TCONS_00067990 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067990
Unique NameTCONS_00067990
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1487

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067990 ID=TCONS_00067990|Name=TCONS_00067990|organism=Clytia hemisphaerica|type=transcript|length=1487bp
aaatgtttttaatcaaaacaagtttttgtattattatttttgttctAGTA
GTATGATCAATTAAcaagatttttcataaaaaggaTGCTTATAAAGGTTT
TGTCTGCTATATGTTTTATGGCATTGGCTGGTGAAGTAAGAAACAAGATG
GCTGTGTCAAGTTctacaaatgataaaaaatttgctttgctgcaagaatt
ttttaatttagatGAGAGATTTCGTGAAACTCTTCATGCtggccttcaaa
aatttttatggAATGGAAGTGTCACAAGGAAACACCCAAATGCAAAGAAA
AATATCCAGCTTGCTGGCAGTGCTATAGAGGGTGCATCTTTGGCAAGagt
ttttcaaaagaatgaTGAGTTTCCAAGTGGTTTGAACCAAGAGATAGAAG
TGGACATTGAGTTCATGTATCTCAAGTTACCAGAATCAAAGCAAGATCTT
ATCCAAGATATTGAGGCAGATCAAGGATACATAAAAATGAAGCTTCAAGA
AGATCTGTTTGATGACATTAAAAGCATTGGTTGGAATCTTGACCAATATG
AATTTGATGAAGTTTACAAAGAGGTGAAATCTCCAGAAGGCTATTTTCTA
CcgttcaaaatcaaatcaattgcTAAGAAGAAAGTAGCTTATCGTGATGA
GAAACAAGGACTCCGTTTGATGGCTGCTGCGGTTTATAATGTTAAGAAGA
GAAATGTGGACTTCAAGCCAATTGCTAATGAGATCACAAAATCTTCTGTT
TCCTCAGAATACGTTTTAGAAGTGAAGGGTgaaagaaaacttaaaatttc
ttttgatactgTTGTGGTTGTTGGGCTATCATGGCATTCTCAAATAGGCA
ACGATTGGTTGAATAGACCTAAAAACTGGCCATCGCATGCTGTCTGTCAA
CAAATTTTGGGTTCTAGTAGTGTTGTCATTGCCAAACCATCAAGAAAAAA
TAAGCTTGACCCAAACACTACTGAAATGCGCTATGCATATTCTCAAACAG
AGCGCAAACTTGTTAAATTACGCAGTCagaatcaaaattttgtgtaCatg
gtttttaaaattatgtttGTGAAATGGGTCAAACCAATTGATAAAGAAGA
AATCAGTTCTTTCATTGCCAAGACTGCAATGTTTTGGATTGCTGAGGAAT
TTCCACCTGGAGATTCTGTTTgggatgtttttgatgataaatCCTTACTG
TTACCattgcaaattttattttcatggcTTTTAAGTGCTTTTGAGTGTGG
TTTCGTTCGTTATTACTTTAATGAGAAAGTTAACATCATTGAAGGCATGT
CTGACACGATTAgggatcaaatcaaaacaaaacttgagGGAATCGTTGGT
AATATTGGAGATTTCATTCCATCCAATATTGAAAAGGAGCTCAGAGCTGC
GGAAACCTTGTTGGGTTATCTTTCGTCTATTAAAGATACTTTATTGAAAA
TCAATTCGAAAGATTATTCAGCTCTCGTTAGCCAGCA
Run BLAST on NCBI

transcript from alignment at scaffold_478:239339..254181+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067990 ID=TCONS_00067990|Name=TCONS_00067990|organism=Clytia hemisphaerica|type=transcript|length=14843bp|location=Sequence derived from alignment at scaffold_478:239339..254181+ (Clytia hemisphaerica)
aaatgtttttaatcaaaacaagtttttgtattattatttttgttctAGTA GTATGATCAATTAAcaagatttttcataaaaaggaTGCTTATAAAGGTTT TGTCTGCTATATGTTTTATGGCATTGGCTGGTGAAGTAAGAAACAAGATG GCTGTGTCAAGTTctacaaatgataaaaaatttgctttgctgcaagaatt ttttaatttagatGAGAGATTTCGTGAAACTCTTCATGCtggccttcaaa aatttttatggAATGGAAGTGTCACAAGGAAACACCCAAATGCAAAGAAA AATATCCAGCTTGCTGGCAGTGCTATAGAGGGTGCATCTTTGGCAAGagt ttttcaaaagaatgaTGAGTTTCCAAGTGGTTTGAACCAAGAGATAGAAG TGGACATTGAGTTCATGTATCTCAAGGTATACTAACACAtctttttcaat aaactttacTTCACTTCATTTCAAGGAGAAATGACCATGTGGTTAAAAGT GTAAGCATTACACACCATAGGCTTACAGTTTGAATCCCTGCTCCTTCCAA TGTGTTGTTCAGTTCATATATAGCCCATTCAGCTGGCCATTGACCTTGTG AAAACAATCACAAGAcagtctaaaagtcctagattccTGGGCTCTCTACG TAAAATATTGACTATATTGATGCAAATCTTcttatttttacctttttact atttttttcaatttagaaaAGATTCCATCTCCATTTTATAATGCAATGGA ATGTATTAACATAGTTCCTCCCTCTCTTTCTTTAGGGGGTGACACCttct gaaaaaatgaagaaggagggggatcagaaatttgCATGAAAAAGGCGGAG gatgtagattattttcaagcactgttacgaaattttgttttttatgaaat gtaGTTTTCTGTTGAGTAGTTTGAGTCAAAAAGatgaaagaagtttatta tttcgctCGCTCTCTCTCTAAAGATAATTCACATATATACATTTGTTAGC TATCTTAAAATCTTAGgtaattgacatttttaaaggttagggTGGATGCC AAGAggggggtcagacccctttTCGTACTATGATTGAAATAAAACTATtg tttttaacaataaaaagcaACGAAGGGCTACTGGgttttttatacaaact aaatgtaaattaattaGATTAATGTCAGGATTTTCGTCAAGTTTAGTTTG AAATAAacattttgaattcatttttatttaaggaccattttgattctttt tgttttgacgtttcatattcttaaaaaataaaaaaacttaataTACTATG TGTTTGTTTCTAGTTACCAGAATCAAAGCAAGATCTTATCCAAGATATTG AGGCAGATCAAGGATACATAAAAATGAAGCTTCAAGAAGATCTGTTTGAT GACATTAAAAGCATTGGTTGGAATCTTGACCAATATGAATTTGATGAAGT TTACAAAGAGGTGAAATCTCCAGAAGGCTATTTTCTACcgttcaaaatca aatcaattgcTAAGAAGAAAGTAGCTTATCGTGATGAGAAACAAGGACTC CGTTTGATGGCTGCTGCGGTTTATAATGTTAAGAAGAGAAATGTGGACTT CAAGCCAATTGCTAATGAGATCACAAAATCTTCTGTTTCCTCAGAATACG TTTTAGAAGTGAAGGGTgaaagaaaacttaaaatttcttttgatactgTT GTGGTTGTTGGGCTATCATGGCATTCTCAAATAGGCAACGATTGGTTGAA TAGACCTAAAAACTGGCCATCGCATGCTGTCTGTCAACAAATTTTGGGTT CTAGTAGTGTTGTCATTGCCAAACCATCAAGAAAAAATAAGCTTGACCCA AACACTACTGAAATGCGCTATGCATATTCTCAAACAGAGCGCAAACTTGT TAAATTACGCAGTCagaatcaaaattttgtgtaCATGGTTTTTAAAATCA TGTTTGTGAAATGGATCAAGCCAATTGATACAGAAGAAATCAGTTCTTTC ATTGCCAAAACTGCAATGTTTTGGATTGCTGAGGAATTTCCACCTGAAAA TTCTATGTGGGATGTTGTGGATAGTGAGTGCTTGGTAACTCCCTTGAAGA AACTATTTTCTTGGCTGCTTGAAGCCTTCAGTAAAGATACAATGCCGTAc tacttcaatgaaaagtccaATATTATTGAGGGGATGTCAGATCAAACAAA GCAACTTATCATTACAAACATTGGAGAAGTTTTGGGGGATTTACAACAAT TTATACCCTCAGATATTGACCGAGAGCTTGCTGTTGCTAAAGATATCTTC ATTTGGGCAGAAAAGATGAACAAAATTTTAACATTGATAAAGGACAAGAA TTATAAAGAAGCGTTGAAGATACTaccaaaagaattgattttgGATATTA TTGCTTTTTATTTTGCTGAAATTGGCTGGGATGTCATCCATGAGAAAATT GAGAAAGAACTTGATAGGCTCATAGAGCGGGCTGAGAAAGAAATTGACCG CAGCttaaagaaagttgaaaaagaacTTGACAGGTTCACAGAGCGAGCTG AGAAAGAAATTGACCGCGGTTCAAAGACAGTTGAAAATGAACTTGACAGG CTCACAGAGCGAGCTGAGAAAGAAATTGACCGCAGCTTAAAGAAAGTCGA AAAAGAACTTGACAGGTTCACAGAGCGAGCTGAGAAAGAAATTGACCGCA GTTcaaagaaagttgaaaatgagGTTGACCGTGTTAAAGAAAGCGTGGTG AGTGAAGTCCAGAGAAGTgggaaaaaagttgaacacgaGGTTAACCATGT TAAAGAAAGCGTGGTTAGTGAAGTCCAGAGAAGTgggaaaaaagttgaac atgaACTCAAACGATTAAAACGTAGATTCAGACGATAAAGTCTCTTTGCT TTCACAATNGGGAActattttttgcgggaactaatttttgcggttcgcag ttcaagatttaatatttaatatttacgggaacttaattttgcagatttct cacttgaaagaaaattagagccgtACTGTGAATTATTCAACCTTTGTTTt tcacatttgaaaaattttacgggaacttaattttacgGTCTGAGCCTAaa tccgcaaaaattagttccttcaaaaattagtttccttaAGGTAGTCTGGA AATATatatgctatgatttcttcttttatatactAATGATGAATAACATG GTTTGGGCTGTAAGTTTGAATTTCCAAGCTCCAAACGACAGTtaaaaaca cagccaatcaaattctgttatTATTTCACTTTCTTAGAAAAGACGCAACT TTCTTTAGTTATTTTAACTTTATTAAATGatgacagcgctaaattcgaat ttcctacTGTAAATTTTTGGAGGCAGAAATCTGCATCACAGCCCTGACac gtcctgtatacatcagattataaaaatacaggactgGTTGCCTTTCTAAT TTCTTGTTTGAAAGagttatttttatgaaaagtaaTAACAATATATTGTC Tacacattttgtttttttcaagaaacacgattttaagaaacacgaggctc aaAATGCCTAAAGACTaaaaaacatctaagaaacaagctgaggctgagaa tgagaaaataacattttttaattcggttttttaagaaccaatcaaaacaa atgttttttttctttgcatgaaaaataggctgattatgtcaaaaagttta gaaacatgtaagaaacatttaaggctcaaaaggccgatttcgtaagaaac attgaggctgcttggtaaaactagtttcttaaaaaaaacaaggtGTATTT GTCCTTTGCACTCATTGATTAAACAAGAGTGACATGTGTAATTACTcaac acgtttttttctttctgacagTGTGTTTTTCTATTCAGATTCTTAGAATT CAGTGCAGTTCAGTGGGGAAATTTAAGATGACAAAATGGGCTTAAATTTC CCCTCTAAATTCTTAGAATCTTAATAGAAAAACACATTTGTAAGCAAGAA AAAAACGTGTTGAATAATTACTTATTTCCTCTGTTTTCCCTCTTTATCAA GACATTGAACACTATTAGTTATTTGGACATCTTAAACTCAAGGACTATTT AATGGATGAAAAGACAAATAGTATTTTAATAAGGCTCAACAATCATAGAT AATTGAGATAAGTAAATTTTCATAGCTTAGGGAATTCCCCACAATGTTGA AAAGGGAAGTTCCCTTAATGTTAAGTAAATAGTGAATATTCTACTGTTCG ATGTTTATCACTCAGtttttgataacaaaaatcataataaaaGATTTCCT TATCAGactgtttttctttgattttttgacattaaaggttttgtttttaa ataagagtgatatcatttgcttactcatcaattctaattcacaagctttt tcgcattggattgacacgtatgtggagcaagatttgtcagaaagaggaaa agaaaaacattttttgcttacatcatcacaatataacaatagcaagactg tctgatatgaaatatgtgtctgaaatgaaacgaaaacacttatgtaaaaa caaaacctttgatATAAATAGCTGTATGATAAGTCCTTTAATTCAGATTA AAACTAAGAATGGCAGctgcaaattttgaaaaagaaacaacTTTTTCTAC TTTTCAAGAGCTTTTTGAATTAGATGAACGTTTTCGAAAAGCATTACATG CtggccttcaaaaatttttatggAATGGAACTGCCACAAAGAATCATCCA AATGCAAAGAAGAATATTCAGCTTGCTGGCAGTGCTATAGAGGGTGCAAC TTTGGCAAGagtttttcaaaagaatgaTGAGTTTCCAAGTGGTTTGAATC AAGAAATTGAAGTGGATATCGAATATTGTCTCTTTCAGGTATAAACTTgc atatttttaattattttaaaagCTCTTTAAATGTCTAATTTCACTACTTG CTTTCATTTATTAATTCTTTCTATTTCAATCTTCCATCTTCCCTCctagc ggtttgcgtgaatgcatgaatgGGCATTTTCTTCCATATATTATAAAAAG CAAACAAATTACCATAAATAACAttattttaaagtattttttagttcttt atAAGGATTCATTCCAAGTGTtcacaatatattgaaaattataaaTACAA CTAAATTACTAGcactattttcaatattttaataaTATGAAGGGTAGATG TGGCACttagaatttttggaaaataattttataaataaacCTTTGAAAAT TAGTTAACTAtgtttattttgcaaatttttgtttAGATACCAGAGGATAA GAAGCATTTGGTAAAAGAAATCGATTCTGAACAGGGCTTTGTTCAAATTG AGTTTACAAAAGATCTAATCAATGATAGCATATCAATTGGCTGGAATGTT GACAAAGaagattttgaagaatattATGGAGAATTAATTTCACTCGGTGG ATTTTTAAAGCCATTTAGAGCGAAACAAATTGCTCAACAGAAAGTAGCAT TTCAAGATGTCGACAACGAATACCCTTTGCTTTTTGGTGCAATGTTTGGT GTTCCGAAATGTGATATTAAAGTTGAGAATCTCGCTTGCGAAGTCACCAA ATCCTCTGTCGCGTCCGAAATCCTTGTTAAGGTAAAAGAGGAACCAAagc tcaaaatttcttttgatactgTCATTATTGTGAAATTGGCCTGGCAGTCT CAAATTGCCAAGGACTGGTTGAGGAGACCAAAAAACTGGCCATCATACGC TATTTGTGAGCAACTCATGAAATCTGGAAGTTATGTTATTCCCAAACCGT CAAAGAAAAACAAGCTACATCTGGATACCACTGAAATGCGTTATGCTTTC TCTCAAACAGAGCGCGAACTTGTTAAATTACGCAGTcagaatcaaaattt tgtttacatGGTTTTTAAAATCATGTTTGTGAAATGGATCAAGCCAATTG ATACAGAAGAAATCAGTTCTTTCATTGCCAAGACTGCAATGTTTTGGATT GCTGAGGAATTTCCACCTGGAGATTCTGTTTGGGATGTTTTTGATGAAGA TTCCTTACTTTTACCattgcaaattttattttcatggtTGTTGAGTACCT TTGAGAGTGGTTTCGTTCCATATTATTTTAATGTGAAGATCAATATCATT GCTGGAGTATCAGGAATGACCAAGGAGTTAGTTATCACCAAAATGGAGGA AATTTTGAATGATATGAGACAGTTCTTACTATCAGACATGCATCAAGAAC TTGAACTCTGCAAAGATGTTACGATCAAGGTAGACAATTTTGGTCAAATA TTTACaatgataaaaaacaaagactacATAAGTCTTTTACAACATCTTCC ACCCGAATTGTGTTTGGACGCCCTTAAacatttcaatgaaaatccTAGAA AATATGAAAGATATACTGCTGCAACAGAAGAAAATGATAAAGAAagtttt aatgaaaatgtaaaTGTTGTTGTTGAAAATGAAAACTGCTCCACAACTCA AGAAATTGAATATGaagtaaaagaatttttcaagaaatttcatcAATAAA ACTTTACTTTGGACGTTTGTTATCATTTGAGCATCGAACAACAATCCCTT ACAGGGTGGTGGTGTATTTTTGCTCTTGAAGCCGTAAAAATAAATGTCAA AAACATTACACTCTGAGTGTGTGTGCAGACTTCACGCTtgtagtggggtc gtttagcataatttacgggaaaacaataagatctagctgaaactttctcc agaccttctctataggatggttatgcctcaggaaaaattcccctaaaatc ccactggtggaacatcccttttttgggaaatttctttttttcccaggcaa aaccctaagggcgaaatttttagaaaatttcaaactcattttcagacatt atcaagtataccattcgaaagctctcgaaaaactatatagacgactttta aacgggtatagccgatttcattacctaactcaagataattcacgcagaag atgctatttatggtcaattttgaccaaagtgtggcGAANTCAAGGTAGAC AATTTTGGTCAAATATTTACaatgataaaaaacaaagactacATAGGTCT TTTACAACATCTTCCACCCGAATTGTGTTTGGACGCCCTTAAACATTACA ATGAACATCCTAGAAAATATGAAAGATATACTGCTGCAACAGAAGaaaat gataaagaaaattttgatgaaaatgtaaaTGTTGTTGTTGAAAATGAAAA CTGCTCCCTAactcaagaaattgaaaatgaagtaaaagaattgttcaaga aatttcatcaataaaattttactttggACGTTTGTTATCATTTTGAGCAT CGAACAACAATTCCTTACAGGGTGGTGGTGTATTTTTGCTCTTGAAGCCG TAaaaacaaaatgtcaaaaacattACACTCTGAGTGTGTGTGCAGACTTC ACGCTTGCTCTTTTTCCTGAAGATATGGCTGCTCATTTGGAAAGAAATCC TGGAGTTTCTTTTGATCCTTCCTGGTTCCAGgatatcaaaattaattttc ctgGTGTTAAATTGAGAGCTGAGTGTGTGTGCTaaacttgcttcattttc aCAAATAATGTTATTCGTatgaaacaagaaatttttaattttttattttt agcattGGTACTtgagatttttgattttgattgatttgattttcgaTTAT TATGCTTTGCGTACAAGCCAAAACCAATATAGTGGTCAATGTTAATGATA ACAGAGCTTTatactagtttgagtaaagaaaacgatttaagtttatttta ttaaatcactttctttactcaaactaaagtctgtccagatataattggca gtggaaacaagaatgcctgtaacttttgatagtcaaatataattatggaa attttttttgcttgttttaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattcgcgattttta gtggttaaatttgcgattgcaaaaattgagctttttttctactcatgcta taacgttcatttttacaccagtggtactTCAACCTTAGGCTAAGAAGTTT CTTAAATGttaaggcaaacagaaaagtccttcggaagatatgggatataa attttataaattttattgagtttttatgaaattttcaagtttctgTTTCT TTACAGCCCGGCGCAACTACTTAGTTGTGCtattacattctttttcaatc ggtcggagaaaatgtggaatttttcctccaaaattgactaattttttgcc aattttaccaaagaattggccttttatcacaatttcctacccttacagtg cagttcagtgcagttttgtaatttcctacccttacagtgcactagctgag CTATGAAAAACCTACCCTTAAGGGCCGAACGTCTGGTAGGTCATTTACCT TGAGTGCCCCCCCCGGGCTTGTTCTTAATATTTTGGCCATCGAAGCCTTA CGTTCTTATAGAGTTCGTTCTTATAGAAAAAAAAACGTTTGTATATTTAT AGTTTGTAACAAACTTATTGATACAATGAATCATTGCAACTCAAAATATC ATACATTTCTTTTATAAATCTTTTTTTTGGATTTTGCCTACCTTTGCCTG AAAAAAGTCTCAAGAATTACCAATAAACGAATTTTGATGACCATtttttt tttttttcagtcccTACACGTTTCttattaggggggggggtcaacctGCC GGGTACTAAGTATAACCAAACTGTTCCCCGTACGTTCCCCGTACGTTTCT TATTTTACTTCCTTCTCTATTTTCATTCTATAtttatcattaggtaggtc caatatGCATTGAGCTTGTTTTTTAGATTCATTCAGGTTATATAGCTTGT TTTTCTTGATAGttcagaaaaaatataaagttttcacGGATGGGCTGAGG TTTGAGCAGCCCTTGTTTGTTGTAGTCTTGTCAAAAATTAAGctgtttat aaaattatttttgaatttacgGAAAAGGGCATCTGAAAGAAAAGGTGTTG TCTCATATTAGAATGttgtttttaattaaattgttaattgtttttctctt tcagattattaagaaaaaataaataaacaaaactgaATTGAAAATATCAC CAAACAAAAGGGAATACAATGGAATGAAATGGAATTTAATAGAATCTCAG TATTCTTTTGTTTCTAATATAAATATACAgaggagtctccataactcgaa cacacacggAGAACACAATATTGTcagagttaaggaaatttcgaggtACA GAGTAAGATTTGCTAAACACTTCTAGGTCAGAAAACTGATTTTGGACATA TCAACAAAATGTGTAAACTGTCGATGAAAAGCTTCAACTGTGTTCAAAAT TGAGGTTTTCTGACCTAGTGCTGAACTGGAGGAATTGcttattttaggaa tttttttatggGCCACTGTGGACGTGGATCATTTTTTGTTCAGTTTTTCT TCATATTCTTCCAGGTTTATTCGCTTTAATCATTAATCTTTCATATCTAG AATGATAACAAAAGATAAAATACTACAACATCTTTACGTCAAGTCACAGG CTATCAAAGACGAAACCTTTTACAGAAATCTTCaaacattattattataa aaGACACtcacaaaatttataaaaataagatGTCTACGCCAAGTCAAAAG TTATCGAAGATGAAAACGACCTACAAAGACCTTCAAAGATTTTATAAATT GGACCAAGAATACATCAAAACACTTTCAGACTGTTTAAGACTGGTTATGC CGGTatctaaaatttataaaattcatCCTAACCCTatggaaaatatttct ttagcTGGAAGTTCGGTCGAAGGTGCTGCTCTTACGCGATTATTTGAAGC GAGTAAAGATTTTGAAGATGGGGTCAATCAAGAAATCGAACTTGATGTAG AAATGATAATATGTCaggtatttttctttgctttgcatagtttctagagg ggtcaagacccccacccttaggtaagaggaccccccccctcccttaagtg ctaacccccccttaagaaattcatttaaaatttcacgattgtacaagagt cataatttcgcataattcaaggaagatccccccttatctaagaagacccc ccttaggtaagaagaccccccttaactggcaacccccccttaggaaagtc atacttttaacacccccttgcttttggttcatcaaaacccaagacccccc ccctaaatgtagtggggggtagaaactatgcTTTGTCAGGTTTTTTATGT AAACAACAGAATCAGgagcaaaaaagttaattttttccatttcctGTTGA CGTATAGGATGGAAAGTAATGCAAAATCTATTTGAGAATCTTTTTGATCA AAAATTGCGATGATAAAACTGATAAAAAACTTCACACTTTCTTTTGACGT TAGAAAAAGCGTCCGTTACGCGCAAAGCCGTTGCAGTTTTCTGTACTGTG TGTCCAAAAAgaacagatgagatggagtttttataagatactttaataat tggtcatttgaagtaataaaaatgatgcgttctttagaaaaaaggatgaa aattttttattactGGTGAACGactaaccaaatcaaataaaaacttgtaa aaactccatctcgtcccaaaaAGAAACGAAACAAAACACCCTAATTAGTT AAGCacgttttttataggaacatccaacatttttgaagtctttatATGTG ATTTAGATTTTAGATGGGCGGAGGGGttagaaaaatctcaaaacttaata agcttttgaataaaaatgtcctgggtggaaaatttttgaaaaattaatta gcgggggggggggggggggttttcaaaatcaaaaaaaaatttttcaaaaa aaatgtccgggggggaaaattttttaaaaattaaaaaggggggggggggg ggcggctattagatACCAGAAAgtacttttcaagaaaaatcttttgaatt cTACTTGTTTTTCTAGATACCCATGAAGTTACAAAACAGAGTGCATGAAA TCAATCCCGAACAAGGTTACGTCAAGATTGAACTTGTTCGTGATATTTTA CATGAGTTCAAAACCAGTGGCTGGAACTTTGACGAAGAGTTTATTGACAG ATGTGTTGAGACTTTCAAATCACCGGATGGGTATTTTCAACCTTTTCAGG TTTGTGTATCAGAGTAAATGAAAGTGGAAAGTGTAAAGCAATAAAATAAC GTTTTTCGACTCCCTTCAAGGTTTCTTTGTATACTTAaatgggattaatt tttgcggtgaCTTTAATTTCACGGATGATTCTatttaagaaaagaaaaaa gaaaaaacaacttttttttggcACCGTGCgaactcaaattttgaaaaatt ctatttattttgctttgtcagcatagagaCGTGCATCCTTGTAAAAATGT ACATATATCTTTAAACTTTTCTAGGAACAATCACTGACCTTTACATATCC CTGGACCTTACTCaatgccggccaagcaaaatattttgattggagttttt ttttaaattggtacccgcaaagagAGCGCTGTTGAATAGTAAATAATTGA CTCACCAGATATCAGCGTCTTCTCCAAGAGATAGATCGAAGATCATACAA GCCACTGGAATGCGTGCTGCAATAACGCCAATCAAAAGATATGAAAACAG GAAGCCAGCAAATACCAACAGAaacgatcaaagatggcggatatagcttg gtccagggatatataaaggtcagtgggaaCAATGACTAAAttgaaatctt ttcaaaatcttttgaaagattAAATCGTTGGTCAAAGGCGAAGCAGAATA TGGAGACAGGGGTGGTTTATTGCTGTTAGCTGCTTCAGTTTTTGGAGTCA ATGTCAGTGATGTCGAGATCAAACAAGCTGGGGATGAGGTAAATTACAGT GTAAATTACATAGAATTATCCCGaaatatattgtactctttgttgtcttt gttggacctaccccggtggaggtcctataaattaacctgtgtttgttcgt ccgtccgtccgtccgtccgtccgtccgttcgttcgttcgttcgttcgttc gtctgttaccaacttttctcaggattgaatcataggaatcttttgatttt tggtacaaaggtgcaaaatagtggtgggcaaaatgtgacggagcccgatt ttcgaaaaaaaaattttttgggcggatttgggccaaaaaacggctaaaaa acggtttttttggactttgtgaaaaattggatcattaattttttctgatt ttttgcattaaagtagggtaccatcataggtaaaagatgactcAAGCAAA TTgttgtaaaaaaattttgttggcttaaaaaacgcatgtttatctataag aatcactattaataagcatacatcaatgttcttagtcaaattactcaata tttttacaagatagatgtttttttttgctcatgagggcttagttttgaag aatatgtgtgtttagacaggaaattttggttgctcggcgtgttcttatag aaaaactggccaaattcgatattttttataagcacattatcaattactta ggtattagttttttctcgagattggctctttcattctttatgattttttg cacaaagattcataactataaaccctcgaatgtaacggagcccaattttc gaaaaaaaatgtttttgggcaaatttggaccaaaaaacggctaaaaaaag gattttttggactttgtgaaaaattggatcattagtaattttttctgatt ttttgcatgaaagtagggtaccatcataggtaaaagatggctcaagcaga tttttgcaaaaaaatcttGTTGGTTCAAAAAACGcttgtttatctataag aatcactattaataagcatacatcaatgttcttagtcaaattactgagat agatgtttgtttttgctcacgaagtcttgaatatgaaagaatatttcaag agcatgaaatttttgtttctaaacgtcttttttataagaaacaaacgact aattttaatagatcgtcactatttgtgttctgaatgattgtttaatggtc acgtcacatagatatcaattataaatgtgttaaatgcataaccaggtagg tccataaaggtatcacttgtttaaaatcaatttgattCATAGTGTGTAGA GGGAATGAGTCTCAACCCCCACTTTCATTCGATTCTGCCTATGTATATAC ATCCCCCTATAAATACTACATCGTcactatttttgaaatatcaagAGCTA TGATTGAAtccgaaaatgaaaaatggggcttttccagaaaaaatttgaat atggggggtggaggatataacaattttcagtgatttacctcccggacaaa gtgacttttggcccccggacaacgggttttaccccccggacaagcatcag ttgaccctcCGGataacccaaattacccccggacagagcaaatttacccc ccggacaaggcaaattttgatgatttttcactaccccccagacaatatat cctccacctccatgtacggacattttctggaagagcccatggCATCAAAC CCCAATTTATTAAAACTGATCACATAAGAGATCTCCTGATTCGGCTGACA CCATAGACTTATAAAGCCCGATAGGCTAGATGTCAAGCTTTTGCTggaaa gtgtgccgtggttaggtaggaaatcctacctaagtcacgtgacattaaaa tagaatttcagcgcttgaccaatcagaagcttcgcggattttcgaaaaca ataacaacaataattttttccgatattcaattttttttgcctgcaNcgcg gattttcgaaaacaatagcaacaatattttttccgatattaaATTTTGCC TGCAATGGCTTAAAgcccgacatctagcccttcgggcttataaatCTATG GCTGAGACATTTGAGGAAACtatggttttatttttaaggtAACCAAGTCA TCAGTCAAATCGGCTTATTTTGTTAAGTCGCACGGTCGTAACATGCTGAA AGTGTCTTTAGACCTTGTTGTATTGCTCAAGTTAAGTTGGCGCCCCGATA TCGTAAAATCTTGGTTTGAAAGATCGAAAAATTGGCCTAATGATTTTGAA TGTGAAAAGCTGTTAAGCTCGGGTATCCGTGTTATACCTAAGCCATCAAG GAGAAATAAACACGATGAGAACTCTACTGAAATGCGTTATGCTTTTTCAC ATATTGAAAGGAAATTGGTCAAAATGCGAAGCCCAGAACAGAACTTTGTG TACatggtttttaaaattatgtttGTGAAATGGGTCAAACCAATTGATAA AGAAGAAATCAGTTCTTTCATTGCCAAGACTGCAATGTTTTGGATTGCTG AGGAATTTCCACCTGGAGATTCTGTTTgggatgtttttgatgataaatCC TTACTGTTACCattgcaaattttattttcatggcTTTTAAGTGCTTTTGA GTGTGGTTTCGTTCGTTATTACTTTAATGAGAAAGTTAACATCATTGAAG GCATGTCTGACACGATTAgggatcaaatcaaaacaaaacttgagGGAATC GTTGGTAATATTGGAGATTTCATTCCATCCAATATTGAAAAGGAGCTCAG AGCTGCGGAAACCTTGTTGGGTTATCTTTCGTCTATTAAAGATACTTTAT TGAAAATCAATTCGAAAGATTATTCAGCTCTCGTTAGCCAGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042457XLOC_042457Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067990-exon-scaffold_478-1491911889:239339..239764TCONS_00067990-exon-scaffold_478-1491911889:239339..239764Clytia hemisphaericaexon
TCONS_00067990-exon-scaffold_478-1510915933:239339..239764TCONS_00067990-exon-scaffold_478-1510915933:239339..239764Clytia hemisphaericaexon
TCONS_00067990-exon-scaffold_478-1575043694:239339..239764TCONS_00067990-exon-scaffold_478-1575043694:239339..239764Clytia hemisphaericaexon
TCONS_00067990-exon-scaffold_478-1491911889:240652..241272TCONS_00067990-exon-scaffold_478-1491911889:240652..241272Clytia hemisphaericaexon
TCONS_00067990-exon-scaffold_478-1510915933:240652..241272TCONS_00067990-exon-scaffold_478-1510915933:240652..241272Clytia hemisphaericaexon
TCONS_00067990-exon-scaffold_478-1575043694:240652..241272TCONS_00067990-exon-scaffold_478-1575043694:240652..241272Clytia hemisphaericaexon
TCONS_00067990-exon-scaffold_478-1491911889:253742..254181TCONS_00067990-exon-scaffold_478-1491911889:253742..254181Clytia hemisphaericaexon
TCONS_00067990-exon-scaffold_478-1510915933:253742..254181TCONS_00067990-exon-scaffold_478-1510915933:253742..254181Clytia hemisphaericaexon
TCONS_00067990-exon-scaffold_478-1575043694:253742..254181TCONS_00067990-exon-scaffold_478-1575043694:253742..254181Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_478supercontigscaffold_478:239339..254181 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 1.19194 0.376976 0 0 0.236385 0 0 0 0.167797 0 0.0618107 0.173211 0.470605 0.261862 0.157555 0.442986 0 0 0 0 0 0.132683 0 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067990 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top