TCONS_00067989 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067989
Unique NameTCONS_00067989
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1948

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067989 ID=TCONS_00067989|Name=TCONS_00067989|organism=Clytia hemisphaerica|type=transcript|length=1948bp
aaatgtttttaatcaaaacaagtttttgtattattatttttgttctAGTA
GTATGATCAATTAAcaagatttttcataaaaaggaTGCTTATAAAGGTTT
TGTCTGCTATATGTTTTATGGCATTGGCTGGTGAAGTAAGAAACAAGATG
GCTGTGTCAAGTTctacaaatgataaaaaatttgctttgctgcaagaatt
ttttaatttagatGAGAGATTTCGTGAAACTCTTCATGCtggccttcaaa
aatttttatggAATGGAAGTGTCACAAGGAAACACCCAAATGCAAAGAAA
AATATCCAGCTTGCTGGCAGTGCTATAGAGGGTGCATCTTTGGCAAGagt
ttttcaaaagaatgaTGAGTTTCCAAGTGGTTTGAACCAAGAGATAGAAG
TGGACATTGAGTTCATGTATCTCAAGTTACCAGAATCAAAGCAAGATCTT
ATCCAAGATATTGAGGCAGATCAAGGATACATAAAAATGAAGCTTCAAGA
AGATCTGTTTGATGACATTAAAAGCATTGGTTGGAATCTTGACCAATATG
AATTTGATGAAGTTTACAAAGAGGTGAAATCTCCAGAAGGCTATTTTCTA
CcgttcaaaatcaaatcaattgcTAAGAAGAAAGTAGCTTATCGTGATGA
GAAACAAGGACTCCGTTTGATGGCTGCTGCGGTTTATAATGTTAAGAAGA
GAAATGTGGACTTCAAGCCAATTGCTAATGAGATCACAAAATCTTCTGTT
TCCTCAGAATACGTTTTAGAAGTGAAGGGTgaaagaaaacttaaaatttc
ttttgatactgTTGTGGTTGTTGGGCTATCATGGCATTCTCAAATAGGCA
ACGATTGGTTGAATAGACCTAAAAACTGGCCATCGCATGCTGTCTGTCAA
CAAATTTTGGGTTCTAGTAGTGTTGTCATTGCCAAACCATCAAGAAAAAA
TAAGCTTGACCCAAACACTACTGAAATGCGCTATGCATATTCTCAAACAG
AGCGCAAACTTGTTAAATTACGCAGTCagaatcaaaattttgtgtaCATG
GTTTTTAAAATCATGTTTGTGAAATGGATCAAGCCAATTGATACAGAAGA
AATCAGTTCTTTCATTGCCAAAACTGCAATGTTTTGGATTGCTGAGGAAT
TTCCACCTGAAAATTCTATGTGGGATGTTGTGGATAGTGAGTGCTTGGTA
ACTCCCTTGAAGAAACTATTTTCTTGGCTGCTTGAAGCCTTCAGTAAAGA
TACAATGCCGTActacttcaatgaaaagtccaATATTATTGAGGGGATGT
CAGATCAAACAAAGCAACTTATCATTACAAACATTGGAGAAGTTTTGGGG
GATTTACAACAATTTATACCCTCAGATATTGACCGAGAGCTTGCTGTTGC
TAAAGATATCTTCATTTGGGCAGAAAAGATGAACAAAATTTTAACATTGA
TAAAGGACAAGAATTATAAAGAAGCGTTGAAGATACTaccaaaagaattg
attttgGATATTATTGCTTTTTATTTTGCTGAAATTGGCTGGGATGTCAT
CCATGAGAAAATTGAGAAAGAACTTGATAGGTTCACAGAGCGAGCTGAGA
AAGAAATTGACCGCGGTTCAAAGACAGTTGAAAATGAACTTGACAGGTTC
ACAGAGCGAGCTGAGAAAGAAATTGACCGCAGTTcaaagaaagttgaaaa
tgagGTTGACCGTGTTAAAGAAAGCGTGGTGAGTGAAGTCCAGAGAAGTg
ggaaaaaattgaacatgaACTCAAACGATTAAAACGTAGATTCAGACGAT
AAAGTCTCTTTGCTTTCACAATNGGGAActattttttgcgggaactaatt
tttgcggttcgcagttcaagatttaatatttaatatttacgggaacttaa
ttttgcagatttctcacttgaaagaaaattagagccgtACTGTGAATT
Run BLAST on NCBI

protein sequence of TCONS_00067989-protein

>TCONS_00067989-protein ID=TCONS_00067989-protein|Name=TCONS_00067989-protein|organism=Clytia hemisphaerica|type=polypeptide|length=565bp
MLIKVLSAICFMALAGEVRNKMAVSSSTNDKKFALLQEFFNLDERFRETL
HAGLQKFLWNGSVTRKHPNAKKNIQLAGSAIEGASLARVFQKNDEFPSGL
NQEIEVDIEFMYLKLPESKQDLIQDIEADQGYIKMKLQEDLFDDIKSIGW
NLDQYEFDEVYKEVKSPEGYFLPFKIKSIAKKKVAYRDEKQGLRLMAAAV
YNVKKRNVDFKPIANEITKSSVSSEYVLEVKGERKLKISFDTVVVVGLSW
HSQIGNDWLNRPKNWPSHAVCQQILGSSSVVIAKPSRKNKLDPNTTEMRY
AYSQTERKLVKLRSQNQNFVYMVFKIMFVKWIKPIDTEEISSFIAKTAMF
WIAEEFPPENSMWDVVDSECLVTPLKKLFSWLLEAFSKDTMPYYFNEKSN
IIEGMSDQTKQLIITNIGEVLGDLQQFIPSDIDRELAVAKDIFIWAEKMN
KILTLIKDKNYKEALKILPKELILDIIAFYFAEIGWDVIHEKIEKELDRF
TERAEKEIDRGSKTVENELDRFTERAEKEIDRSSKKVENEVDRVKESVVS
EVQRSGKKLNMNSND
Run BLAST on NCBI

transcript from alignment at scaffold_478:239339..242372+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067989 ID=TCONS_00067989|Name=TCONS_00067989|organism=Clytia hemisphaerica|type=transcript|length=3034bp|location=Sequence derived from alignment at scaffold_478:239339..242372+ (Clytia hemisphaerica)
aaatgtttttaatcaaaacaagtttttgtattattatttttgttctAGTA GTATGATCAATTAAcaagatttttcataaaaaggaTGCTTATAAAGGTTT TGTCTGCTATATGTTTTATGGCATTGGCTGGTGAAGTAAGAAACAAGATG GCTGTGTCAAGTTctacaaatgataaaaaatttgctttgctgcaagaatt ttttaatttagatGAGAGATTTCGTGAAACTCTTCATGCtggccttcaaa aatttttatggAATGGAAGTGTCACAAGGAAACACCCAAATGCAAAGAAA AATATCCAGCTTGCTGGCAGTGCTATAGAGGGTGCATCTTTGGCAAGagt ttttcaaaagaatgaTGAGTTTCCAAGTGGTTTGAACCAAGAGATAGAAG TGGACATTGAGTTCATGTATCTCAAGGTATACTAACACAtctttttcaat aaactttacTTCACTTCATTTCAAGGAGAAATGACCATGTGGTTAAAAGT GTAAGCATTACACACCATAGGCTTACAGTTTGAATCCCTGCTCCTTCCAA TGTGTTGTTCAGTTCATATATAGCCCATTCAGCTGGCCATTGACCTTGTG AAAACAATCACAAGAcagtctaaaagtcctagattccTGGGCTCTCTACG TAAAATATTGACTATATTGATGCAAATCTTcttatttttacctttttact atttttttcaatttagaaaAGATTCCATCTCCATTTTATAATGCAATGGA ATGTATTAACATAGTTCCTCCCTCTCTTTCTTTAGGGGGTGACACCttct gaaaaaatgaagaaggagggggatcagaaatttgCATGAAAAAGGCGGAG gatgtagattattttcaagcactgttacgaaattttgttttttatgaaat gtaGTTTTCTGTTGAGTAGTTTGAGTCAAAAAGatgaaagaagtttatta tttcgctCGCTCTCTCTCTAAAGATAATTCACATATATACATTTGTTAGC TATCTTAAAATCTTAGgtaattgacatttttaaaggttagggTGGATGCC AAGAggggggtcagacccctttTCGTACTATGATTGAAATAAAACTATtg tttttaacaataaaaagcaACGAAGGGCTACTGGgttttttatacaaact aaatgtaaattaattaGATTAATGTCAGGATTTTCGTCAAGTTTAGTTTG AAATAAacattttgaattcatttttatttaaggaccattttgattctttt tgttttgacgtttcatattcttaaaaaataaaaaaacttaataTACTATG TGTTTGTTTCTAGTTACCAGAATCAAAGCAAGATCTTATCCAAGATATTG AGGCAGATCAAGGATACATAAAAATGAAGCTTCAAGAAGATCTGTTTGAT GACATTAAAAGCATTGGTTGGAATCTTGACCAATATGAATTTGATGAAGT TTACAAAGAGGTGAAATCTCCAGAAGGCTATTTTCTACcgttcaaaatca aatcaattgcTAAGAAGAAAGTAGCTTATCGTGATGAGAAACAAGGACTC CGTTTGATGGCTGCTGCGGTTTATAATGTTAAGAAGAGAAATGTGGACTT CAAGCCAATTGCTAATGAGATCACAAAATCTTCTGTTTCCTCAGAATACG TTTTAGAAGTGAAGGGTgaaagaaaacttaaaatttcttttgatactgTT GTGGTTGTTGGGCTATCATGGCATTCTCAAATAGGCAACGATTGGTTGAA TAGACCTAAAAACTGGCCATCGCATGCTGTCTGTCAACAAATTTTGGGTT CTAGTAGTGTTGTCATTGCCAAACCATCAAGAAAAAATAAGCTTGACCCA AACACTACTGAAATGCGCTATGCATATTCTCAAACAGAGCGCAAACTTGT TAAATTACGCAGTCagaatcaaaattttgtgtaCATGGTTTTTAAAATCA TGTTTGTGAAATGGATCAAGCCAATTGATACAGAAGAAATCAGTTCTTTC ATTGCCAAAACTGCAATGTTTTGGATTGCTGAGGAATTTCCACCTGAAAA TTCTATGTGGGATGTTGTGGATAGTGAGTGCTTGGTAACTCCCTTGAAGA AACTATTTTCTTGGCTGCTTGAAGCCTTCAGTAAAGATACAATGCCGTAc tacttcaatgaaaagtccaATATTATTGAGGGGATGTCAGATCAAACAAA GCAACTTATCATTACAAACATTGGAGAAGTTTTGGGGGATTTACAACAAT TTATACCCTCAGATATTGACCGAGAGCTTGCTGTTGCTAAAGATATCTTC ATTTGGGCAGAAAAGATGAACAAAATTTTAACATTGATAAAGGACAAGAA TTATAAAGAAGCGTTGAAGATACTaccaaaagaattgattttgGATATTA TTGCTTTTTATTTTGCTGAAATTGGCTGGGATGTCATCCATGAGAAAATT GAGAAAGAACTTGATAGGCTCATAGAGCGGGCTGAGAAAGAAATTGACCG CAGCttaaagaaagttgaaaaagaacTTGACAGGTTCACAGAGCGAGCTG AGAAAGAAATTGACCGCGGTTCAAAGACAGTTGAAAATGAACTTGACAGG CTCACAGAGCGAGCTGAGAAAGAAATTGACCGCAGCTTAAAGAAAGTCGA AAAAGAACTTGACAGGTTCACAGAGCGAGCTGAGAAAGAAATTGACCGCA GTTcaaagaaagttgaaaatgagGTTGACCGTGTTAAAGAAAGCGTGGTG AGTGAAGTCCAGAGAAGTgggaaaaaagttgaacacgaGGTTAACCATGT TAAAGAAAGCGTGGTTAGTGAAGTCCAGAGAAGTgggaaaaaagttgaac atgaACTCAAACGATTAAAACGTAGATTCAGACGATAAAGTCTCTTTGCT TTCACAATNGGGAActattttttgcgggaactaatttttgcggttcgcag ttcaagatttaatatttaatatttacgggaacttaattttgcagatttct cacttgaaagaaaattagagccgtACTGTGAATT

Coding sequence (CDS) from alignment at scaffold_478:239339..242372+

>TCONS_00067989 ID=TCONS_00067989|Name=TCONS_00067989|organism=Clytia hemisphaerica|type=CDS|length=8490bp|location=Sequence derived from alignment at scaffold_478:239339..242372+ (Clytia hemisphaerica)
aTGCTTATAAAGGTTTTGTCTGCTATATGTTTTATGGCATTGGCTGGTGA
AGTAAGAAACAAGATGGCTGTGTCAAGTTctacaaatgataaaaaatttg
ctttgctgcaagaattttttaatttagatGAGAGATTTCGTGAAACTCTT
CATGCtggccttcaaaaatttttatggAATGGAAGTGTCACAAGGAAACA
CCCAAATGCAAAGAAAAATATCCAGCTTGCTGGCAGTGCTATAGAGGGTG
CATCTTTGGCAAGagtttttcaaaagaatgaTGAGTTTCCAAGTGGTTTG
AACCAAGAGATAGAAGTGGACATTGAGTTCATGTATCTCAAGTTACCAGA
ATCAAAGCAAGATCTTATCCAAGATATTGAGGCAGATCAAGGATACATAA
AAATGAAGCTTCAAGAAGATCTGTTTGATGACATTAAAAGCATTGGTTGG
AATCTTGACCAATATGAATTTGATGAAGTTTACAAAGAGGTGAAATCTCC
AGAAGGCTATTTTCTACcgttcaaaatcaaatcaattgcTAAGAAGAAAG
TAGCTTATCGTGATGAGAAACAAGGACTCCGTTTGATGGCTGCTGCGGTT
TATAATGTTAAGAAGAGAAATGTGGACTTCAAGCCAATTGCTAATGAGAT
CACAAAATCTTCTGTTTCCTCAGAATACGTTTTAGAAGTGAAGGGTgaaa
gaaaacttaaaatttcttttgatactgTTGTGGTTGTTGGGCTATCATGG
CATTCTCAAATAGGCAACGATTGGTTGAATAGACCTAAAAACTGGCCATC
GCATGCTGTCTGTCAACAAATTTTGGGTTCTAGTAGTGTTGTCATTGCCA
AACCATCAAGAAAAAATAAGCTTGACCCAAACACTACTGAAATGCGCTAT
GCATATTCTCAAACAGAGCGCAAACTTGTTAAATTACGCAGTCagaatca
aaattttgtgtaCATGGTTTTTAAAATCATGTTTGTGAAATGGATCAAGC
CAATTGATACAGAAGAAATCAGTTCTTTCATTGCCAAAACTGCAATGTTT
TGGATTGCTGAGGAATTTCCACCTGAAAATTCTATGTGGGATGTTGTGGA
TAGTGAGTGCTTGGTAACTCCCTTGAAGAAACTATTTTCTTGGCTGCTTG
AAGCCTTCAGTAAAGATACAATGCCGTActacttcaatgaaaagtccaAT
ATTATTGAGGGGATGTCAGATCAAACAAAGCAACTTATCATTACAAACAT
TGGAGAAGTTTTGGGGGATTTACAACAATTTATACCCTCAGATATTGACC
GAGAGCTTGCTGTTGCTAAAGATATCTTCATTTGGGCAGAAAAGATGAAC
AAAATTTTAACATTGATAAAGGACAAGAATTATAAAGAAGCGTTGAAGAT
ACTaccaaaagaattgattttgGATATTATTGCTTTTTATTTTGCTGAAA
TTGGCTGGGATGTCATCCATGAGAAAATTGAGAAAGAACTTGATAGGTTC
ACAGAGCGAGCTGAGAAAGAAATTGACCGCGGTTCAAAGACAGTTGAAAA
TGAACTTGACAGGTTCACAGAGCGAGCTGAGAAAGAAATTGACCGCAGTT
caaagaaagttgaaaatgagGTTGACCGTGTTAAAGAAAGCGTGGTGAGT
GAAGTCCAGAGAAGTgggaaaaaattgaacatgaACTCAAACGATTAAaT
GCTTATAAAGGTTTTGTCTGCTATATGTTTTATGGCATTGGCTGGTGAAG
TAAGAAACAAGATGGCTGTGTCAAGTTctacaaatgataaaaaatttgct
ttgctgcaagaattttttaatttagatGAGAGATTTCGTGAAACTCTTCA
TGCtggccttcaaaaatttttatggAATGGAAGTGTCACAAGGAAACACC
CAAATGCAAAGAAAAATATCCAGCTTGCTGGCAGTGCTATAGAGGGTGCA
TCTTTGGCAAGagtttttcaaaagaatgaTGAGTTTCCAAGTGGTTTGAA
CCAAGAGATAGAAGTGGACATTGAGTTCATGTATCTCAAGTTACCAGAAT
CAAAGCAAGATCTTATCCAAGATATTGAGGCAGATCAAGGATACATAAAA
ATGAAGCTTCAAGAAGATCTGTTTGATGACATTAAAAGCATTGGTTGGAA
TCTTGACCAATATGAATTTGATGAAGTTTACAAAGAGGTGAAATCTCCAG
AAGGCTATTTTCTACcgttcaaaatcaaatcaattgcTAAGAAGAAAGTA
GCTTATCGTGATGAGAAACAAGGACTCCGTTTGATGGCTGCTGCGGTTTA
TAATGTTAAGAAGAGAAATGTGGACTTCAAGCCAATTGCTAATGAGATCA
CAAAATCTTCTGTTTCCTCAGAATACGTTTTAGAAGTGAAGGGTgaaaga
aaacttaaaatttcttttgatactgTTGTGGTTGTTGGGCTATCATGGCA
TTCTCAAATAGGCAACGATTGGTTGAATAGACCTAAAAACTGGCCATCGC
ATGCTGTCTGTCAACAAATTTTGGGTTCTAGTAGTGTTGTCATTGCCAAA
CCATCAAGAAAAAATAAGCTTGACCCAAACACTACTGAAATGCGCTATGC
ATATTCTCAAACAGAGCGCAAACTTGTTAAATTACGCAGTCagaatcaaa
attttgtgtaCATGGTTTTTAAAATCATGTTTGTGAAATGGATCAAGCCA
ATTGATACAGAAGAAATCAGTTCTTTCATTGCCAAAACTGCAATGTTTTG
GATTGCTGAGGAATTTCCACCTGAAAATTCTATGTGGGATGTTGTGGATA
GTGAGTGCTTGGTAACTCCCTTGAAGAAACTATTTTCTTGGCTGCTTGAA
GCCTTCAGTAAAGATACAATGCCGTActacttcaatgaaaagtccaATAT
TATTGAGGGGATGTCAGATCAAACAAAGCAACTTATCATTACAAACATTG
GAGAAGTTTTGGGGGATTTACAACAATTTATACCCTCAGATATTGACCGA
GAGCTTGCTGTTGCTAAAGATATCTTCATTTGGGCAGAAAAGATGAACAA
AATTTTAACATTGATAAAGGACAAGAATTATAAAGAAGCGTTGAAGATAC
TaccaaaagaattgattttgGATATTATTGCTTTTTATTTTGCTGAAATT
GGCTGGGATGTCATCCATGAGAAAATTGAGAAAGAACTTGATAGGTTCAC
AGAGCGAGCTGAGAAAGAAATTGACCGCGGTTCAAAGACAGTTGAAAATG
AACTTGACAGGTTCACAGAGCGAGCTGAGAAAGAAATTGACCGCAGTTca
aagaaagttgaaaatgagGTTGACCGTGTTAAAGAAAGCGTGGTGAGTGA
AGTCCAGAGAAGTgggaaaaaattgaacatgaACTCAAACGATTAAaTGC
TTATAAAGGTTTTGTCTGCTATATGTTTTATGGCATTGGCTGGTGAAGTA
AGAAACAAGATGGCTGTGTCAAGTTctacaaatgataaaaaatttgcttt
gctgcaagaattttttaatttagatGAGAGATTTCGTGAAACTCTTCATG
CtggccttcaaaaatttttatggAATGGAAGTGTCACAAGGAAACACCCA
AATGCAAAGAAAAATATCCAGCTTGCTGGCAGTGCTATAGAGGGTGCATC
TTTGGCAAGagtttttcaaaagaatgaTGAGTTTCCAAGTGGTTTGAACC
AAGAGATAGAAGTGGACATTGAGTTCATGTATCTCAAGTTACCAGAATCA
AAGCAAGATCTTATCCAAGATATTGAGGCAGATCAAGGATACATAAAAAT
GAAGCTTCAAGAAGATCTGTTTGATGACATTAAAAGCATTGGTTGGAATC
TTGACCAATATGAATTTGATGAAGTTTACAAAGAGGTGAAATCTCCAGAA
GGCTATTTTCTACcgttcaaaatcaaatcaattgcTAAGAAGAAAGTAGC
TTATCGTGATGAGAAACAAGGACTCCGTTTGATGGCTGCTGCGGTTTATA
ATGTTAAGAAGAGAAATGTGGACTTCAAGCCAATTGCTAATGAGATCACA
AAATCTTCTGTTTCCTCAGAATACGTTTTAGAAGTGAAGGGTgaaagaaa
acttaaaatttcttttgatactgTTGTGGTTGTTGGGCTATCATGGCATT
CTCAAATAGGCAACGATTGGTTGAATAGACCTAAAAACTGGCCATCGCAT
GCTGTCTGTCAACAAATTTTGGGTTCTAGTAGTGTTGTCATTGCCAAACC
ATCAAGAAAAAATAAGCTTGACCCAAACACTACTGAAATGCGCTATGCAT
ATTCTCAAACAGAGCGCAAACTTGTTAAATTACGCAGTCagaatcaaaat
tttgtgtaCATGGTTTTTAAAATCATGTTTGTGAAATGGATCAAGCCAAT
TGATACAGAAGAAATCAGTTCTTTCATTGCCAAAACTGCAATGTTTTGGA
TTGCTGAGGAATTTCCACCTGAAAATTCTATGTGGGATGTTGTGGATAGT
GAGTGCTTGGTAACTCCCTTGAAGAAACTATTTTCTTGGCTGCTTGAAGC
CTTCAGTAAAGATACAATGCCGTActacttcaatgaaaagtccaATATTA
TTGAGGGGATGTCAGATCAAACAAAGCAACTTATCATTACAAACATTGGA
GAAGTTTTGGGGGATTTACAACAATTTATACCCTCAGATATTGACCGAGA
GCTTGCTGTTGCTAAAGATATCTTCATTTGGGCAGAAAAGATGAACAAAA
TTTTAACATTGATAAAGGACAAGAATTATAAAGAAGCGTTGAAGATACTa
ccaaaagaattgattttgGATATTATTGCTTTTTATTTTGCTGAAATTGG
CTGGGATGTCATCCATGAGAAAATTGAGAAAGAACTTGATAGGTTCACAG
AGCGAGCTGAGAAAGAAATTGACCGCGGTTCAAAGACAGTTGAAAATGAA
CTTGACAGGTTCACAGAGCGAGCTGAGAAAGAAATTGACCGCAGTTcaaa
gaaagttgaaaatgagGTTGACCGTGTTAAAGAAAGCGTGGTGAGTGAAG
TCCAGAGAAGTgggaaaaaattgaacatgaACTCAAACGATTAAaTGCTT
ATAAAGGTTTTGTCTGCTATATGTTTTATGGCATTGGCTGGTGAAGTAAG
AAACAAGATGGCTGTGTCAAGTTctacaaatgataaaaaatttgctttgc
tgcaagaattttttaatttagatGAGAGATTTCGTGAAACTCTTCATGCt
ggccttcaaaaatttttatggAATGGAAGTGTCACAAGGAAACACCCAAA
TGCAAAGAAAAATATCCAGCTTGCTGGCAGTGCTATAGAGGGTGCATCTT
TGGCAAGagtttttcaaaagaatgaTGAGTTTCCAAGTGGTTTGAACCAA
GAGATAGAAGTGGACATTGAGTTCATGTATCTCAAGTTACCAGAATCAAA
GCAAGATCTTATCCAAGATATTGAGGCAGATCAAGGATACATAAAAATGA
AGCTTCAAGAAGATCTGTTTGATGACATTAAAAGCATTGGTTGGAATCTT
GACCAATATGAATTTGATGAAGTTTACAAAGAGGTGAAATCTCCAGAAGG
CTATTTTCTACcgttcaaaatcaaatcaattgcTAAGAAGAAAGTAGCTT
ATCGTGATGAGAAACAAGGACTCCGTTTGATGGCTGCTGCGGTTTATAAT
GTTAAGAAGAGAAATGTGGACTTCAAGCCAATTGCTAATGAGATCACAAA
ATCTTCTGTTTCCTCAGAATACGTTTTAGAAGTGAAGGGTgaaagaaaac
ttaaaatttcttttgatactgTTGTGGTTGTTGGGCTATCATGGCATTCT
CAAATAGGCAACGATTGGTTGAATAGACCTAAAAACTGGCCATCGCATGC
TGTCTGTCAACAAATTTTGGGTTCTAGTAGTGTTGTCATTGCCAAACCAT
CAAGAAAAAATAAGCTTGACCCAAACACTACTGAAATGCGCTATGCATAT
TCTCAAACAGAGCGCAAACTTGTTAAATTACGCAGTCagaatcaaaattt
tgtgtaCATGGTTTTTAAAATCATGTTTGTGAAATGGATCAAGCCAATTG
ATACAGAAGAAATCAGTTCTTTCATTGCCAAAACTGCAATGTTTTGGATT
GCTGAGGAATTTCCACCTGAAAATTCTATGTGGGATGTTGTGGATAGTGA
GTGCTTGGTAACTCCCTTGAAGAAACTATTTTCTTGGCTGCTTGAAGCCT
TCAGTAAAGATACAATGCCGTActacttcaatgaaaagtccaATATTATT
GAGGGGATGTCAGATCAAACAAAGCAACTTATCATTACAAACATTGGAGA
AGTTTTGGGGGATTTACAACAATTTATACCCTCAGATATTGACCGAGAGC
TTGCTGTTGCTAAAGATATCTTCATTTGGGCAGAAAAGATGAACAAAATT
TTAACATTGATAAAGGACAAGAATTATAAAGAAGCGTTGAAGATACTacc
aaaagaattgattttgGATATTATTGCTTTTTATTTTGCTGAAATTGGCT
GGGATGTCATCCATGAGAAAATTGAGAAAGAACTTGATAGGTTCACAGAG
CGAGCTGAGAAAGAAATTGACCGCGGTTCAAAGACAGTTGAAAATGAACT
TGACAGGTTCACAGAGCGAGCTGAGAAAGAAATTGACCGCAGTTcaaaga
aagttgaaaatgagGTTGACCGTGTTAAAGAAAGCGTGGTGAGTGAAGTC
CAGAGAAGTgggaaaaaattgaacatgaACTCAAACGATTAAaTGCTTAT
AAAGGTTTTGTCTGCTATATGTTTTATGGCATTGGCTGGTGAAGTAAGAA
ACAAGATGGCTGTGTCAAGTTctacaaatgataaaaaatttgctttgctg
caagaattttttaatttagatGAGAGATTTCGTGAAACTCTTCATGCtgg
ccttcaaaaatttttatggAATGGAAGTGTCACAAGGAAACACCCAAATG
CAAAGAAAAATATCCAGCTTGCTGGCAGTGCTATAGAGGGTGCATCTTTG
GCAAGagtttttcaaaagaatgaTGAGTTTCCAAGTGGTTTGAACCAAGA
GATAGAAGTGGACATTGAGTTCATGTATCTCAAGTTACCAGAATCAAAGC
AAGATCTTATCCAAGATATTGAGGCAGATCAAGGATACATAAAAATGAAG
CTTCAAGAAGATCTGTTTGATGACATTAAAAGCATTGGTTGGAATCTTGA
CCAATATGAATTTGATGAAGTTTACAAAGAGGTGAAATCTCCAGAAGGCT
ATTTTCTACcgttcaaaatcaaatcaattgcTAAGAAGAAAGTAGCTTAT
CGTGATGAGAAACAAGGACTCCGTTTGATGGCTGCTGCGGTTTATAATGT
TAAGAAGAGAAATGTGGACTTCAAGCCAATTGCTAATGAGATCACAAAAT
CTTCTGTTTCCTCAGAATACGTTTTAGAAGTGAAGGGTgaaagaaaactt
aaaatttcttttgatactgTTGTGGTTGTTGGGCTATCATGGCATTCTCA
AATAGGCAACGATTGGTTGAATAGACCTAAAAACTGGCCATCGCATGCTG
TCTGTCAACAAATTTTGGGTTCTAGTAGTGTTGTCATTGCCAAACCATCA
AGAAAAAATAAGCTTGACCCAAACACTACTGAAATGCGCTATGCATATTC
TCAAACAGAGCGCAAACTTGTTAAATTACGCAGTCagaatcaaaattttg
tgtaCATGGTTTTTAAAATCATGTTTGTGAAATGGATCAAGCCAATTGAT
ACAGAAGAAATCAGTTCTTTCATTGCCAAAACTGCAATGTTTTGGATTGC
TGAGGAATTTCCACCTGAAAATTCTATGTGGGATGTTGTGGATAGTGAGT
GCTTGGTAACTCCCTTGAAGAAACTATTTTCTTGGCTGCTTGAAGCCTTC
AGTAAAGATACAATGCCGTActacttcaatgaaaagtccaATATTATTGA
GGGGATGTCAGATCAAACAAAGCAACTTATCATTACAAACATTGGAGAAG
TTTTGGGGGATTTACAACAATTTATACCCTCAGATATTGACCGAGAGCTT
GCTGTTGCTAAAGATATCTTCATTTGGGCAGAAAAGATGAACAAAATTTT
AACATTGATAAAGGACAAGAATTATAAAGAAGCGTTGAAGATACTaccaa
aagaattgattttgGATATTATTGCTTTTTATTTTGCTGAAATTGGCTGG
GATGTCATCCATGAGAAAATTGAGAAAGAACTTGATAGGTTCACAGAGCG
AGCTGAGAAAGAAATTGACCGCGGTTCAAAGACAGTTGAAAATGAACTTG
ACAGGTTCACAGAGCGAGCTGAGAAAGAAATTGACCGCAGTTcaaagaaa
gttgaaaatgagGTTGACCGTGTTAAAGAAAGCGTGGTGAGTGAAGTCCA
GAGAAGTgggaaaaaattgaacatgaACTCAAACGATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042457XLOC_042457Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067989-exon-scaffold_478-1491911889:239339..239764TCONS_00067989-exon-scaffold_478-1491911889:239339..239764Clytia hemisphaericaexon
TCONS_00067989-exon-scaffold_478-1510915933:239339..239764TCONS_00067989-exon-scaffold_478-1510915933:239339..239764Clytia hemisphaericaexon
TCONS_00067989-exon-scaffold_478-1575043694:239339..239764TCONS_00067989-exon-scaffold_478-1575043694:239339..239764Clytia hemisphaericaexon
TCONS_00067989-exon-scaffold_478-1491911889:240652..241805TCONS_00067989-exon-scaffold_478-1491911889:240652..241805Clytia hemisphaericaexon
TCONS_00067989-exon-scaffold_478-1510915933:240652..241805TCONS_00067989-exon-scaffold_478-1510915933:240652..241805Clytia hemisphaericaexon
TCONS_00067989-exon-scaffold_478-1575043694:240652..241805TCONS_00067989-exon-scaffold_478-1575043694:240652..241805Clytia hemisphaericaexon
TCONS_00067989-exon-scaffold_478-1491911889:241872..241937TCONS_00067989-exon-scaffold_478-1491911889:241872..241937Clytia hemisphaericaexon
TCONS_00067989-exon-scaffold_478-1510915933:241872..241937TCONS_00067989-exon-scaffold_478-1510915933:241872..241937Clytia hemisphaericaexon
TCONS_00067989-exon-scaffold_478-1575043694:241872..241937TCONS_00067989-exon-scaffold_478-1575043694:241872..241937Clytia hemisphaericaexon
TCONS_00067989-exon-scaffold_478-1491911889:242004..242115TCONS_00067989-exon-scaffold_478-1491911889:242004..242115Clytia hemisphaericaexon
TCONS_00067989-exon-scaffold_478-1510915933:242004..242115TCONS_00067989-exon-scaffold_478-1510915933:242004..242115Clytia hemisphaericaexon
TCONS_00067989-exon-scaffold_478-1575043694:242004..242115TCONS_00067989-exon-scaffold_478-1575043694:242004..242115Clytia hemisphaericaexon
TCONS_00067989-exon-scaffold_478-1491911889:242183..242372TCONS_00067989-exon-scaffold_478-1491911889:242183..242372Clytia hemisphaericaexon
TCONS_00067989-exon-scaffold_478-1510915933:242183..242372TCONS_00067989-exon-scaffold_478-1510915933:242183..242372Clytia hemisphaericaexon
TCONS_00067989-exon-scaffold_478-1575043694:242183..242372TCONS_00067989-exon-scaffold_478-1575043694:242183..242372Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067989-proteinTCONS_00067989-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_478supercontigscaffold_478:239339..242372 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.37542 1.04838 3.65179 1.78635 5.7991 4.56068 7.08647 9.12969 3.83247 6.25662 3.73093 1.432 4.73426 3.74961 6.26343 4.71753 5.24284 5.13888 8.09435 7.99008 3.63808 4.55291 3.08167 5.87566 7.05692 7.76933 0.737076 0 4.33372 3.6448
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR024810Mab-21_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067989 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top