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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067937 ID=TCONS_00067937|Name=TCONS_00067937|organism=Clytia hemisphaerica|type=transcript|length=920bp
atcgctttttggtcattcgccaaattaaatccatgccaaaatttatccac
ttaaggtatgcTTGCTTCACCTTTTTGTATATCCTAAAATCGATGTCATC
TTATAGACCTCTCTTGGTGTCCAATATCCTCAACACCCCCTGTGCAATAT
TTTTTCTGACACACTTTTCTCCTAATTTCGCGAGCTGCACTAAATTAAAG
AAGTCTTATGTTCACTAAAACAGAAAAGAGGTgaaatatttattatatat
CTTGTTGATTatagaaacatttgaaaaatcatttttggacctaccccgga
gTCATACAAAAAGTGATGGAGCCCCattttcgggaaaaaatttttagggc
aaattttggccaaaaagtgcctaaaaatagggtgtTTTGGCTTTGTATGA
GATtgcttcagatttttttttcagattattttgcaTAAAACATCGGAAAG
CCAACGTGAAACAAGTTGCACCATGTTTTTCAAGCTAACGTATCTCTATG
CTATGCtgttctcttttcttttttgttcgaATATTTTCATTTCCACTCAG
CATGTTTCCGACTTGCTATATCTGGTAGGtgcattcagcatgttgcttgt
ttctttTGTATCTAATAATTATTCGACTATTCCTAATCATATTTTCGATT
TCTAAAGAACTTTACAGAATCATTTATTacaaatattttactttttttgg
gaTAAAAAGTTTACTAAGTTAGAATATTGTTAAAATAACAAGTTTGTAAA
TtgatttagtttttttattagTAATTTAGTATAAAAGAATTCCGTATTTT
ATGACTTCCCAAAATAGGTTAATTTTCAACTGTAGCACTTTTATTTTAGA
CTAtgtaataattatttttttttaatttttagtgttttctgcattagaaa
aaataatattctTGTTTGGG Run BLAST on NCBI transcript from alignment at scaffold_477:517384..518530- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067937 ID=TCONS_00067937|Name=TCONS_00067937|organism=Clytia hemisphaerica|type=transcript|length=1147bp|location=Sequence derived from alignment at scaffold_477:517384..518530- (Clytia hemisphaerica)
ATCGCTTTTTGGTCATTCGCCAAATTAAATCCATGCCAAAATTTATCCAC
TTAAGGTATGCTTGCTTCACCTTTTTGTATATCCTAAAATCGATGTCATC
TTATAGACCTCTCTTGGTGTCCAATATCCTCAACACCCCCTGTGCAATAT
TTTTTCTGACACACTTTTCTCCTAATTTCGCGAGCTGCACTAAATTAAAG
AAGTCTTATGTTCACTAAAACAGAAAAGAGGTGAAATATTTATTATATAT
CTTGTTGATTATAGAAACATTTGAAAAATCATTTTTGGACCTACCCCGGA
GTCATACAAAAAGTGATGGAGCCCCATTTTCGGGAAAAAATTTTTAGGGC
AAATTTTGGCCAAAAAGTGCCTAAAAATAGGGTGTTTTGGCTTTGTATGA
GATTGCTTCAGATTTTTTTTTCAGATTATTTTGCATAAAGTTAGCAGGCA
AGGTCTTTAAAAAGTGGTTGTAGACGTTTTGTCTGGAAAAATTAGAATTT
TTTTTTTCGTGGGAAATTCCCTTTTATCATTTTTAGGGGAAAATGAGCAT
TTCTCGCGACTGCCTTAGTATTTTTTTCTGATTTTTTGTGCAATGGTGTA
AAATGGTAATGTTTAAAGGATTTTTTCGAATCTGCCCTAACCTCCTTGGG
GCTCCTTCGCTCTAAGACATCGGAAAGCCAACGTGAAACAAGTTGCACCA
TGTTTTTCAAGCTAACGTATCTCTATGCTATGCTGTTCTCTTTTCTTTTT
TGTTCGAATATTTTCATTTCCACTCAGCATGTTTCCGACTTGCTATATCT
GGTAGGTGCATTCAGCATGTTGCTTGTTTCTTTTGTATCTAATAATTATT
CGACTATTCCTAATCATATTTTCGATTTCTAAAGAACTTTACAGAATCAT
TTATTACAAATATTTTACTTTTTTTGGGATAAAAAGTTTACTAAGTTAGA
ATATTGTTAAAATAACAAGTTTGTAAATTGATTTAGTTTTTTTATTAGTA
ATTTAGTATAAAAGAATTCCGTATTTTATGACTTCCCAAAATAGGTTAAT
TTTCAACTGTAGCACTTTTATTTTAGACTATGTAATAATTATTTTTTTTT
AATTTTTAGTGTTTTCTGCATTAGAAAAAATAATATTCTTGTTTGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067937-exon-scaffold_477-1575043694:518092..518530 | TCONS_00067937-exon-scaffold_477-1575043694:518092..518530 | Clytia hemisphaerica | exon |
| TCONS_00067937-exon-scaffold_477-1575043694:517384..517864 | TCONS_00067937-exon-scaffold_477-1575043694:517384..517864 | Clytia hemisphaerica | exon |
| TCONS_00067937-exon-scaffold_477-1510915933:518092..518530 | TCONS_00067937-exon-scaffold_477-1510915933:518092..518530 | Clytia hemisphaerica | exon |
| TCONS_00067937-exon-scaffold_477-1510915933:517384..517864 | TCONS_00067937-exon-scaffold_477-1510915933:517384..517864 | Clytia hemisphaerica | exon |
| TCONS_00067937-exon-scaffold_477-1491911889:518092..518530 | TCONS_00067937-exon-scaffold_477-1491911889:518092..518530 | Clytia hemisphaerica | exon |
| TCONS_00067937-exon-scaffold_477-1491911889:517384..517864 | TCONS_00067937-exon-scaffold_477-1491911889:517384..517864 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_477 | supercontig | scaffold_477:517384..518530 - |
Blast
The following BLAST results are available for this feature:
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