TCONS_00067945 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067945
Unique NameTCONS_00067945
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length131

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067945 ID=TCONS_00067945|Name=TCONS_00067945|organism=Clytia hemisphaerica|type=transcript|length=131bp
ctaatatatatatattttacaaaagtaaCCCTTAAAGATATAGATTATTA
AAATGATGTTTATGTACCCAGCTGCCACAAAGCGTCCATAAAACCATagt
tattataaaaaacccaGGTCTGTAAGTATTT
Run BLAST on NCBI

transcript from alignment at scaffold_477:100929..101059

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067945 ID=TCONS_00067945|Name=TCONS_00067945|organism=Clytia hemisphaerica|type=transcript|length=131bp|location=Sequence derived from alignment at scaffold_477:100929..101059 (Clytia hemisphaerica)
AAATACTTACAGACCtgggttttttataataactATGGTTTTATGGACGC
TTTGTGGCAGCTGGGTACATAAACATCATTTTAATAATCTATATCTTTAA
GGGttacttttgtaaaatatatatatattag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042428XLOC_042428Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067945-exon-scaffold_477-1491911889:100929..101059TCONS_00067945-exon-scaffold_477-1491911889:100929..101059Clytia hemisphaericaexon
TCONS_00067945-exon-scaffold_477-1510915933:100929..101059TCONS_00067945-exon-scaffold_477-1510915933:100929..101059Clytia hemisphaericaexon
TCONS_00067945-exon-scaffold_477-1575043694:100929..101059TCONS_00067945-exon-scaffold_477-1575043694:100929..101059Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_477supercontigscaffold_477:100929..101059 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067945 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top