exon-scaffold_478-1510915933:381726..381989Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1575043694:381726..381989TCONS_00068007-exon-scaffold_478-1575043694:381726..381989Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1491911889:382494..382805TCONS_00068007-exon-scaffold_478-1491911889:382494..382805Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1510915933:382494..382805TCONS_00068007-exon-scaffold_478-1510915933:382494..382805Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1575043694:382494..382805TCONS_00068007-exon-scaffold_478-1575043694:382494..382805Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1491911889:383624..383812TCONS_00068007-exon-scaffold_478-1491911889:383624..383812Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1510915933:383624..383812TCONS_00068007-exon-scaffold_478-1510915933:383624..383812Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1575043694:383624..383812TCONS_00068007-exon-scaffold_478-1575043694:383624..383812Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1491911889:384695..384790TCONS_00068007-exon-scaffold_478-1491911889:384695..384790Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1510915933:384695..384790TCONS_00068007-exon-scaffold_478-1510915933:384695..384790Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1575043694:384695..384790TCONS_00068007-exon-scaffold_478-1575043694:384695..384790Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1491911889:385154..385294TCONS_00068007-exon-scaffold_478-1491911889:385154..385294Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1510915933:385154..385294TCONS_00068007-exon-scaffold_478-1510915933:385154..385294Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1575043694:385154..385294TCONS_00068007-exon-scaffold_478-1575043694:385154..385294Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1491911889:386928..387059TCONS_00068007-exon-scaffold_478-1491911889:386928..387059Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1510915933:386928..387059TCONS_00068007-exon-scaffold_478-1510915933:386928..387059Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1575043694:386928..387059TCONS_00068007-exon-scaffold_478-1575043694:386928..387059Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1491911889:387948..388073TCONS_00068007-exon-scaffold_478-1491911889:387948..388073Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1510915933:387948..388073TCONS_00068007-exon-scaffold_478-1510915933:387948..388073Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1575043694:387948..388073TCONS_00068007-exon-scaffold_478-1575043694:387948..388073Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1491911889:388396..388506TCONS_00068007-exon-scaffold_478-1491911889:388396..388506Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1510915933:388396..388506TCONS_00068007-exon-scaffold_478-1510915933:388396..388506Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1575043694:388396..388506TCONS_00068007-exon-scaffold_478-1575043694:388396..388506Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1491911889:389584..389690TCONS_00068007-exon-scaffold_478-1491911889:389584..389690Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1510915933:389584..389690TCONS_00068007-exon-scaffold_478-1510915933:389584..389690Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1575043694:389584..389690TCONS_00068007-exon-scaffold_478-1575043694:389584..389690Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1491911889:390022..390189TCONS_00068007-exon-scaffold_478-1491911889:390022..390189Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1510915933:390022..390189TCONS_00068007-exon-scaffold_478-1510915933:390022..390189Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1575043694:390022..390189TCONS_00068007-exon-scaffold_478-1575043694:390022..390189Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1491911889:390835..390903TCONS_00068007-exon-scaffold_478-1491911889:390835..390903Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1510915933:390835..390903TCONS_00068007-exon-scaffold_478-1510915933:390835..390903Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1575043694:390835..390903TCONS_00068007-exon-scaffold_478-1575043694:390835..390903Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1491911889:391260..391377TCONS_00068007-exon-scaffold_478-1491911889:391260..391377Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1510915933:391260..391377TCONS_00068007-exon-scaffold_478-1510915933:391260..391377Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1575043694:391260..391377TCONS_00068007-exon-scaffold_478-1575043694:391260..391377Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1491911889:392500..392589TCONS_00068007-exon-scaffold_478-1491911889:392500..392589Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1510915933:392500..392589TCONS_00068007-exon-scaffold_478-1510915933:392500..392589Clytia hemisphaericaexon
TCONS_00068007-exon-scaffold_478-1575043694:392500..392589TCONS_00068007-exon-scaffold_478-1575043694:392500..392589Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_478supercontigscaffold_478:381726..392589 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0768157	0.434825	0.426251	0.380457	0.315126	0.394534	0.208925	0.648476	0.157889	0.153202	0.175887	0.16886	1.78852	2.04667	0.330401	0.41965	2.75153	2.59657	3.7775	3.2818	7.74449	6.53685	1.25803	3.40277	3.43439	4.08723	1.14395	0.21247	0.691573	0.44215
Blast
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BLAST of TCONS_00068007 vs. Swiss-Prot (Human)
Match: FBLN1 (Fibulin-1 OS=Homo sapiens GN=FBLN1 PE=1 SV=4)

HSP 1 Score: 82.0333 bits (201), Expect = 3.579e-16
Identity = 54/131 (41.22%), Postives = 71/131 (54.20%), Query Frame = 3 
Query:  870 DCKDPKIKCGQNTKCLPTVDKPELFRCKCNSGYQPDGNSSMVCVDINECEMNSA-ICGEHTKCTNIEGSYNCSCIHKGFMEKTVGKGCRDIDECSDREKTACQVDEQCINTIGSYNCICQQNY--TRVNGV 1253
            +C  P   CG+  +C   V+ P  FRC+C +GY  DG S M CVD+NEC+     +CG   KC N  GSY CSC   GF     G+ C DI+ECS          ++C N  GSY C C++ Y  + V+GV
Sbjct:  359 ECAPPAEPCGKGHRC---VNSPGSFRCECKTGYYFDGISRM-CVDVNECQRYPGRLCGH--KCENTLGSYLCSC-SVGFRLSVDGRSCEDINECSSSP-----CSQECANVYGSYQCYCRRGYQLSDVDGV 477
The following BLAST results are available for this feature:
BLAST of TCONS_00068007 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FBLN13.579e-1641.22Fibulin-1 OS=Homo sapiens GN=FBLN1 PE=1 SV=4[more]
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