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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067946 ID=TCONS_00067946|Name=TCONS_00067946|organism=Clytia hemisphaerica|type=transcript|length=961bp
gCAGTTTATAGACTTATCTTAAGATCTTAAACGTCCTCAgttttaaaact
cagagttaactCTACCACCCATCCAACCTAAGTTAAAACGCTTGCAAATG
GTTTTACGATCTTGATTGTAGCATCAACAGTTTCACATCAACAAATCTTG
GAACGTCATCTCcatgaaataattttatttcaaaaaatataaaaaatata
tttttacaatCAAAAAACATAGTCTAAaactaaatcaaaagttatggcaa
ATTTGTTTCCCCACTGCAaattaagggaactaattttcgctacCCAGCCA
GGGTACCAGAGGCCAAATTTTCATCCGAGAAAATATTCACGgtaaatttt
tgcgggaacaaTTTTTCCCACGAAAAGAACCTACGAATTACAAAGTGGGc
catttttcaccaaaaaaattgtaaaacccCTATGAAAACGAAAGAAATGT
GTCCAAATAGGGCAATATCGCGAAATAAGATTCGTTCGAATTTTTTTCCT
ACCGTGAAAGaattagttcccgctaaaattagCTCCCTTAACGTAGTCTG
CAATCAAATTTTAGATTGAAGTTCATTGGCGGAcaaatgtttattttatt
ttatctatatTCAGTTAGTTgagaaataataattttcaaaaattgaccaa
aTCTAACATTGTATTGGAAGAAAAAGGTTAGAAAACTATACCATTaaaat
ctaaaatcaaaataacacaGATAAAAGTATTAGTATCAGCAAATGAGATA
ATTGACATTGATAAAAGTTCTGAGGCCAgctcataaaaaataaaaattta
ttaaataCTATGAAAAAATACCTATAAACAATCAAGAGCGATATAGATTA
GAAAACTATGGAACAGAACAAGTGCAGTGAAGTCTCGAaatctttcaaat
gaaaaatcattaaaataaaaaacattgtttGACATTATGAATTCGCATTA
AAAATCAACNN Run BLAST on NCBI transcript from alignment at scaffold_477:129016..129976 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067946 ID=TCONS_00067946|Name=TCONS_00067946|organism=Clytia hemisphaerica|type=transcript|length=961bp|location=Sequence derived from alignment at scaffold_477:129016..129976 (Clytia hemisphaerica)
NNGTTGATTTTTAATGCGAATTCATAATGTCaaacaatgttttttatttt
aatgatttttcatttgaaagattTCGAGACTTCACTGCACTTGTTCTGTT
CCATAGTTTTCTAATCTATATCGCTCTTGATTGTTTATAGGTATTTTTTC
ATAGtatttaataaatttttattttttatgagcTGGCCTCAGAACTTTTA
TCAATGTCAATTATCTCATTTGCTGATACTAATACTTTTATCtgtgttat
tttgattttagattttAATGGTATAGTTTTCTAACCTTTTTCTTCCAATA
CAATGTTAGAtttggtcaatttttgaaaattattatttctcAACTAACTG
AatatagataaaataaaataaacatttgTCCGCCAATGAACTTCAATCTA
AAATTTGATTGCAGACTACGTTAAGGGAGctaattttagcgggaactaat
tCTTTCACGGTAGGAAAAAAATTCGAACGAATCTTATTTCGCGATATTGC
CCTATTTGGACACATTTCTTTCGTTTTCATAGgggttttacaattttttt
ggtgaaaaatggCCCACTTTGTAATTCGTAGGTTCTTTTCGTGGGAAAAA
ttgttcccgcaaaaatttacCGTGAATATTTTCTCGGATGAAAATTTGGC
CTCTGGTACCCTGGCTGGgtagcgaaaattagttcccttaattTGCAGTG
GGGAAACAAATttgccataacttttgatttagttTTAGACTATGTTTTTT
GattgtaaaaatatattttttatattttttgaaataaaattatttcatgG
AGATGACGTTCCAAGATTTGTTGATGTGAAACTGTTGATGCTACAATCAA
GATCGTAAAACCATTTGCAAGCGTTTTAACTTAGGTTGGATGGGTGGTAG
agttaactctgagttttaaaacTGAGGACGTTTAAGATCTTAAGATAAGT
CTATAAACTGc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067946-exon-scaffold_477-1491911889:129016..129976 | TCONS_00067946-exon-scaffold_477-1491911889:129016..129976 | Clytia hemisphaerica | exon |
| TCONS_00067946-exon-scaffold_477-1510915933:129016..129976 | TCONS_00067946-exon-scaffold_477-1510915933:129016..129976 | Clytia hemisphaerica | exon |
| TCONS_00067946-exon-scaffold_477-1575043694:129016..129976 | TCONS_00067946-exon-scaffold_477-1575043694:129016..129976 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_477 | supercontig | scaffold_477:129016..129976 . |
Blast
The following BLAST results are available for this feature:
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