TCONS_00067984 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067984
Unique NameTCONS_00067984
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2534

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067984 ID=TCONS_00067984|Name=TCONS_00067984|organism=Clytia hemisphaerica|type=transcript|length=2534bp
TTTTAGAGTAAAAAAAGTCAAGTTAAAATAACTATAAGAGTGCGTTAACA
GTTTGAGACAATATGGGGTCAGTTTGTGCGACAATTCAACTTCAGGATGA
AGATATTGCACAGATTCAAAATATAACTGGTTtcTCACCAAATCAAATTA
AAAGGCTCTACCACAGATTCTCCAACTTGGATAAGTCAAACAAAGGTCGA
TTAAGTGAAGAAGATCTACTACGGATACCTGAGCTTGCAATCAACCCCCT
TGGTGAAAGAATTGTCCACTCCTTCTTCTgtcacGAGAACGAACCCGGAG
TAGAGGAACCTGAAGAAGGGATTAATTTCACTCAATTCGTCAAGgTATTG
GCACGTTTCCGGAGAGCTGAAAACGGAAAACCTCAACCATTGAATTCCAA
TGACCACAAATTAGAATATGCGTTTAAAATGTATGATATGGATGGAACAC
ACAAAATTTCCAAAGAAAACATTTGCGAGATTTTAACATTGATGGTGGGA
TCAAATAAATCGAGCGAACAACTGGCGGCCATCGCTGATCGTACCATACA
AGAAGCTGATGAAGATAAAGATGGCTTTATCAATTTCGATGAATTCAAAA
AGGTAATGGCGAAGACTGATTTTCAACAGAAGATGAGTATCCGATTTTTG
GCTTGAAAAAGTTTCAATATTTCAGCTTGGTTAATGATTGTTAgtgcgaa
aaaagactgggacggtttaagggtggtaaaacggacaaaaaaatgaccGT
GCGGCAATTGGCGTctacggtcgaaaaagtgtattGCAAATACGAACGTT
AAGAACGTTCAAAGGCTTTGTTATTATGAAAAAACATGCAATGAGAGTCC
TGAAACATTGgtaatacagggtgtccggaaaaaagtatcgagccgtacca
cttctatagaaagaaagttcttgtgtgtgtttcactaaatttgtaatgtt
tatcaaagtttctctgtGTGATATgaattgtcatgagacatcttttatta
ataaattttacaaaaaacaattctcaataactttaacttcgtcaaaattg
taaagaaagttaattctttttaatcataatgacttttgtaaaaaaattat
tgtgttggtgtatattttcttacattttattaaacacacgcaacaacctt
ctaccCCGAATCATGTttgaactcgatacttttttccggacaccctgtag
ttaCATTTCGCATGCATGTGTGTCTGAAATTAGTATTTTGATCTGAGTAT
GAATTTTATAATAAAACTTTTCTGATGACCATATCTATACAATAGCAATC
AAACGATAGTATCGTTGAAAATAATGGCAAGTTTGTAGAAATCTAGAAGT
CATAGTAGGATTTgttacaaaaatctttttcgccTAAGAAAGtttattat
taaatttttatttaaatttaaaagaagTTATTATTTTATATATCTTTTTG
TTTTAGCTGAAATTGtatctaaaatatttcaatttgaagatAGTATCCTG
ATTTCTTGTATTTAATTTAGATATTAAGGCCTATTCCACGTGCTTTTAGA
CCATGCTCGCACGGAACGGTTCcttttcgctccgaaacgagatgaagcta
ttctattggttagaagtgacgtaaaagttGAATtgaaccaatagaatggc
ttcatttcgttccGGAAAGAAACAAAATCGTAGTTTGTGAACGTGGTTTT
AGAATACAAGAATAAAAGATTTTATGAAGTGCATCGTTTTTATATGATTT
AAGCACTTTCTTTGTCAAACTCCTAACCGTAAATTGCTATTTTCAGAata
gttaaaataaaaaattgaccaatttaaGGACTGGGGAATGAGTTTGAGGT
GGTACTGGAAATGTCtttttactttaatgggattaattttcacggggatt
aaatttcgcgggttttGCAGATTTCGTGgatttcgcgaaattaagtcgga
catttggaaaggccttatccacaaaatattttcaaacaaaactcaaaaaa
tgtcaaatataaactacttttaaaatgtttactggcgacaaagaagcgct
aataatgaaTAATGCTTGAACAAACAACATGCGTGATTTGGCAGTAAAAG
TTataaaatcgtgaaaatatgagaaatttaatccccgcgaaaatttatcc
cattaaagtaaaaagatttttgatgaACATCAAGACAAATAAAGTGTTAC
GGTACAAGAAAATTGGGGctaaatgataattttttatatattacTTAACT
TGAGTTTGGTTatttcattattgtatttgtaaTTTTATCCTAATTATATA
AAAGTGCACCCATTTAATTATTTCAATTTGCATCTCTACACCTGGTATTA
TCTTACGGAAATATAGGTTTTGAAACACGTTactttaaatcaaatcaaat
taattAAGCGTATTTGTTAATACACCTTtccgaccgtagccaccaattac
CGTGCCtgcattttttgtccgctttatcccactaaaactgtcccagtcct
tttttcgcacctatagacaatagaaaaatgtgtc
Run BLAST on NCBI

transcript from alignment at scaffold_478:186871..205854+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067984 ID=TCONS_00067984|Name=TCONS_00067984|organism=Clytia hemisphaerica|type=transcript|length=18984bp|location=Sequence derived from alignment at scaffold_478:186871..205854+ (Clytia hemisphaerica)
TTTTAGAGTAAAAAAAGTCAAGTTAAAATAACTATAAGAGTGCGTTAACA GTTTGAGACAATATGGGGTCAGTTTGTGCGACAATTCAACTTCAGGATGA AGATATTGCACAGATTCAAAATATAACTGGTTGTAAGTATTACATTTTTA TTTATACTCTATATCAGTGAAATTTTCTTAGTAGCACCAATTTCGTCTTA ACAAActgtataaaaacataaggcttcgatggttaaaatgttaaaaacaa attaagaacatttttaggctatgaggactctagaacaccgaatttcataa gaaaatggactaaaatgctcaaaaaaaagtaaaaataagaacataaaatt caaaaagttaagaacatcccaaggctttaaaaattttggatgtttttata aaaaaaaacgtgtataccaatgtttttttgttttttccaatACTTATTGA CTTATTCAATGCCAGGCTGAGGttagacaggaacccgtctgcgtattttt ttaaaatctgatgaatacttgacgggtcagagctgtgagtccgattttgg cctcaaaaaaattacagtgggaaattNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTatta ggatatgggaaattcaaactgtcagcccataccatgctatatatttcgcc atcagtatatagaataagaaatcatagcatggatctccaggctaggcTGA GGTTGTTCTTGATCAATGCTTTTGTTACGAGTTCTGATCAAAGCCAGTCA CCTAATGATTGTGTATATTAGAATCTATACTCATggaaatatttacagta ttCTTACAACAATTTCATGCTCGTGTAAAGATTTTCacgttatttttttt tataagaacatgaaataaaattttgaagcctttggatgttcttaactttt taaagggacataacagtatttgcgaaatttgtaaacaaactgtatgcagc ggatacaaaatcaaaacaaatttcacttgtcaaaacaaaaaatcaaacca aatatggctaattttgattgttcaattggtttacaagtttgttttagaca cctgattttaattgttctttttaatgacacgtggctcgcgcaattttgac attttactacttgtaagcctaaaaatgttcttattttgaccattttgtga ggatttttggctattttcctaagaaaaagtacttttttaaagttctaagc cttaaaatgttcttaacttgttcttaacattttggccatcgaagccttat gttcttatatagtttgttcttatataaaaaacgtgtaagattCTAACATT CTTTTATTAATAAAATGATAAACGATTTAAAAACTAATTCAATCATCGAA AAGAcattcatttttgttttataaaaaatacttttattaCTTTAGCATCC GATGGATAAAATTATCTTAATCTCCCTATCTTTCCCAAgatcttgaaaat gaaagacCAATTAGCTTACTTGCTTACTAGCTGTTCTTCACAATCGATTA TCATGTCATTTATACAATAATTGACAaataaaatacacgcttttttttat aagaatggtgttttttcatttcatcatggatattcttaactttttggcga aaatcaccCAAGAATATTCTCACGGTATTCTTAGGCTAAGATCGAacttg gcaatctacaggttaaaatgcattaaaaatgggcATTCTCAGGTTCAGTT GCAAAATTCCATGaaggtgatattcttaccatattcttaattttttggtc attttcatcatggacattcttataaagtgtattcttatttaaaaaaagcg tgtaactgAATCAAGTTACTTTTGGGCACTTTAATATTCTACTACACttt attttttctactttttttttatagtcTCACCAAATCAAATTAAAAGGCTC TACCACAGATTCTCCAACTTGGATAAGTCAAACAAAGGTCGATTAAGGTA TTTCTATATCTAGTAATTGTagtagttttttttaaatcagttaAAACTGA TTACTCGCTGATTTATGTTCTATTAAATTATTATTCATGTCGAATTCAAA TTGTGTAAGCATTTCCAGTGAGAATAGTTTTTATATCgccgttgacaaat caaaagggCCAATCACAAAATTAGTGTCTGAGCAAGCTAAGAGTTTTTCT GCCGAGTAAGCCTTAAATTTGAGATTGGCACTTTTTGCATAGTGAGATAT ACATTAAACATAGGTCAATCTAAAAGATTTATGCTCagacaaacagaaaa attcATAGTTTTCTCAGacaataattttgagattggaccttttAATTGGT CAACGAAGATACACTGCATCTGTTCTAAACTACTACCCAcctttgaaagt tttaaaaagttttgaaaatgaagaagaaccTTAAAAACTTGCTTACAAAA atactaccttaaaggaagaaattttggcggaaagaaaatttgccGGATTT cgccaaaatccgccaaattaagttcccgccaaaatttattttttcctcca tccgccaaattaaattcccgtcaaacTTACTTTATCCagctatccgccaa attaaattccctctgaaaaaactttttcggccatccgccaaattaaattc ccgtcaaacTTACTTTATCCagctatccgccaaattaaattccctctgaa aaaactttttcggccatccgccaaattaaattcccgccaaaatttcttcc tttaaggtatcatGTTGTTATTATGTTTCCAACAAGCACGTAAAAgtcag atatctaagcccgaagggctagataggcaactttaagctttctccagcaa aaaaaagtgaagcaaaaatttgactttttaaatttcgtgccgatggatag gatctagcattttaattgttttcggagcgcgagatcaaaacacgtaggcg gcaaacgctatttcacatctctcaaaccggtgaaattgcatattttagtc acgtgactttggtaggaaatccttccaaacctaggcttcacttttcgata aaagccgcaaatctagcccttcgggctttacagatatctgtggtaaaAGT GTTGTTTCTAAGTATTAAGTTTACTACCGCAGTCAAGTAGTAGTATGCGA CCCCAGTCGGAGATGGCCCGaaagctcctctttcgatagctatctacctg aaTGTAGGCCGATgacgccactctttctccctggattgctccatttaccc ttgatcctttcTCTtatgctgagcatcaagcagagaggcatcaagtacca ttttgggaatctttgttATGACCCGGCTAGGGATCGAACTCACAACCTTG TgaaccgtagctggatgctctaccttcatgctacggtcgcaTAAACATTA TAATAGACAGGGTGAAAGGTTAGCCGTCTAAACTACTACGCCAGGGATTA AACCGTGACCTTGTGTGCCGTAGCTTGATGCTCTACGCTCATTTATGTGT ACTATTTTGATCAATAATTATGTTTTTATAGTGAAGAAGATCTACTACGG ATACCTGAGCTTGCAATCAACCCCCTTGGTGAAAGAATTGTCCACTCCTT CTTCTggtattgaaatgtttttttttgatgtGGTTCTCTActaaaatata aagaaattctTTATACTTTAATCTGATAAATTTTTGCGACTTTGAATTTT GCGTTTTCGTCGTGtaaattttttgccatttttacgAAAATACAACTTGT GAAATCGAAATCTCATGAAAATCAACCTGATTAAAGTAGCAGGAGGAAGA TACTttccagccggcacacaacgttgtttcaaccttcatctaacgttata tggacgttatgaacattagatgaacgttgaaacaacgttatgtgccagcc gGGTTAGTACAATCCTAATTTAGCTACACTAAAGGTGTATGATTAAAGGT AATGGTTGTTTACGTTGTTGAAAATACTCTAAACCCGTAAGGAAACACCC CTTAGAACCTGTTTAAAGTATAGGGAAACCTGATAATCAAATAACTTGAG ATTTTTTGCCTGTACATTCGTTCCATAGATAGTTTTGAGCGAAACATCTA AATCTCTTTATCCAAAGTCGAAATGTGACAATTTGAACTCACtctttgaa aatgggttcttCCGTTGTTCCGTTATTCATTCGATTGTTTTCTTGCTAAA AGTCATAACATTGTAATTTGAATAATGTCttgactttggaaaataattaG ACAAAGTGATTTGGAAAATTCGCCCCAGAACCATTTAGATaatttcgaag caaaatttGATCATTCCTTCAACAGTTCTCTGAAGGGAAAAATTTTGCGG AATCATATATTTGCTTTTATATCAACGAATAATGAgaatactttaagggc agaaactttcgcgggcagaaactttcgcgtttttggtattttttcgcgaa agtttctgccaggtaagaaattaaacaagaaatttgcgaaagttaatttc ccgaaaaatgaaattttcctaaaaatcgcgaaagttttttccaagtttta aaagccgAGGAGAGTCGATATTATCGATATTATCGCAGTAACTAGGATTC GGAATGAGAGGAAGAAGTGCAAATAGTTTATCTTTCCTTTATTACCATAT CACTCTTTCGattgaagaaaataatgagatttaaataattttttattcac tttccctagccactcgcgaaagttattgctactaaaattgaacattcaca aaaaaccgcgaaagtttcttccgtaaattttcttcaaaaagtaaaaatcg cgaaacttaaatccgcgaaatttagcgacttttcggtctcgcgaaagttt ctgcccgcgaaagtttctgcccttaaagtatttAGAATCGAAACAGTCTC CTGTCTCTACCGCTCTTTGCTGACTTTCATCAGGCAAAAACATTTACTTA GACAAAAGGGCCTTTATTCGAttcgaatttttattttgaaagtaaaatac AGTAAAATAAATAGCATCACAAATTGCTCAagataattcgaaaaaattcg aGCGAAATACTAAGAAATAAAGTAAAATATAATTTCTTCTTCACCGCAAT TTAAGTCCTGTTTTGTGAAAAAAAGCAATTccaattttttggacctacct ccgggtaccccggtggaggttctataaattaacccatgtccgtccgtccg tccgtccgtctgttaccagcttttctcaggattggctcattatttttttc tgattttttacacaatgatgcaaaatggcgatgcccaaaatgtgacggag ccagatttttaaggaaaattcttttgggcaaatttgggccaaaaactacc taaaaatagggttttttggactttgtgcaaaatcctgtcattactttttt ctgattttttgtacaaagatggagggcaagattctctaaagaatggctga agtggtttttctcggaaaattcttattcgccttaaaaaacggattttcgt attttggggaaattccctttaaccaaatatgaaaatatagcttttctcaa agttgactcataacttttttctgattttttgtacaaagatggagggcaag attctctaaagaatggctgaagtggtttttctcggaaaattcttattcgc cttaaaaaacggattttcgtattttggggaaattccctttaaccaaatat gaaaatatagcttttctcaaagttgactcataatttttttctgatttttt gcacaatgatgcaaaatgacaatgcccagaatgtgacagagccagatttt taaggaaaattcttttgggcaaatttgggccaaaaacagcttaaaaggtt ttttgggcctgaatggtttaagtgattttcgtatttggggaNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNttttccattctgaatttttgtacaattattgtcacttttttcttat tttcatctgatgttaatcattaggtaggtccattcagcatgttgcttgtt tttttttcagtcacGAGAACGAACCCGGAGTAGAGGAACCTGAAGAAGGG ATTAATTTCACTCAATTCGTCAAGGTAAAGTTTTCACTCAAATAGCTTTT AGATCAGTTTGAATAAGTAAGGCAACTCAATTCGTCAAGGTAAAGTTTTC AGTTAAAAAGCTTTTAGATCAGTTTGAATGAGAGAGGCAAGTCAACTCGT CAAAGTAAAGTTTTCAGTTAAAATGCTTTTAGAtcagttctcaacttcag ttgagctacaatttgacaatgtctgtctgtctgtgtgtgtgtctgtctgt ctgtctgtctgtctgtctatcTGTCTGTatgtcacaaaaactttggggca gcctggagacttcaaaaatggttggatttggctaaaatttgacacacttg ttccttgggtgaatatctgggggtgtttttttcattttttgaaaatttga tttttttgggcctggggacgagtttttcgccaaaacgaggccaaAGCTTt gggggcagcctggagacttcaaaaattgtttgatttggctgaaattttgc acacttgttccttgggtgaatatctgagggtgttttttttatttttcaaa aataatgatttttggggcctggggatgagtttttctccaaaacgaggcca aaactttggggcagcctggagacttcaaaaattgtttgatttggctaaaa ttttgcacacttgttccttgagtGATTATCTTGGAGGacgtatttctttt atttttcaaaaattttgatttttgggggcctggggacgagttttcgccaa gacgaggctaaaactttggggcagcctggagacttcaaaaattgtcggat tttgctgaaatttggcacactttttCCTTGAGTGAATATCTGAggctttt catttttcaaaaatcttgatttttgggtcctggggacgagttttccgcca aaacgaggctaaaactttagagTAGAGCCTACATGCctcaaaaatggttg gatttggctgaaatttggcacactttttccttgggtgaatatctgggggt ctacaattgggcctatgaataatttgaagccactgaagttgagcccagtg cgttgcgcacgttcgactatttcaatttgaataagAGAGACAAGTCAATT CGTTAAGGTAAAGTTTTCAGTTAAAAAAAGCTTTTAGATCAGTTTGAATA AGAGAGACAAGTCAATTCGTTAAGGTAAAGTTTTCagttaaaaaaaggtt ttagatAAGTTTGAATAAGAGAGATAAGTCAATTCGTTAAGGTAAAGTTT TCAGTTAAAAAGCTTTTAGATCAGTTTGAATGAGAGAGGCAAGCCAATTC GTCAAAGTAAAGTTTTCAGTTAAAAAGCTTTTAGATCAGTTTGAATAAGA GAGACAAGTCAATTCGTTAAGGTAAAGTTTTCAGTTAAAAAGCTTTTAGA TAAAAAGCTTTTAGATAAGTTTGAATAAGTGAGGTAAATCAATTCGTCAT GGTAAAGTTTTTTAGTCGAGCATCGCTATTAGCTTCGGGATCAATACGTC ATGGTAAAGTTTTCAGTCAAATGACACTCATATCAATTTGGATAAGAAAG GCAAACCAAATTTGTTAATGTAATGTTTTTGGTCAAGCGTCACTTATCAA CAAGTTATGCAGACCTTAAGTAAATTACTTTATCACTTAAATCAGTTTAA ATAAAAGAGGTAGATCAATATATCAGGCAAATTTTTCAGTTGAGCATCGC CATTAGCTCCGGATAAGATGGGTGAATCAAGTTCACTTAATTCGTCAAGG TAAAGTTTTCAGTCAAATGGCACTTATATCGATTTGGATAAGAAAGACTA ATCAAAATCGTCAAGACAAAGTCTCAAGTCAAATATCATTTGAATCAGTT TATATAAgagagttattttttctttaggTATTGGCACGTTTCCGGAGAGC TGAAAACGGAAAACCTCAACCATTGAATTCCAATGACCACAAATTAGAAT GTAagtacaaaaaaacaaaaccctAAGATCAAATTCACGTAAAatgaatt gatatttttaaaataaaatcttaaaatctatCAGTCTTTTTACGTGTAAG TGTGGTGTCGCTCTAAATTTAAAGCCTGGTAGAcgatagcctatactaga cgtcacagCTTTTTCTCTACACAGTAACttctattccactttgcaatttt ttcgaatgttttgagcccaggttttcgggctccaaaaattcgattttttg acgacactttaaactttcaaagctcttgcagtagcgaaaatatcgaactt gcgtcaaagcacttgaaaggcttctatttttcaaaaatagtcaaagtgga actcactaagaaacggaatgaaaaatcccggtttttggtgaggtgctcgc taggtAGACGAGCTTTGACGTCAAAATCTCATGGCCTCGAAAAATAGATG CCCCTGCATTGTGACCGCAGTTTTTGACAAAGACCAAGCTCACANTGGCC TCGAAAAATAGATGCCCCTGCATTGTGACCGCAGTTTTTGACAAAGGCCA AGCTCACACCATAGTCAATAGAATAAAGAAGAAATTCAATTGACATTACT CAAATGCTACGGTTCTGTTGTGCTCCTAAACGAGATGAAGCCATTCAATT GGTTAGAATTGACGAAAGAATTGAATTTATCCAATAGAAtcgcttcattt cgtttcggagcgaaacgatACTGTAGCGTGTGAACATAGTTAAGATGTCC CTCGACAAAGTGAAAGGCGTGAATGCGTCaaagtattttattttaattca gatgtattgatgttttttttatcttcagtATGCTTTTTGTAGAGCTTCCT AAAAATTCCCTTGTCTAAATGAAGATATTCAATGTctgcatgaacatata aacgactggacatctatcttttattgtctctttgaagcgagcttcgttgc cgcctgtatttcaaaattgctataaaaaatcCGATAATATTCCGtcgtaa ttttatttctttgaattgtttaggtaaaatgattgNcataaaaaatccga caatattccgtcgtaattttatttctttgaattgtttaggtaaaatgatt gatagagcttgaacatatTACTCCTAAtacacaaaaaaaatattttcaaa tttgttcatgagtttgcaatatattttatcaatatttttaactctgaaat gcagaatttcaactgcgtgtatacttttgaatcccttttgtcactccaat aattttttttatgacttgaaaaaaatagcttgccaaNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagaatgtgaca ctctctaaaattattagacacttttaagtcaaaatttggaaatattagtc ggagttttgacaagctgacgatgattttgcttctgttatctttgttatga tatagataaaagacttgagaaaagtagaacaacagatacttttgtcgaaa ttttgacgttgttagcaaggtattcccaagaggtataccatcagaattta ttgtttcatttgatgattttaacgaggcggcagcGAAGCTAGCAgcgtta tcttcaaaaatacaaaggagatggatgtccagtcgtttatatgttcatga tgtCTGTTTATTTTCCAGATGCGTTTAAAATGTATGATATGGATGGAACA CACAAAATTTCCAAAGAAAACATTTGCGAGGTATACAAAAAGGTTTCTTG AATCTCATGATTGATAAATCAAAAGGGCTAAGTCAAAATTTGGGTGTCTC AGAAGACTGAAGGGTTCCTCCGGCTAATGTTTATATTGCTGTTACTCTTT CGTGTCCATTGTACCCTCCTTATTATGTCGCTAAAGCTGGgtgtccactg aaaaaaaaataagttcgTCGCAAATACCtatcgcaaaaaataaatccaga catatgtctggaattaaaaatctattgttcttttttacgaCGAAGTTAAA AAGTAATAAACGATGTAGAATGAaccgttttcatttttcatcgctTTTTT TTCGGTCTATcgcaaataaaacaataggttTTGAATTCCAGACATctgtc tggatttattttttgctaCAAACAAATTCGCGATGAGCTTATTTTTTCCA GTGGATGCCCAGCTTGAATGTTTGCAAGACACTAAATTTGAATTTGGCCC TTTTCACTTGCTCTTATATCATCTTATTTGAATCATACACATACTTTTAA AATGGTAGAAGTCAAGAAGAGAAGAAAACTGGTTTGGTTTTCGGAAGTTT GGTCCGCACATGTCCGTTATATTGTGTATGGTTTCAGAAGCCATTTCGCT AGATAATATGGCCTAGAAATCATCTACGATCTGTACCGAACAAGTCGGAT ACATTAGTTCTCTAGTGCAGGTTTTTCGTTTGGTGGGAATCTCTTGAGCG CCTGTATCTATGTTGTTAGTTAGTATCTTACTAGCCGTCGGCCGGCGTCA CACCCGCGGAGTAAAGTGTTGCTTCCGCACGATCAATCCCTTTGGGTGGA TGGGAGGGTAAAAAGATTTGATTTTaagtcaaaaagaatgaaaCTTTATC TCTTAAAATCGATCAAAACTCGAAAAacggcaaaaaaatttaatataatG TTCCGTAAAGTTTGCTACCcagttagtttttttaaatcttctcTGCAGAT TTTAACATTGATGGTGGGATCAAATAAATCGAGCGAACAACTGGCGGCCA TCGCTGATCGTACCATACAAGAAGCTGATGAAGATAAAGATGGCTTTATC AATTTCGATGAATTCAAAAAGGTTTGTCGGGTTAATCATCGCGAGAGTAA ATTTCCCGTTTCCTGAATTTTTAACATAATGCGCTAAATGAAAACTCGCG AAATCTTTGAATTCAGATTTTCAGTGTGACGTATAAGCCATATATAACTT TTGGTTTGTGAAGTTTAATccatgcaaaatttttaaaatactgATTCGTT AAAATTACATGGGAATGaggataccttatcggccaaaacttaaaattagg gccgactaaaaattagggccgactaaaaatttagaaatggccaaaactta tAAATTGTGattaaaattagggccgactaataattaaggccgactaaaat tagggccgactattAATTAAGGCCGattaaaattaaggccgactaagttt tggccgccGATAAGGTATAAGATTTTAAGGGTTTAAACGAATCCCCGGTC ATAAGaattttgaccccccccccNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNccccccccccctcccctcAGACAAAAACTTTCAACTATAAAGTCA GATcggtgtcaaaatcaaaacgtcgggtcgtaatatcaaaccGTCAGATC GTTGGGCCGAACCGTCAGGCCGTAATGTTAAACTGTCAGATCGTCGGGTC aaaccgtcgggtcgtaatctaaaaggtcaggtcgtcgggtcgaaccgttG GGTCGTAATCTCAAACTGTCagatcgtcgggtcgaaccgcCGGGTCGTAA TCTCAAAAGGTCAggtcgtcgggtcgaaccgtcggatcgtaatgtcaaaa ggtcaggtcgtaatatcaaagggtcaggtcgtaatatcaaaaggTCGGGT CGTGATGTCGAACAGCCGGGTCGTAGCGTCGAACCAGACTGCCGGGTTAA ACTGCCGGGATACAATGCCGGATTATCGGGTTTATCGGGCTTATCAGATT AGTTAAAATCTCGTTCCGCAGAATACTGTAAACTAAACACTATAATAATA AGAACAAAAGTGGAAGCAAAATGAAAGCGAAATAATTTGATCAGTGAAAT GTTTATAGGTCTTTATATTTTTACCACTGATTAAATATACTTTCAGGTGT CTATAACATGTTTATATTATCAAAATCATGAAGTGTTCTTATTCaactat ctttgtgcaaagtttcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgagatttctattttctctcg aaagtgtgcatatggatctgagaagtgaatgaaactcatcaagacaagaa agcctttttcaaagaagattttcatggttcgtcgtacttcaaaatatggg acatttttgttcatccaatgacttgaaaaatcaactctggAGACTTGTAG TCTACATAATAACTTCAGAATACTTCGATAGAATCATGGAACAACGCgga tattattttctcgataaaagcactgtatcatgagattttgcacgaaccaa ataaaatgaagtgaaaagtaaCTCTACGATGAACGAAAAACTCTGNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNgggggggggggtactaggtttgcgaggtgacgggtatgtc cgagccgaaaatcgaaaatcgaccctttgaaagacaaaattttggttatt ttgggaccctttgagagactttttcctaaattttggtccattttttccaa attttggcaaattttgctcaaaatttttggaaatcgtgaccctttgagag agaaatttttgattttcgtgattttgggaccctattatgagactaacttt tgaatttgtaaagggttgagagacttttgaggaaccaatgagaaaaggta cccttatggctcgcacatacccggcacccattttgcctaagtaccccccc ccccccggggggggaaaaatttttttttttaaattaaattttttttcccc cccggggggggaaaaatttttttttttaaattaaattttttttccccccc ggggggggaaaaatttttttttttaaattaaattttttttcccccccggg ggggggacacattgatttgattaaatttaaaatcctgtgactatcattga aaattaagatcaaaCCATCGATCAAGGGACTTTGTCTTCTTGTGCTTCTG GCATGGTTCGCTACATATCTCTACACCCTTTTTGAAAGACCTCGTACATG CTATGATTTGGGAACagttgaacatatttttcatgtaccaGTTTGTTTCG TGATGGATAGACATAGttgcattttttacagtggtatggatatgctgctg ttagaagaactgtttacattttatttacgttgttaacttgagtgaatgtg gaatattgtgactgatgttgtatgaagtgacgataaatacatatactcaa tgttaaaattttaagatattaaaaacattttctgctaaaaaaaggaagta ttttttcaccgacagtttcgataaaattttatttactaggcaactttttt ccctatgattatgaagtgctactgtgagaaaaattctgagggtgctttaa ctgagaattttttttttgaattgaaagaaatattttggaaggcaacttca aagaggaggtcatattattattcaaatacttttgcatCACTCTTGTTAAA AGTGAAGCCATAAAGTATTTGTAAATACTNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNagaatttgtaaatactttatatag ttttcaaaatccaaatgtatatacaggaattttgtaatgtgatgttattt ttttcaaaaaatgtttcatgctttatttactatttgttactttgttcatc tgctcttgatgaaacacaaagaacacaggaaaacaaaaaagaactgtGCA TATCTTCTCATCCCACAATCTCTTTGTGTATAGAAAAACTCTTGTGTAGT ATTTACATTtgtgaatcaattttggcatagcaaaacagaaaatttccttc atataagtatgatacaagacagaagaaattacacgaaagatttttcattc ccctcccaacttcgaacttttttatgcaaagtatttttcggtttgtttag attacgaaaacgaaagtgaaaatcccgttcgaccaatcaaattgtaaact ttcatcgcgctcgaccaatcaaattccagacacgtgaccataatattttg atttgcgtagtattggattatccctttaaaaaatgatattttacagaacg atGTTAAATATCCCGATAAACCGGCATTGGATCCCGGCGGTCTGGCTCGA CGCTTCCATATGACCGTTCGATAATACGACCCGACCTTTTGACATCACGA CCtgaccctttgatattacgacccgaccctttgatattacgacctgacct tttgacattacgacccgaccctttgatattacgacccgaccctttgatat tacgacctgaccttttgacattacgacccgaccctttgatattacgaccc gaccttttgacattacgacccgaccctttgatattacgacccgacccttt gatattaagacccgaccctttgatattacgacccgacgacctgacctttt gacattacgacccgacggttcgacTCGACGATCTGACAGTTTGACATTAT GGCCcgacgttttgattttgacaccgATCTGACTTTATATTCGACCTTCA GGAAACAAGCTCGAAACCGCACGGGAAACACATTTGTTccagttaaggaa atttcgtgTTAAAGATGCTCCACTTTATATACGagtaaaacattttaaaa gttttctttcaataattCAGTAATTCAGTAGCTTAAAGGTTTCGTTATAT ACAAGAGAAATGAGTAATGAGTAaaacataaaacataaaatatttcgGCC TCTTATACAGCTGTCTTTTTTCAAGTTTCCTCTGTATAACGGTTCAACAC TTCTATCTTTCCCTTTCTTTCAGGTAATGGCGAAGACTGATTTTCAACAG AAGATGAGTATCCGATTTTTGGCTTGAAAAAGTTTCAATATTTCAGCTTG GTTAATGATTGTTAGTGAAGAACCTCCTTCCTGCGTATTATCATCTTTTT ATATTCTTACTGATAGTGCCAGATAATATTCCATCatagtcaatataaaa aaacccGGTCTGGCaggcttttgtttctttcttttgttaacAGTTAGAGC TTGCGTTCGCAAATCGGCTTGTTTTGCATacattttgatcatgtgattag aaattAGGCCAATTAGAgaatttggtaacgtgatcaaaaagtatgcaaat ctcAACTTGCATTTTGGTtataacaaaggaaaattttacaacaaagctaa aacaataccttgccagaccagagtttttttataaagactaTGATTCCATG GCGttcatcagtaacgtaaataaagcctggaatacacgtgGACGAGGTTG GTTAGTGAAACATTCtgaaagtattttttaacaaaagggAAGTGTGATAG TGTGATTCATTTATTTAGACGATTTTATGACAGTGAAAGCCCTCAGGTAT TGGTTATAGTTATAAACACGTTTTTCATAAGAgcaatataagaacataag gctttaatGGCCAGaatgttaagaataagttaagaatactttaaggcttt ttgtaCTCGAAAACATCCGATTTTTTAggaaatacacctttttgaccgta gtcgcgcggtcaggcgcctGCCACTTTATTACTTagtttaccaccctaaa ctcgatccaatcctttttttacacttttttctactgtctctaggtgcgaa aaaagactgggacggtttaagggtggtaaaacggacaaaaaaatgaccGT GCGGCAATTGGCGTctacggtcgaaaaagtgtattGCAAATACGAACGTT AAGAACGTTCAAAGGCTTTGTTATTATGAAAAAACATGCAATGAGAGTCC TGAAACATTGgtaatacagggtgtccggaaaaaagtatcgagccgtacca cttctatagaaagaaagttcttgtgtgtgtttcactaaatttgtaatgtt tatcaaagtttctctgtGTGATATgaattgtcatgagacatcttttatta ataaattttacaaaaaacaattctcaataactttaacttcgtcaaaattg taaagaaagttaattctttttaatcataatgacttttgtaaaaaaattat tgtgttggtgtatattttcttacattttattaaacacacgcaacaacctt ctaccCCGAATCATGTttgaactcgatacttttttccggacaccctgtag ttaCATTTCGCATGCATGTGTGTCTGAAATTAGTATTTTGATCTGAGTAT GAATTTTATAATAAAACTTTTCTGATGACCATATCTATACAATAGCAATC AAACGATAGTATCGTTGAAAATAATGGCAAGTTTGTAGAAATCTAGAAGT CATAGTAGGATTTgttacaaaaatctttttcgccTAAGAAAGtttattat taaatttttatttaaatttaaaagaagTTATTATTTTATATATCTTTTTG TTTTAGCTGAAATTGtatctaaaatatttcaatttgaagatAGTATCCTG ATTTCTTGTATTTAATTTAGATATTAAGGCCTATTCCACGTGCTTTTAGA CCATGCTCGCACGGAACGGTTCcttttcgctccgaaacgagatgaagcta ttctattggttagaagtgacgtaaaagttGAATtgaaccaatagaatggc ttcatttcgttccGGAAAGAAACAAAATCGTAGTTTGTGAACGTGGTTTT AGAATACAAGAATAAAAGATTTTATGAAGTGCATCGTTTTTATATGATTT AAGCACTTTCTTTGTCAAACTCCTAACCGTAAATTGCTATTTTCAGAata gttaaaataaaaaattgaccaatttaaGGACTGGGGAATGAGTTTGAGGT GGTACTGGAAATGTCtttttactttaatgggattaattttcacggggatt aaatttcgcgggttttGCAGATTTCGTGgatttcgcgaaattaagtcgga catttggaaaggccttatccacaaaatattttcaaacaaaactcaaaaaa tgtcaaatataaactacttttaaaatgtttactggcgacaaagaagcgct aataatgaaTAATGCTTGAACAAACAACATGCGTGATTTGGCAGTAAAAG TTataaaatcgtgaaaatatgagaaatttaatccccgcgaaaatttatcc cattaaagtaaaaagatttttgatgaACATCAAGACAAATAAAGTGTTAC GGTACAAGAAAATTGGGGctaaatgataattttttatatattacTTAACT TGAGTTTGGTTatttcattattgtatttgtaaTTTTATCCTAATTATATA AAAGTGCACCCATTTAATTATTTCAATTTGCATCTCTACACCTGGTATTA TCTTACGGAAATATAGGTTTTGAAACACGTTactttaaatcaaatcaaat taattAAGCGTATTTGTTAATACACCTTtccgaccgtagccaccaattac CGTGCCtgcattttttgtccgctttatcccactaaaactgtcccagtcct tttttcgcacctatagacaatagaaaaatgtgtc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042456XLOC_042456Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067984-exon-scaffold_478-1491911889:186871..187002TCONS_00067984-exon-scaffold_478-1491911889:186871..187002Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1510915933:186871..187002TCONS_00067984-exon-scaffold_478-1510915933:186871..187002Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1575043694:186871..187002TCONS_00067984-exon-scaffold_478-1575043694:186871..187002Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1491911889:189395..189467TCONS_00067984-exon-scaffold_478-1491911889:189395..189467Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1510915933:189395..189467TCONS_00067984-exon-scaffold_478-1510915933:189395..189467Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1575043694:189395..189467TCONS_00067984-exon-scaffold_478-1575043694:189395..189467Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1491911889:191002..191076TCONS_00067984-exon-scaffold_478-1491911889:191002..191076Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1510915933:191002..191076TCONS_00067984-exon-scaffold_478-1510915933:191002..191076Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1575043694:191002..191076TCONS_00067984-exon-scaffold_478-1575043694:191002..191076Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1491911889:193631..193694TCONS_00067984-exon-scaffold_478-1491911889:193631..193694Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1510915933:193631..193694TCONS_00067984-exon-scaffold_478-1510915933:193631..193694Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1575043694:193631..193694TCONS_00067984-exon-scaffold_478-1575043694:193631..193694Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1491911889:195548..195620TCONS_00067984-exon-scaffold_478-1491911889:195548..195620Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1510915933:195548..195620TCONS_00067984-exon-scaffold_478-1510915933:195548..195620Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1575043694:195548..195620TCONS_00067984-exon-scaffold_478-1575043694:195548..195620Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1491911889:197389..197450TCONS_00067984-exon-scaffold_478-1491911889:197389..197450Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1510915933:197389..197450TCONS_00067984-exon-scaffold_478-1510915933:197389..197450Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1575043694:197389..197450TCONS_00067984-exon-scaffold_478-1575043694:197389..197450Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1491911889:198419..198541TCONS_00067984-exon-scaffold_478-1491911889:198419..198541Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1510915933:198419..198541TCONS_00067984-exon-scaffold_478-1510915933:198419..198541Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1575043694:198419..198541TCONS_00067984-exon-scaffold_478-1575043694:198419..198541Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1491911889:203194..203284TCONS_00067984-exon-scaffold_478-1491911889:203194..203284Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1510915933:203194..203284TCONS_00067984-exon-scaffold_478-1510915933:203194..203284Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1575043694:203194..203284TCONS_00067984-exon-scaffold_478-1575043694:203194..203284Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1491911889:204014..205854TCONS_00067984-exon-scaffold_478-1491911889:204014..205854Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1510915933:204014..205854TCONS_00067984-exon-scaffold_478-1510915933:204014..205854Clytia hemisphaericaexon
TCONS_00067984-exon-scaffold_478-1575043694:204014..205854TCONS_00067984-exon-scaffold_478-1575043694:204014..205854Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_478supercontigscaffold_478:186871..205854 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.97318 5.5884 2.24415 4.76996 0.174406 2.53456 9.03919 7.08657 15.0773 10.6107 15.463 11.1468 18.0215 16.347 10.4004 11.3656 14.7254 18.6308 15.6428 15.5633 14.6795 14.8973 5.40919 8.51043 7.53275 0.0546742 12.46 10.982 10.0533 4.64671
Blast
BLAST of TCONS_00067984 vs. Swiss-Prot (Human)
Match: CHP1 (Calcineurin B homologous protein 1 OS=Homo sapiens GN=CHP1 PE=1 SV=3)

HSP 1 Score: 196.438 bits (498), Expect = 2.369e-57
Identity = 102/203 (50.25%), Postives = 139/203 (68.47%), Query Frame = 3
Query:   63 MGSVCATIQLQDEDIAQIQNITGFSPNQIKRLYHRFSNLDKSNKGRLSEEDLLRIPELAINPLGERIVHSFFCHXXXXXXXXXXXXINFTQFVKVLARFRRAENGK-------PQPLNSNDHKLEYAFKMYDMDGTHKISKENICEILTLMVGSNKSSEQLAAIADRTIQEADEDKDGFINFDEFKKVMAKTDFQQKMSIRFL 650
            MGS  +T+ L+DE++ +I+  TGFS +QI RLY RF++LDK   G LS ED  RIPELAINPLG+RI+++FF    +         +NF  F++ LA FR  E+ +       P+PLNS  +KL +AF++YD+D   KIS++ + ++L +MVG N S EQL +IADRTIQEAD+D D  I+F EF KV+ K D +QKMSIRFL
Sbjct:    1 MGSRASTL-LRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFPEGEDQ--------VNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVDVEQKMSIRFL 194          
The following BLAST results are available for this feature:
BLAST of TCONS_00067984 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CHP12.369e-5750.25Calcineurin B homologous protein 1 OS=Homo sapiens... [more]
back to top