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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067986 ID=TCONS_00067986|Name=TCONS_00067986|organism=Clytia hemisphaerica|type=transcript|length=3263bp TTTTAGAGTAAAAAAAGTCAAGTTAAAATAACTATAAGAGTGCGTTAACA GTTTGAGACAATATGGGGTCAGTTTGTGCGACAATTCAACTTCAGGATGA AGATATTGCACAGATTCAAAATATAACTGGTTtcTCACCAAATCAAATTA AAAGGCTCTACCACAGATTCTCCAACTTGGATAAGTCAAACAAAGGTCGA TTAAGTGAAGAAGATCTACTACGGATACCTGAGCTTGCAATCAACCCCCT TGGTGAAAGAATTGTCCACTCCTTCTTCTgtcacGAGAACGAACCCGGAG TAGAGGAACCTGAAGAAGGGATTAATTTCACTCAATTCGTCAAGgTATTG GCACGTTTCCGGAGAGCTGAAAACGGAAAACCTCAACCATTGAATTCCAA TGACCACAAATTAGAATATGCGTTTAAAATGTATGATATGGATGGAACAC ACAAAATTTCCAAAGAAAACATTTGCGAGATTTTAACATTGATGGTGGGA TCAAATAAATCGAGCGAACAACTGGCGGCCATCGCTGATCGTACCATACA AGAAGCTGATGAAGATAAAGATGGCTTTATCAATTTCGATGAATTCAAAA AGGTAATGGCGAAGACTGATTTTCAACAGAAGATGAGTATCCGATTTTTG GCTTGAAAAAGTTTCAATATTTCAGCTTGGTTAATGATTGTTAGTGAAGA ACCTCCTTCCTGCGTATTATCATCTTTTTATATTCTTACTGATAGTGCCA GATAATATTCCATCatagtcaatataaaaaaacccGGTCTGGCaggcttt tgtttctttcttttgttaacAGTTAGAGCTTGCGTTCGCAAATCGGCTTG TTTTGCATacattttgatcatgtgattagaaattAGGCCAATTAGAgaat ttggtaacgtgatcaaaaagtatgcaaatctcAACTTGCATTTTGGTtat aacaaaggaaaattttacaacaaagctaaaacaataccttgccagaccag agtttttttataaagactaTGATTCCATGGCGttcatcagtaacgtaaat aaagcctggaatacacgtgGACGAGGTTGGTTAGTGAAACATTCtgaaag tattttttaacaaaagggAAGTGTGATAGTGTGATTCATTTATTTAGACG ATTTTATGACAGTGAAAGCCCTCAGGTATTGGTTATAGTTATAAACACGT TTTTCATAAGAgcaatataagaacataaggctttaatGGCCAGaatgtta agaataagttaagaatactttaaggctttttgtaCTCGAAAACATCCGAT TTTTTAggaaatacacctttttgaccgtagtcgcgcggtcaggcgcctGC CACTTTATTACTTagtttaccaccctaaactcgatccaatccttttttta cacttttttctactgtctctaggtgcgaaaaaagactgggacggtttaag ggtggtaaaacggacaaaaaaatgaccGTGCGGCAATTGGCGTctacggt cgaaaaagtgtattGCAAATACGAACGTTAAGAACGTTCAAAGGCTTTGT TATTATGAAAAAACATGCAATGAGAGTCCTGAAACATTGgtaatacaggg tgtccggaaaaaagtatcgagccgtaccacttctatagaaagaaagttct tgtgtgtgtttcactaaatttgtaatgtttatcaaagtttctctgtGTGA TATgaattgtcatgagacatcttttattaataaattttacaaaaaacaat tctcaataactttaacttcgtcaaaattgtaaagaaagttaattcttttt aatcataatgacttttgtaaaaaaattattgtgttggtgtatattttctt acattttattaaacacacgcaacaaccttctaccCCGAATCATGTttgaa ctcgatacttttttccggacaccctgtagttaCATTTCGCATGCATGTGT GTCTGAAATTAGTATTTTGATCTGAGTATGAATTTTATAATAAAACTTTT CTGATGACCATATCTATACAATAGCAATCAAACGATAGTATCGTTGAAAA TAATGGCAAGTTTGTAGAAATCTAGAAGTCATAGTAGGATTTgttacaaa aatctttttcgccTAAGAAAGtttattattaaatttttatttaaatttaa aagaagTTATTATTTTATATATCTTTTTGTTTTAGCTGAAATTGtatcta aaatatttcaatttgaagatAGTATCCTGATTTCTTGTATTTAATTTAGA TATTAAGGCCTATTCCACGTGCTTTTAGACCATGCTCGCACGGAACGGTT Ccttttcgctccgaaacgagatgaagctattctattggttagaagtgacg taaaagttGAATtgaaccaatagaatggcttcatttcgttccGGAAAGAA ACAAAATCGTAGTTTGTGAACGTGGTTTTAGAATACAAGAATAAAAGATT TTATGAAGTGCATCGTTTTTATATGATTTAAGCACTTTCTTTGTCAAACT CCTAACCGTAAATTGCTATTTTCAGAatagttaaaataaaaaattgacca atttaaGGACTGGGGAATGAGTTTGAGGTGGTACTGGAAATGTCttttta ctttaatgggattaattttcacggggattaaatttcgcgggttttGCAGA TTTCGTGgatttcgcgaaattaagtcggacatttggaaaggccttatcca caaaatattttcaaacaaaactcaaaaaatgtcaaatataaactactttt aaaatgtttactggcgacaaagaagcgctaataatgaaTAATGCTTGAAC AAACAACATGCGTGATTTGGCAGTAAAAGTTataaaatcgtgaaaatatg agaaatttaatccccgcgaaaatttatcccattaaagtaaaaagattttt gatgaACATCAAGACAAATAAAGTGTTACGGTACAAGAAAATTGGGGcta aatgataattttttatatattacTTAACTTGAGTTTGGTTatttcattat tgtatttgtaaTTTTATCCTAATTATATAAAAGTGCACCCATTTAATTAT TTCAATTTGCATCTCTACACCTGGTATTATCTTACGGAAATATAGGTTTT GAAACACGTTactttaaatcaaatcaaattaattAAGCGTATTTGTTAAT ACACCTTtccgaccgtagccaccaattacCGTGCCtgcattttttgtccg ctttatcccactaaaactgtcccagtccttttttcgcacctatagacaat agaaaaatgtgtc Run BLAST on NCBI transcript from alignment at scaffold_478:186871..205854+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067986 ID=TCONS_00067986|Name=TCONS_00067986|organism=Clytia hemisphaerica|type=transcript|length=18984bp|location=Sequence derived from alignment at scaffold_478:186871..205854+ (Clytia hemisphaerica) TTTTAGAGTAAAAAAAGTCAAGTTAAAATAACTATAAGAGTGCGTTAACA
GTTTGAGACAATATGGGGTCAGTTTGTGCGACAATTCAACTTCAGGATGA
AGATATTGCACAGATTCAAAATATAACTGGTTGTAAGTATTACATTTTTA
TTTATACTCTATATCAGTGAAATTTTCTTAGTAGCACCAATTTCGTCTTA
ACAAActgtataaaaacataaggcttcgatggttaaaatgttaaaaacaa
attaagaacatttttaggctatgaggactctagaacaccgaatttcataa
gaaaatggactaaaatgctcaaaaaaaagtaaaaataagaacataaaatt
caaaaagttaagaacatcccaaggctttaaaaattttggatgtttttata
aaaaaaaacgtgtataccaatgtttttttgttttttccaatACTTATTGA
CTTATTCAATGCCAGGCTGAGGttagacaggaacccgtctgcgtattttt
ttaaaatctgatgaatacttgacgggtcagagctgtgagtccgattttgg
cctcaaaaaaattacagtgggaaattNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTatta
ggatatgggaaattcaaactgtcagcccataccatgctatatatttcgcc
atcagtatatagaataagaaatcatagcatggatctccaggctaggcTGA
GGTTGTTCTTGATCAATGCTTTTGTTACGAGTTCTGATCAAAGCCAGTCA
CCTAATGATTGTGTATATTAGAATCTATACTCATggaaatatttacagta
ttCTTACAACAATTTCATGCTCGTGTAAAGATTTTCacgttatttttttt
tataagaacatgaaataaaattttgaagcctttggatgttcttaactttt
taaagggacataacagtatttgcgaaatttgtaaacaaactgtatgcagc
ggatacaaaatcaaaacaaatttcacttgtcaaaacaaaaaatcaaacca
aatatggctaattttgattgttcaattggtttacaagtttgttttagaca
cctgattttaattgttctttttaatgacacgtggctcgcgcaattttgac
attttactacttgtaagcctaaaaatgttcttattttgaccattttgtga
ggatttttggctattttcctaagaaaaagtacttttttaaagttctaagc
cttaaaatgttcttaacttgttcttaacattttggccatcgaagccttat
gttcttatatagtttgttcttatataaaaaacgtgtaagattCTAACATT
CTTTTATTAATAAAATGATAAACGATTTAAAAACTAATTCAATCATCGAA
AAGAcattcatttttgttttataaaaaatacttttattaCTTTAGCATCC
GATGGATAAAATTATCTTAATCTCCCTATCTTTCCCAAgatcttgaaaat
gaaagacCAATTAGCTTACTTGCTTACTAGCTGTTCTTCACAATCGATTA
TCATGTCATTTATACAATAATTGACAaataaaatacacgcttttttttat
aagaatggtgttttttcatttcatcatggatattcttaactttttggcga
aaatcaccCAAGAATATTCTCACGGTATTCTTAGGCTAAGATCGAacttg
gcaatctacaggttaaaatgcattaaaaatgggcATTCTCAGGTTCAGTT
GCAAAATTCCATGaaggtgatattcttaccatattcttaattttttggtc
attttcatcatggacattcttataaagtgtattcttatttaaaaaaagcg
tgtaactgAATCAAGTTACTTTTGGGCACTTTAATATTCTACTACACttt
attttttctactttttttttatagtcTCACCAAATCAAATTAAAAGGCTC
TACCACAGATTCTCCAACTTGGATAAGTCAAACAAAGGTCGATTAAGGTA
TTTCTATATCTAGTAATTGTagtagttttttttaaatcagttaAAACTGA
TTACTCGCTGATTTATGTTCTATTAAATTATTATTCATGTCGAATTCAAA
TTGTGTAAGCATTTCCAGTGAGAATAGTTTTTATATCgccgttgacaaat
caaaagggCCAATCACAAAATTAGTGTCTGAGCAAGCTAAGAGTTTTTCT
GCCGAGTAAGCCTTAAATTTGAGATTGGCACTTTTTGCATAGTGAGATAT
ACATTAAACATAGGTCAATCTAAAAGATTTATGCTCagacaaacagaaaa
attcATAGTTTTCTCAGacaataattttgagattggaccttttAATTGGT
CAACGAAGATACACTGCATCTGTTCTAAACTACTACCCAcctttgaaagt
tttaaaaagttttgaaaatgaagaagaaccTTAAAAACTTGCTTACAAAA
atactaccttaaaggaagaaattttggcggaaagaaaatttgccGGATTT
cgccaaaatccgccaaattaagttcccgccaaaatttattttttcctcca
tccgccaaattaaattcccgtcaaacTTACTTTATCCagctatccgccaa
attaaattccctctgaaaaaactttttcggccatccgccaaattaaattc
ccgtcaaacTTACTTTATCCagctatccgccaaattaaattccctctgaa
aaaactttttcggccatccgccaaattaaattcccgccaaaatttcttcc
tttaaggtatcatGTTGTTATTATGTTTCCAACAAGCACGTAAAAgtcag
atatctaagcccgaagggctagataggcaactttaagctttctccagcaa
aaaaaagtgaagcaaaaatttgactttttaaatttcgtgccgatggatag
gatctagcattttaattgttttcggagcgcgagatcaaaacacgtaggcg
gcaaacgctatttcacatctctcaaaccggtgaaattgcatattttagtc
acgtgactttggtaggaaatccttccaaacctaggcttcacttttcgata
aaagccgcaaatctagcccttcgggctttacagatatctgtggtaaaAGT
GTTGTTTCTAAGTATTAAGTTTACTACCGCAGTCAAGTAGTAGTATGCGA
CCCCAGTCGGAGATGGCCCGaaagctcctctttcgatagctatctacctg
aaTGTAGGCCGATgacgccactctttctccctggattgctccatttaccc
ttgatcctttcTCTtatgctgagcatcaagcagagaggcatcaagtacca
ttttgggaatctttgttATGACCCGGCTAGGGATCGAACTCACAACCTTG
TgaaccgtagctggatgctctaccttcatgctacggtcgcaTAAACATTA
TAATAGACAGGGTGAAAGGTTAGCCGTCTAAACTACTACGCCAGGGATTA
AACCGTGACCTTGTGTGCCGTAGCTTGATGCTCTACGCTCATTTATGTGT
ACTATTTTGATCAATAATTATGTTTTTATAGTGAAGAAGATCTACTACGG
ATACCTGAGCTTGCAATCAACCCCCTTGGTGAAAGAATTGTCCACTCCTT
CTTCTggtattgaaatgtttttttttgatgtGGTTCTCTActaaaatata
aagaaattctTTATACTTTAATCTGATAAATTTTTGCGACTTTGAATTTT
GCGTTTTCGTCGTGtaaattttttgccatttttacgAAAATACAACTTGT
GAAATCGAAATCTCATGAAAATCAACCTGATTAAAGTAGCAGGAGGAAGA
TACTttccagccggcacacaacgttgtttcaaccttcatctaacgttata
tggacgttatgaacattagatgaacgttgaaacaacgttatgtgccagcc
gGGTTAGTACAATCCTAATTTAGCTACACTAAAGGTGTATGATTAAAGGT
AATGGTTGTTTACGTTGTTGAAAATACTCTAAACCCGTAAGGAAACACCC
CTTAGAACCTGTTTAAAGTATAGGGAAACCTGATAATCAAATAACTTGAG
ATTTTTTGCCTGTACATTCGTTCCATAGATAGTTTTGAGCGAAACATCTA
AATCTCTTTATCCAAAGTCGAAATGTGACAATTTGAACTCACtctttgaa
aatgggttcttCCGTTGTTCCGTTATTCATTCGATTGTTTTCTTGCTAAA
AGTCATAACATTGTAATTTGAATAATGTCttgactttggaaaataattaG
ACAAAGTGATTTGGAAAATTCGCCCCAGAACCATTTAGATaatttcgaag
caaaatttGATCATTCCTTCAACAGTTCTCTGAAGGGAAAAATTTTGCGG
AATCATATATTTGCTTTTATATCAACGAATAATGAgaatactttaagggc
agaaactttcgcgggcagaaactttcgcgtttttggtattttttcgcgaa
agtttctgccaggtaagaaattaaacaagaaatttgcgaaagttaatttc
ccgaaaaatgaaattttcctaaaaatcgcgaaagttttttccaagtttta
aaagccgAGGAGAGTCGATATTATCGATATTATCGCAGTAACTAGGATTC
GGAATGAGAGGAAGAAGTGCAAATAGTTTATCTTTCCTTTATTACCATAT
CACTCTTTCGattgaagaaaataatgagatttaaataattttttattcac
tttccctagccactcgcgaaagttattgctactaaaattgaacattcaca
aaaaaccgcgaaagtttcttccgtaaattttcttcaaaaagtaaaaatcg
cgaaacttaaatccgcgaaatttagcgacttttcggtctcgcgaaagttt
ctgcccgcgaaagtttctgcccttaaagtatttAGAATCGAAACAGTCTC
CTGTCTCTACCGCTCTTTGCTGACTTTCATCAGGCAAAAACATTTACTTA
GACAAAAGGGCCTTTATTCGAttcgaatttttattttgaaagtaaaatac
AGTAAAATAAATAGCATCACAAATTGCTCAagataattcgaaaaaattcg
aGCGAAATACTAAGAAATAAAGTAAAATATAATTTCTTCTTCACCGCAAT
TTAAGTCCTGTTTTGTGAAAAAAAGCAATTccaattttttggacctacct
ccgggtaccccggtggaggttctataaattaacccatgtccgtccgtccg
tccgtccgtctgttaccagcttttctcaggattggctcattatttttttc
tgattttttacacaatgatgcaaaatggcgatgcccaaaatgtgacggag
ccagatttttaaggaaaattcttttgggcaaatttgggccaaaaactacc
taaaaatagggttttttggactttgtgcaaaatcctgtcattactttttt
ctgattttttgtacaaagatggagggcaagattctctaaagaatggctga
agtggtttttctcggaaaattcttattcgccttaaaaaacggattttcgt
attttggggaaattccctttaaccaaatatgaaaatatagcttttctcaa
agttgactcataacttttttctgattttttgtacaaagatggagggcaag
attctctaaagaatggctgaagtggtttttctcggaaaattcttattcgc
cttaaaaaacggattttcgtattttggggaaattccctttaaccaaatat
gaaaatatagcttttctcaaagttgactcataatttttttctgatttttt
gcacaatgatgcaaaatgacaatgcccagaatgtgacagagccagatttt
taaggaaaattcttttgggcaaatttgggccaaaaacagcttaaaaggtt
ttttgggcctgaatggtttaagtgattttcgtatttggggaNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNttttccattctgaatttttgtacaattattgtcacttttttcttat
tttcatctgatgttaatcattaggtaggtccattcagcatgttgcttgtt
tttttttcagtcacGAGAACGAACCCGGAGTAGAGGAACCTGAAGAAGGG
ATTAATTTCACTCAATTCGTCAAGGTAAAGTTTTCACTCAAATAGCTTTT
AGATCAGTTTGAATAAGTAAGGCAACTCAATTCGTCAAGGTAAAGTTTTC
AGTTAAAAAGCTTTTAGATCAGTTTGAATGAGAGAGGCAAGTCAACTCGT
CAAAGTAAAGTTTTCAGTTAAAATGCTTTTAGAtcagttctcaacttcag
ttgagctacaatttgacaatgtctgtctgtctgtgtgtgtgtctgtctgt
ctgtctgtctgtctgtctatcTGTCTGTatgtcacaaaaactttggggca
gcctggagacttcaaaaatggttggatttggctaaaatttgacacacttg
ttccttgggtgaatatctgggggtgtttttttcattttttgaaaatttga
tttttttgggcctggggacgagtttttcgccaaaacgaggccaaAGCTTt
gggggcagcctggagacttcaaaaattgtttgatttggctgaaattttgc
acacttgttccttgggtgaatatctgagggtgttttttttatttttcaaa
aataatgatttttggggcctggggatgagtttttctccaaaacgaggcca
aaactttggggcagcctggagacttcaaaaattgtttgatttggctaaaa
ttttgcacacttgttccttgagtGATTATCTTGGAGGacgtatttctttt
atttttcaaaaattttgatttttgggggcctggggacgagttttcgccaa
gacgaggctaaaactttggggcagcctggagacttcaaaaattgtcggat
tttgctgaaatttggcacactttttCCTTGAGTGAATATCTGAggctttt
catttttcaaaaatcttgatttttgggtcctggggacgagttttccgcca
aaacgaggctaaaactttagagTAGAGCCTACATGCctcaaaaatggttg
gatttggctgaaatttggcacactttttccttgggtgaatatctgggggt
ctacaattgggcctatgaataatttgaagccactgaagttgagcccagtg
cgttgcgcacgttcgactatttcaatttgaataagAGAGACAAGTCAATT
CGTTAAGGTAAAGTTTTCAGTTAAAAAAAGCTTTTAGATCAGTTTGAATA
AGAGAGACAAGTCAATTCGTTAAGGTAAAGTTTTCagttaaaaaaaggtt
ttagatAAGTTTGAATAAGAGAGATAAGTCAATTCGTTAAGGTAAAGTTT
TCAGTTAAAAAGCTTTTAGATCAGTTTGAATGAGAGAGGCAAGCCAATTC
GTCAAAGTAAAGTTTTCAGTTAAAAAGCTTTTAGATCAGTTTGAATAAGA
GAGACAAGTCAATTCGTTAAGGTAAAGTTTTCAGTTAAAAAGCTTTTAGA
TAAAAAGCTTTTAGATAAGTTTGAATAAGTGAGGTAAATCAATTCGTCAT
GGTAAAGTTTTTTAGTCGAGCATCGCTATTAGCTTCGGGATCAATACGTC
ATGGTAAAGTTTTCAGTCAAATGACACTCATATCAATTTGGATAAGAAAG
GCAAACCAAATTTGTTAATGTAATGTTTTTGGTCAAGCGTCACTTATCAA
CAAGTTATGCAGACCTTAAGTAAATTACTTTATCACTTAAATCAGTTTAA
ATAAAAGAGGTAGATCAATATATCAGGCAAATTTTTCAGTTGAGCATCGC
CATTAGCTCCGGATAAGATGGGTGAATCAAGTTCACTTAATTCGTCAAGG
TAAAGTTTTCAGTCAAATGGCACTTATATCGATTTGGATAAGAAAGACTA
ATCAAAATCGTCAAGACAAAGTCTCAAGTCAAATATCATTTGAATCAGTT
TATATAAgagagttattttttctttaggTATTGGCACGTTTCCGGAGAGC
TGAAAACGGAAAACCTCAACCATTGAATTCCAATGACCACAAATTAGAAT
GTAagtacaaaaaaacaaaaccctAAGATCAAATTCACGTAAAatgaatt
gatatttttaaaataaaatcttaaaatctatCAGTCTTTTTACGTGTAAG
TGTGGTGTCGCTCTAAATTTAAAGCCTGGTAGAcgatagcctatactaga
cgtcacagCTTTTTCTCTACACAGTAACttctattccactttgcaatttt
ttcgaatgttttgagcccaggttttcgggctccaaaaattcgattttttg
acgacactttaaactttcaaagctcttgcagtagcgaaaatatcgaactt
gcgtcaaagcacttgaaaggcttctatttttcaaaaatagtcaaagtgga
actcactaagaaacggaatgaaaaatcccggtttttggtgaggtgctcgc
taggtAGACGAGCTTTGACGTCAAAATCTCATGGCCTCGAAAAATAGATG
CCCCTGCATTGTGACCGCAGTTTTTGACAAAGACCAAGCTCACANTGGCC
TCGAAAAATAGATGCCCCTGCATTGTGACCGCAGTTTTTGACAAAGGCCA
AGCTCACACCATAGTCAATAGAATAAAGAAGAAATTCAATTGACATTACT
CAAATGCTACGGTTCTGTTGTGCTCCTAAACGAGATGAAGCCATTCAATT
GGTTAGAATTGACGAAAGAATTGAATTTATCCAATAGAAtcgcttcattt
cgtttcggagcgaaacgatACTGTAGCGTGTGAACATAGTTAAGATGTCC
CTCGACAAAGTGAAAGGCGTGAATGCGTCaaagtattttattttaattca
gatgtattgatgttttttttatcttcagtATGCTTTTTGTAGAGCTTCCT
AAAAATTCCCTTGTCTAAATGAAGATATTCAATGTctgcatgaacatata
aacgactggacatctatcttttattgtctctttgaagcgagcttcgttgc
cgcctgtatttcaaaattgctataaaaaatcCGATAATATTCCGtcgtaa
ttttatttctttgaattgtttaggtaaaatgattgNcataaaaaatccga
caatattccgtcgtaattttatttctttgaattgtttaggtaaaatgatt
gatagagcttgaacatatTACTCCTAAtacacaaaaaaaatattttcaaa
tttgttcatgagtttgcaatatattttatcaatatttttaactctgaaat
gcagaatttcaactgcgtgtatacttttgaatcccttttgtcactccaat
aattttttttatgacttgaaaaaaatagcttgccaaNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagaatgtgaca
ctctctaaaattattagacacttttaagtcaaaatttggaaatattagtc
ggagttttgacaagctgacgatgattttgcttctgttatctttgttatga
tatagataaaagacttgagaaaagtagaacaacagatacttttgtcgaaa
ttttgacgttgttagcaaggtattcccaagaggtataccatcagaattta
ttgtttcatttgatgattttaacgaggcggcagcGAAGCTAGCAgcgtta
tcttcaaaaatacaaaggagatggatgtccagtcgtttatatgttcatga
tgtCTGTTTATTTTCCAGATGCGTTTAAAATGTATGATATGGATGGAACA
CACAAAATTTCCAAAGAAAACATTTGCGAGGTATACAAAAAGGTTTCTTG
AATCTCATGATTGATAAATCAAAAGGGCTAAGTCAAAATTTGGGTGTCTC
AGAAGACTGAAGGGTTCCTCCGGCTAATGTTTATATTGCTGTTACTCTTT
CGTGTCCATTGTACCCTCCTTATTATGTCGCTAAAGCTGGgtgtccactg
aaaaaaaaataagttcgTCGCAAATACCtatcgcaaaaaataaatccaga
catatgtctggaattaaaaatctattgttcttttttacgaCGAAGTTAAA
AAGTAATAAACGATGTAGAATGAaccgttttcatttttcatcgctTTTTT
TTCGGTCTATcgcaaataaaacaataggttTTGAATTCCAGACATctgtc
tggatttattttttgctaCAAACAAATTCGCGATGAGCTTATTTTTTCCA
GTGGATGCCCAGCTTGAATGTTTGCAAGACACTAAATTTGAATTTGGCCC
TTTTCACTTGCTCTTATATCATCTTATTTGAATCATACACATACTTTTAA
AATGGTAGAAGTCAAGAAGAGAAGAAAACTGGTTTGGTTTTCGGAAGTTT
GGTCCGCACATGTCCGTTATATTGTGTATGGTTTCAGAAGCCATTTCGCT
AGATAATATGGCCTAGAAATCATCTACGATCTGTACCGAACAAGTCGGAT
ACATTAGTTCTCTAGTGCAGGTTTTTCGTTTGGTGGGAATCTCTTGAGCG
CCTGTATCTATGTTGTTAGTTAGTATCTTACTAGCCGTCGGCCGGCGTCA
CACCCGCGGAGTAAAGTGTTGCTTCCGCACGATCAATCCCTTTGGGTGGA
TGGGAGGGTAAAAAGATTTGATTTTaagtcaaaaagaatgaaaCTTTATC
TCTTAAAATCGATCAAAACTCGAAAAacggcaaaaaaatttaatataatG
TTCCGTAAAGTTTGCTACCcagttagtttttttaaatcttctcTGCAGAT
TTTAACATTGATGGTGGGATCAAATAAATCGAGCGAACAACTGGCGGCCA
TCGCTGATCGTACCATACAAGAAGCTGATGAAGATAAAGATGGCTTTATC
AATTTCGATGAATTCAAAAAGGTTTGTCGGGTTAATCATCGCGAGAGTAA
ATTTCCCGTTTCCTGAATTTTTAACATAATGCGCTAAATGAAAACTCGCG
AAATCTTTGAATTCAGATTTTCAGTGTGACGTATAAGCCATATATAACTT
TTGGTTTGTGAAGTTTAATccatgcaaaatttttaaaatactgATTCGTT
AAAATTACATGGGAATGaggataccttatcggccaaaacttaaaattagg
gccgactaaaaattagggccgactaaaaatttagaaatggccaaaactta
tAAATTGTGattaaaattagggccgactaataattaaggccgactaaaat
tagggccgactattAATTAAGGCCGattaaaattaaggccgactaagttt
tggccgccGATAAGGTATAAGATTTTAAGGGTTTAAACGAATCCCCGGTC
ATAAGaattttgaccccccccccNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNccccccccccctcccctcAGACAAAAACTTTCAACTATAAAGTCA
GATcggtgtcaaaatcaaaacgtcgggtcgtaatatcaaaccGTCAGATC
GTTGGGCCGAACCGTCAGGCCGTAATGTTAAACTGTCAGATCGTCGGGTC
aaaccgtcgggtcgtaatctaaaaggtcaggtcgtcgggtcgaaccgttG
GGTCGTAATCTCAAACTGTCagatcgtcgggtcgaaccgcCGGGTCGTAA
TCTCAAAAGGTCAggtcgtcgggtcgaaccgtcggatcgtaatgtcaaaa
ggtcaggtcgtaatatcaaagggtcaggtcgtaatatcaaaaggTCGGGT
CGTGATGTCGAACAGCCGGGTCGTAGCGTCGAACCAGACTGCCGGGTTAA
ACTGCCGGGATACAATGCCGGATTATCGGGTTTATCGGGCTTATCAGATT
AGTTAAAATCTCGTTCCGCAGAATACTGTAAACTAAACACTATAATAATA
AGAACAAAAGTGGAAGCAAAATGAAAGCGAAATAATTTGATCAGTGAAAT
GTTTATAGGTCTTTATATTTTTACCACTGATTAAATATACTTTCAGGTGT
CTATAACATGTTTATATTATCAAAATCATGAAGTGTTCTTATTCaactat
ctttgtgcaaagtttcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgagatttctattttctctcg
aaagtgtgcatatggatctgagaagtgaatgaaactcatcaagacaagaa
agcctttttcaaagaagattttcatggttcgtcgtacttcaaaatatggg
acatttttgttcatccaatgacttgaaaaatcaactctggAGACTTGTAG
TCTACATAATAACTTCAGAATACTTCGATAGAATCATGGAACAACGCgga
tattattttctcgataaaagcactgtatcatgagattttgcacgaaccaa
ataaaatgaagtgaaaagtaaCTCTACGATGAACGAAAAACTCTGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNgggggggggggtactaggtttgcgaggtgacgggtatgtc
cgagccgaaaatcgaaaatcgaccctttgaaagacaaaattttggttatt
ttgggaccctttgagagactttttcctaaattttggtccattttttccaa
attttggcaaattttgctcaaaatttttggaaatcgtgaccctttgagag
agaaatttttgattttcgtgattttgggaccctattatgagactaacttt
tgaatttgtaaagggttgagagacttttgaggaaccaatgagaaaaggta
cccttatggctcgcacatacccggcacccattttgcctaagtaccccccc
ccccccggggggggaaaaatttttttttttaaattaaattttttttcccc
cccggggggggaaaaatttttttttttaaattaaattttttttccccccc
ggggggggaaaaatttttttttttaaattaaattttttttcccccccggg
ggggggacacattgatttgattaaatttaaaatcctgtgactatcattga
aaattaagatcaaaCCATCGATCAAGGGACTTTGTCTTCTTGTGCTTCTG
GCATGGTTCGCTACATATCTCTACACCCTTTTTGAAAGACCTCGTACATG
CTATGATTTGGGAACagttgaacatatttttcatgtaccaGTTTGTTTCG
TGATGGATAGACATAGttgcattttttacagtggtatggatatgctgctg
ttagaagaactgtttacattttatttacgttgttaacttgagtgaatgtg
gaatattgtgactgatgttgtatgaagtgacgataaatacatatactcaa
tgttaaaattttaagatattaaaaacattttctgctaaaaaaaggaagta
ttttttcaccgacagtttcgataaaattttatttactaggcaactttttt
ccctatgattatgaagtgctactgtgagaaaaattctgagggtgctttaa
ctgagaattttttttttgaattgaaagaaatattttggaaggcaacttca
aagaggaggtcatattattattcaaatacttttgcatCACTCTTGTTAAA
AGTGAAGCCATAAAGTATTTGTAAATACTNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNagaatttgtaaatactttatatag
ttttcaaaatccaaatgtatatacaggaattttgtaatgtgatgttattt
ttttcaaaaaatgtttcatgctttatttactatttgttactttgttcatc
tgctcttgatgaaacacaaagaacacaggaaaacaaaaaagaactgtGCA
TATCTTCTCATCCCACAATCTCTTTGTGTATAGAAAAACTCTTGTGTAGT
ATTTACATTtgtgaatcaattttggcatagcaaaacagaaaatttccttc
atataagtatgatacaagacagaagaaattacacgaaagatttttcattc
ccctcccaacttcgaacttttttatgcaaagtatttttcggtttgtttag
attacgaaaacgaaagtgaaaatcccgttcgaccaatcaaattgtaaact
ttcatcgcgctcgaccaatcaaattccagacacgtgaccataatattttg
atttgcgtagtattggattatccctttaaaaaatgatattttacagaacg
atGTTAAATATCCCGATAAACCGGCATTGGATCCCGGCGGTCTGGCTCGA
CGCTTCCATATGACCGTTCGATAATACGACCCGACCTTTTGACATCACGA
CCtgaccctttgatattacgacccgaccctttgatattacgacctgacct
tttgacattacgacccgaccctttgatattacgacccgaccctttgatat
tacgacctgaccttttgacattacgacccgaccctttgatattacgaccc
gaccttttgacattacgacccgaccctttgatattacgacccgacccttt
gatattaagacccgaccctttgatattacgacccgacgacctgacctttt
gacattacgacccgacggttcgacTCGACGATCTGACAGTTTGACATTAT
GGCCcgacgttttgattttgacaccgATCTGACTTTATATTCGACCTTCA
GGAAACAAGCTCGAAACCGCACGGGAAACACATTTGTTccagttaaggaa
atttcgtgTTAAAGATGCTCCACTTTATATACGagtaaaacattttaaaa
gttttctttcaataattCAGTAATTCAGTAGCTTAAAGGTTTCGTTATAT
ACAAGAGAAATGAGTAATGAGTAaaacataaaacataaaatatttcgGCC
TCTTATACAGCTGTCTTTTTTCAAGTTTCCTCTGTATAACGGTTCAACAC
TTCTATCTTTCCCTTTCTTTCAGGTAATGGCGAAGACTGATTTTCAACAG
AAGATGAGTATCCGATTTTTGGCTTGAAAAAGTTTCAATATTTCAGCTTG
GTTAATGATTGTTAGTGAAGAACCTCCTTCCTGCGTATTATCATCTTTTT
ATATTCTTACTGATAGTGCCAGATAATATTCCATCatagtcaatataaaa
aaacccGGTCTGGCaggcttttgtttctttcttttgttaacAGTTAGAGC
TTGCGTTCGCAAATCGGCTTGTTTTGCATacattttgatcatgtgattag
aaattAGGCCAATTAGAgaatttggtaacgtgatcaaaaagtatgcaaat
ctcAACTTGCATTTTGGTtataacaaaggaaaattttacaacaaagctaa
aacaataccttgccagaccagagtttttttataaagactaTGATTCCATG
GCGttcatcagtaacgtaaataaagcctggaatacacgtgGACGAGGTTG
GTTAGTGAAACATTCtgaaagtattttttaacaaaagggAAGTGTGATAG
TGTGATTCATTTATTTAGACGATTTTATGACAGTGAAAGCCCTCAGGTAT
TGGTTATAGTTATAAACACGTTTTTCATAAGAgcaatataagaacataag
gctttaatGGCCAGaatgttaagaataagttaagaatactttaaggcttt
ttgtaCTCGAAAACATCCGATTTTTTAggaaatacacctttttgaccgta
gtcgcgcggtcaggcgcctGCCACTTTATTACTTagtttaccaccctaaa
ctcgatccaatcctttttttacacttttttctactgtctctaggtgcgaa
aaaagactgggacggtttaagggtggtaaaacggacaaaaaaatgaccGT
GCGGCAATTGGCGTctacggtcgaaaaagtgtattGCAAATACGAACGTT
AAGAACGTTCAAAGGCTTTGTTATTATGAAAAAACATGCAATGAGAGTCC
TGAAACATTGgtaatacagggtgtccggaaaaaagtatcgagccgtacca
cttctatagaaagaaagttcttgtgtgtgtttcactaaatttgtaatgtt
tatcaaagtttctctgtGTGATATgaattgtcatgagacatcttttatta
ataaattttacaaaaaacaattctcaataactttaacttcgtcaaaattg
taaagaaagttaattctttttaatcataatgacttttgtaaaaaaattat
tgtgttggtgtatattttcttacattttattaaacacacgcaacaacctt
ctaccCCGAATCATGTttgaactcgatacttttttccggacaccctgtag
ttaCATTTCGCATGCATGTGTGTCTGAAATTAGTATTTTGATCTGAGTAT
GAATTTTATAATAAAACTTTTCTGATGACCATATCTATACAATAGCAATC
AAACGATAGTATCGTTGAAAATAATGGCAAGTTTGTAGAAATCTAGAAGT
CATAGTAGGATTTgttacaaaaatctttttcgccTAAGAAAGtttattat
taaatttttatttaaatttaaaagaagTTATTATTTTATATATCTTTTTG
TTTTAGCTGAAATTGtatctaaaatatttcaatttgaagatAGTATCCTG
ATTTCTTGTATTTAATTTAGATATTAAGGCCTATTCCACGTGCTTTTAGA
CCATGCTCGCACGGAACGGTTCcttttcgctccgaaacgagatgaagcta
ttctattggttagaagtgacgtaaaagttGAATtgaaccaatagaatggc
ttcatttcgttccGGAAAGAAACAAAATCGTAGTTTGTGAACGTGGTTTT
AGAATACAAGAATAAAAGATTTTATGAAGTGCATCGTTTTTATATGATTT
AAGCACTTTCTTTGTCAAACTCCTAACCGTAAATTGCTATTTTCAGAata
gttaaaataaaaaattgaccaatttaaGGACTGGGGAATGAGTTTGAGGT
GGTACTGGAAATGTCtttttactttaatgggattaattttcacggggatt
aaatttcgcgggttttGCAGATTTCGTGgatttcgcgaaattaagtcgga
catttggaaaggccttatccacaaaatattttcaaacaaaactcaaaaaa
tgtcaaatataaactacttttaaaatgtttactggcgacaaagaagcgct
aataatgaaTAATGCTTGAACAAACAACATGCGTGATTTGGCAGTAAAAG
TTataaaatcgtgaaaatatgagaaatttaatccccgcgaaaatttatcc
cattaaagtaaaaagatttttgatgaACATCAAGACAAATAAAGTGTTAC
GGTACAAGAAAATTGGGGctaaatgataattttttatatattacTTAACT
TGAGTTTGGTTatttcattattgtatttgtaaTTTTATCCTAATTATATA
AAAGTGCACCCATTTAATTATTTCAATTTGCATCTCTACACCTGGTATTA
TCTTACGGAAATATAGGTTTTGAAACACGTTactttaaatcaaatcaaat
taattAAGCGTATTTGTTAATACACCTTtccgaccgtagccaccaattac
CGTGCCtgcattttttgtccgctttatcccactaaaactgtcccagtcct
tttttcgcacctatagacaatagaaaaatgtgtc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00067986-exon-scaffold_478-1491911889:186871..187002 | TCONS_00067986-exon-scaffold_478-1491911889:186871..187002 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1510915933:186871..187002 | TCONS_00067986-exon-scaffold_478-1510915933:186871..187002 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1575043694:186871..187002 | TCONS_00067986-exon-scaffold_478-1575043694:186871..187002 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1491911889:189395..189467 | TCONS_00067986-exon-scaffold_478-1491911889:189395..189467 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1510915933:189395..189467 | TCONS_00067986-exon-scaffold_478-1510915933:189395..189467 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1575043694:189395..189467 | TCONS_00067986-exon-scaffold_478-1575043694:189395..189467 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1491911889:191002..191076 | TCONS_00067986-exon-scaffold_478-1491911889:191002..191076 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1510915933:191002..191076 | TCONS_00067986-exon-scaffold_478-1510915933:191002..191076 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1575043694:191002..191076 | TCONS_00067986-exon-scaffold_478-1575043694:191002..191076 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1491911889:193631..193694 | TCONS_00067986-exon-scaffold_478-1491911889:193631..193694 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1510915933:193631..193694 | TCONS_00067986-exon-scaffold_478-1510915933:193631..193694 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1575043694:193631..193694 | TCONS_00067986-exon-scaffold_478-1575043694:193631..193694 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1491911889:195548..195620 | TCONS_00067986-exon-scaffold_478-1491911889:195548..195620 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1510915933:195548..195620 | TCONS_00067986-exon-scaffold_478-1510915933:195548..195620 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1575043694:195548..195620 | TCONS_00067986-exon-scaffold_478-1575043694:195548..195620 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1491911889:197389..197450 | TCONS_00067986-exon-scaffold_478-1491911889:197389..197450 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1510915933:197389..197450 | TCONS_00067986-exon-scaffold_478-1510915933:197389..197450 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1575043694:197389..197450 | TCONS_00067986-exon-scaffold_478-1575043694:197389..197450 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1491911889:198419..198541 | TCONS_00067986-exon-scaffold_478-1491911889:198419..198541 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1510915933:198419..198541 | TCONS_00067986-exon-scaffold_478-1510915933:198419..198541 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1575043694:198419..198541 | TCONS_00067986-exon-scaffold_478-1575043694:198419..198541 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1491911889:203194..205854 | TCONS_00067986-exon-scaffold_478-1491911889:203194..205854 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1510915933:203194..205854 | TCONS_00067986-exon-scaffold_478-1510915933:203194..205854 | Clytia hemisphaerica | exon |
TCONS_00067986-exon-scaffold_478-1575043694:203194..205854 | TCONS_00067986-exon-scaffold_478-1575043694:203194..205854 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_478 | supercontig | scaffold_478:186871..205854 + |
Blast
BLAST of TCONS_00067986 vs. Swiss-Prot (Human)
Match: CHP1 (Calcineurin B homologous protein 1 OS=Homo sapiens GN=CHP1 PE=1 SV=3) HSP 1 Score: 196.438 bits (498), Expect = 1.379e-56 Identity = 102/203 (50.25%), Postives = 139/203 (68.47%), Query Frame = 3
Query: 63 MGSVCATIQLQDEDIAQIQNITGFSPNQIKRLYHRFSNLDKSNKGRLSEEDLLRIPELAINPLGERIVHSFFCHXXXXXXXXXXXXINFTQFVKVLARFRRAENGK-------PQPLNSNDHKLEYAFKMYDMDGTHKISKENICEILTLMVGSNKSSEQLAAIADRTIQEADEDKDGFINFDEFKKVMAKTDFQQKMSIRFL 650
MGS +T+ L+DE++ +I+ TGFS +QI RLY RF++LDK G LS ED RIPELAINPLG+RI+++FF + +NF F++ LA FR E+ + P+PLNS +KL +AF++YD+D KIS++ + ++L +MVG N S EQL +IADRTIQEAD+D D I+F EF KV+ K D +QKMSIRFL
Sbjct: 1 MGSRASTL-LRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFPEGEDQ--------VNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVDVEQKMSIRFL 194
The following BLAST results are available for this feature:
|