TCONS_00067900 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067900
Unique NameTCONS_00067900
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2114

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067900 ID=TCONS_00067900|Name=TCONS_00067900|organism=Clytia hemisphaerica|type=transcript|length=2114bp
GGAGGAGTGACTCACCCAGCCCAGCCAACGCAACAGCCAACTCTACAGCA
CCTTCACCTGTTCACTCAAGTCAAAGCTCAAATAAATGGCTTTAAAACCA
GTGAAAACCAATgataaatttttgttaaaagaaaGGTATTTTTGCTCTCT
CTTCTGATTACTATTACAATTTTTATCTTTTACAGTTTGTTGATAGAGAA
ATATGGCAATGGATTTAAGCAGAAAAGGAGCGAGCGGTGAAAGGAAAATG
TTGGGTATTCCGATTGTTTCATTAGCAGTTATAGCTGCTGTATTCATGTG
TGTTGTTTATTATGCTTCTGGATATGCTTCTGAAAACACTAAATTAATAG
AAAAATATGGAATTGCTAGGACAAAAATTTTGAGCCTTTCCAGAATGGTT
GAGAAAATGAGCTCAAATCAAAAGATATGTCAAAGCAACCTTGGTCAAAA
TGAGCAATCAAATAAAGAGCTTACTCTGCAAGTTAGCCGTTGCAAATCgg
caaaagaagaagaagaaacaaagaGTAAACAATGTCAAAGCCAGATAACT
ACCTTCCAGCGATTCTATTCTGCAGTGAAGgaaaaactAAATCATGGAGA
AAATGGGGAAGTAACAGCCACAGTTGACACAAAATCAGATTTGGATAACA
CTATAGATGGTATCGTTAAATTAAACGCCAAAATCTCTAAACTTGAGGAA
GATCAATCAAAATGTTCTGAAGTTGAGAAGGAGTTTGAGGAATTGAAACG
ATCTACTGAAACAACAAATTCTCAGATCAAAGCACTTGCGACAGAAAAGG
AAGCACTAAATGACGAATTGAAAAATGTTCGAAAATTGTTGGAAGAAGCT
aatgcaaaaatttcaaatttcgacGACCATCAACATAAAAGAagttttca
aaggaagaaaattcCTGAACAGGATAGAAATGTAAAAGAGGAGATTCTCA
ATGAAAAGAAAGNATTCCTGAACAGGATAGAAATGTAAAAGAGGAGATTc
ttaatgaaaagaaagaacaacCTAAGCCTGTCAACCATGAATCTGGGGTT
GTAGATAGCTTAAACAAAGCCTCGTCTGTTTCTGGTAATAATAGTGCTAG
TAGTGTAGTTCACAAAGCTATCAACGTCACTTCGAGTGATGCAAGAAATA
CAACACCCACAGAAGCTGATAGCGAACAAACCACAACCAATACATCAACC
TCTTTTACCAAGACTAATACCTCAACCGCGTCGCCAGAGTTATCAACAAC
CACCAAGAAGGCTCTGGTCACAGAAGAAGACGACGATTTGGAAGGTGGAT
TCAATGATACAGCAGATGAACAAAGCAATAAAGAAGATTTTGATGCAGAA
CCGAAAAATAATCCGGAGTTCGTACCTGCAAACATGAAGTAATTACGACT
GACattaaatacactttttctttgAATGGTTAGATAGAATGTTTTGTGTG
AATTGTCCTTGTcatacatacacgttttttttcataggaacatccaacat
ttttgaagccttaggatgttgTTAAATCTTTTAGTTTcaagcctgaaatg
ttcttaaacatgttcttattttgaccgttttttgagcattttagtcaatt
ttcctaagaaaaaggatgtttttgagtgcgcaaagccttaaaaatgttct
taacttgttctttacattttggccatcgaagccttatgttcttatatagg
ttgttcttatataaaaaaacgtgtacacataCTTGTGCTAGTTTCGTGAT
AAGAGAACCGTGACGGATATTTCGCATCTATAAAATGACCGATGAAATTC
GGACTATTTGGAATGATGGGTGTGAAAACTCTTGTAATTTCTATGTAGGT
TGTTTTGCGTTTCTTTTCTTACCGTAAAGTCAGTTTCTAGTAGTTTTATG
TCCATTTCTATCAGTAAACAAATAATTTTATCGAATTTGTTTTTGAATGT
TGATGATTTCAGCCGCTTTCTCAGATacattctttttatatttttttaat
NTTGATGATTTCAGCCGCTTTTTCAGATacattctttttatattttttta
atgtacaattttttaaagatctTTCAATATTTAATTAAATGAAGAAATAT
ATTTGATAAAGAGG
Run BLAST on NCBI

protein sequence of TCONS_00067900-protein

>TCONS_00067900-protein ID=TCONS_00067900-protein|Name=TCONS_00067900-protein|organism=Clytia hemisphaerica|type=polypeptide|length=261bp
MAMDLSRKGASGERKMLGIPIVSLAVIAAVFMCVVYYASGYASENTKLIE
KYGIARTKILSLSRMVEKMSSNQKICQSNLGQNEQSNKELTLQVSRCKSA
KEEEETKSKQCQSQITTFQRFYSAVKEKLNHGENGEVTATVDTKSDLDNT
IDGIVKLNAKISKLEEDQSKCSEVEKEFEELKRSTETTNSQIKALATEKE
ALNDELKNVRKLLEEANAKISNFDDHQHKRSFQRKKIPEQDRNVKEEILN
EKKXFLNRIEM
Run BLAST on NCBI

transcript from alignment at scaffold_477:263127..271723-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067900 ID=TCONS_00067900|Name=TCONS_00067900|organism=Clytia hemisphaerica|type=transcript|length=8597bp|location=Sequence derived from alignment at scaffold_477:263127..271723- (Clytia hemisphaerica)
GGAGGAGTGACTCACCCAGCCCAGCCAACGCAACAGCCAACTCTACAGCA
CCTTCACCTGTTCACTCAAGTCAAAGCTCAAATAAATGGCTTTAAAACCA
GTGAAAACCAATGATAAATTTTTGTTAAAAGAAAGGTATTTTTGCTCTCT
CTTCTGATTACTATTACAATTTTTATCTTTTACAGTTTGTTGATAGAGAA
ATATGGCAATGGATTTAAGCAGAAAAGGAGCGAGCGGTGAAAGGAAAATG
TTGGGTATTCCGATTGTTTCATTAGCAGTTATAGCTGCTGTATTCATGTG
TGTTGTTTATTATGCTTCTGGATATGCTTCTGAAAACACTAAATTAATAG
AAAAATATGGAATTGCTAGGACAAAAATTTTGAGCCTTTCCAGAATGGTT
GAGAAAATGAGCTCAAATCAAAAGATATGTCAAAGCAACCTTGGTCAAAA
TGAGCAATCAAATAAAGAGCTTACTCTGCAAGTTAGCCGTTGCAAATCGG
CAAAAGAAGAAGAAGAAACAAAGAGTAAACAATGTCAAAGCCAGATAACT
ACCTTCCAGCGATTCTATTCTGCAGTGAAGGTTAGTTTTTATCTTTGTAT
ATATCCAGACGATCTCANTAGGAGGAGTGACTCACCCAGCCCAGCCAACG
CAACAGCCAACTCTACAGCACCTTCACCTGTTCACTCAAGTCAAAGCTCA
AATAAATGGCTTTAAAACCAGTGAAAACCAATGATAAATTTTTGTTAAAA
GAAAGGTATTTTTGCTCTCTCTTCTGATTACTATTACAATTTTTATCTTT
TACAGTTTGTTGATAGAGAAATATGGCAATGGATTTAAGCAGAAAAGGAG
CGAGCGGTGAAAGGAAAATGTTGGGTATTCCGATTGTTTCATTAGCAGTT
ATAGCTGCTGTATTCATGTGTGTTGTTTATTATGCTTCTGGATATGCTTC
TGAAAACACTAAATTAATAGAAAAATATGGAATTGCTAGGACAAAAATTT
TGAGCCTTTCCAGAATGGTTGAGAAAATGAGCTCAAATCAAAAGATATGT
CAAAGCAACCTTGGTCAAAATGAGCAATCAAATAAAGAGCTTACTCTGCA
AGTTAGCCGTTGCAAATCGGCAAAAGAAGAAGAAGAAACAAAGAGTAAAC
AATGTCAAAGCCAGATAACTACCTTCCAGCGATTCTATTCTGCAGTGAAG
GTTAGTTTTTATCTTTGTATATATCCAGACGATCTCAATCGAACCAGTCG
AACCAAATCGAACGCAATCGACCGATTGAAATTCTATTGTCAAACGCGTT
CGAATCTCAATCGAAAATTACCACAATTTTCAGATTCGATTGCTGATATT
CGATTGCATTCGATTGCTGATATTCGATTGCATTCGATTGATGTTCGATT
GCATTCGATTGATGTTCGATTGCATTCTATTAGGATCCGACCCTTAGAGA
GACTAATCTTTGTTAAAAAGCTGACCCTTTTCGAAATCCTCTCGTTGATT
CGATTCTTTTGAGCTATATATATGAGAGTTAATTAAGGAATAATGGGAAG
CGGTGCGCGTCACGCAAAATATATTTGGGACATGCCTTGTTTCACCCGAA
CAATTGAATGCAGTCGAATGACAATCAAACCAGTCGAATAACAATCGAAC
CAAGTGAATATTACTCAGAATTTTGACAATCGAATTTCAATCGGTCGATT
GCGTTCGATTTGGTTCGACTGGTTCCATCGTCGATTCCGTTCGATTCCGT
TCGATTGAGATCGTCTGGATATAATATTGTGAATTTTAAGAGCGAACTAT
ATTCAAAATAGACACTTTGAAAATATCATGATGGCCATCCAAAGAAGGAT
CTTGAATCAATTAAGGGGACTACCGTCAACTGCTCTAACTTTGAACTATC
TGACAAAACATGGGACAGCATGATGCAATTCGGCCACCATCAGTCACGGG
GTGTGCATTTGCAACGGTTTCAACGATTTTTTCCAACATTGTGCACATAA
GCTAGAACGTGTAAGGCAAAATGCGCTAAAATTAACAAATCTCAACTTTA
AAATGAAAATTGGCATAAAACGAAGACGAATGGCATTTTCATTTTCTCTT
TAGAAGATTCTTTAGCCTTTTTAGAAAGTGTTTGTCTGCGGGTTAAAACT
TTGATCTGTGCATTTTTTTATAATCAAGTGTAACATTTTTCCACTCTGTG
TAGATGCAACGGGTTGCAGTGATCGAGTGTATTTGCACAGGGTTTTTTCG
TCACTTTGGTTTTCGACCCGTTGCATTTGCCGCATGTCGAACCCTGTGCA
AATGCAAGGATTTCCGTGACTGACCATTTCACAGAACCTCCAAAGTCATT
TGATTTGAGTTAATGAACGGCGTTTTAAAAAATACACGATTTCTCTTTCG
CACCGAGTAAATTTTAGCAAGACAGTAATTATTTTAATCTTGGGGAGGAC
TGATTTTGGCCAATTCGTTAAAACATTTAAGATTTTAAAAAATAGGTGAA
AATGAAAATGTCCAAGGAGGGCATTATGTCACTCTCCTTTGACTCCTGGG
ATAATATCAAGAAGGTCGTTTCTTTTTCATTTATTTGCATAAGTCTAAAA
GAGTTAACTTCACAAATAGAATCACTGATCATTACTTCACAGTCATGGAG
GAACTTTTTTTTTCAGAATCTCTGTGAATGACATGATAAGGGGGTTGCTG
ACATAAGAGCAATTTACAGTATAGTTTTTGAACAAAATAAGAAGTATTTT
CCCTGAAAATCACTCACATTGGCACTGTGGTATAATAGTGGTCTTGACTT
AGGTCACTGCACAGGCGACTGATTCGATTCCCACTTGCAGTAGATCACTT
GGCAAGTGAATGAACTTTTGAACTTTTGCCCGGGTCAACCCGTACCATGT
GAGGGGAATTGGGTAGTCAGTCCTAGGTGCTGACGGGACGCTCATAGAAA
GCAGCTATAGTGGCGAAAATAGGCTTCAAAGCCTCCTGCAACTCAACCAT
ATAGAAATAGAAATTGTGGCCGAGTTAGAAGGAGGCTGTGAAAAAGACCT
GATTTTTTTGGACCTACCCCGGTGGGGTGGAAGTCCTATAATTTAACCTT
TGTCTGTTCGTTCGTCCGTTCGTTATTAGCTTTCCTAGTGATTGGCTCGT
TAGTTTTTTCTGATTTTTTGCACAAAGATGTGTAACGATAAACCCTCGAA
TATTACTAAGCCTGATTTTCGAAAAAAATTGTTGGGCAAATTTGGGTCAA
AAAACGGCTAAAAAACAGATCATTAACTTTTTCTGATTTTTTGCACAAAG
ATGTGTAGCGATAAACCCTCGAATATTACTAAGCCTGATTTTCGAAAACA
ATTGTTGGGCAAATTTGGGTCAAAAAACGGCTAAAAAACAGAACATTAAC
TTTTTCTGATTTTTTGCATGAAAGTAGGGTACCATCATGGTAAAAGATCG
CTCAAGCAGATTTTTTCAAAAAAGTTTTGTTGGCTCAAAAAACGCATGTT
TATCTATAAGAATCACTATTAATAGGCATTCATCAATGTTCTTAGCCAAA
TTACTCAATTTTTTGATGAGATAGATATTTTTTTTGCTCACAAAGTCTTA
AAATATGAAAGAATATTTCAAGAGCATGAAATTTTTGNAACGTTTTTTTT
ATAAGAAACAAACGACTAATTTTAATAGATCGTCACTATTTGTGTTCTGA
ATGATTGTTTAATGGTCACGCTCACGTAGATATCAATTACATAAAAATTA
AGAAACGTTGTATTTCTTTTCAATATAATCAACTGATGAATGCGTAAGCA
AGAAACTTTAAGTATTGAAAAGAAATACAACGTTTCTTAATTTTTATGTA
TCAAGCTCTACTTATGTATCGAGCACTCCTAATTGATACCTACTTCTTGT
GTTTCTCTGCACAATTAAGAGTGCTCGATACATAAGTAGATATGTGTTAA
ATGCATAACCTGTTAGGTCCATAAAAGTATCACTTGTTAATCCTGGATTA
GTTTATTAAATCGATTTCAATCAGTTACGAATTTCAATTTGTTTGACTAT
GGGATGACCTATTGAATGCAATCTGAATAATTAATGACCTCCTTCTGCCA
GGAATTATTCATTCCGACAAAAAGTTTTTCTCTGTAACACAGTATCATTA
TTTTTTTGTTTTTTTAGGAAAAACTAAATCATGGAGAAAATGGGGAAGTA
ACAGCCACAGTTGACACAAAATCAGATTTGGATAACACTATAGATGGTAT
CGTTAAATTAAACGGTAAAATGTCTTGCATGATATCTATTATATTAACTG
ATTGAAATTGATTTTTTATGATTCTCGGGGGTAGGTTATATACCAGGATT
GTCAGATGACGGGTATGGCCAAAAAAGTTAGAAAATCGATCCTTACTTAG
AGAGACTGAATTTGAAAATGTTGTCTATCTTTGACTTTTTTGTCACCCTT
AGAGAGACATTTCCCCGAAATTCCAGCCAATGTTTTTAAATTTTAGTCCA
AATTCAAGAATTTATTCAATTGAGTCAATTTTTTATTTTCGTAAATTTGG
AACCCTCAATTTGCTTTTTTATGGTTTTTTGCCTCGAGGGACTTTTGAGG
GTGTGAAAAAGGGACCCTTGGCTCACACATACCTCCATCCCAATCAGTAA
ATATTTTTCAGAAAATAGTACTTTACTTATAAATATTGTTTTAATGTTTC
TAAAGTCTTATTGCATATTTAACTTAAAGTATTCATAATTATAGCCAAAA
TCTCTAAACTTGAGGAAGATCAATCAAAATGTTCTGAAGTTGAGAAGGAG
TTTGAGGAATTGAAACGATCTACTGAAACAACAAATTCTCAGATCAAAGC
ACTTGCGACAGAAAAGTAAGCTGATGTTTTTATTTTTAGTAAATTTTGGT
GAAAAGAAACGTGCATTGTGAAGAATTGTTGAAAACAAGCATCTTTACTA
CTTTAATTGTAGAAATTTTAGCGAGACTAATTTTAGCGTATATTAGCGAG
CCAGAAAAATCTTGATTTTTTTTGTATTTATTTTAGCGAATCATGATTTC
AAAAAATTTCGCGTGGATAAACTTTAGCGAATACTCGTATTACATTATTG
ACCAAATTAGTTTTCTAGCATTTCTTTGCACTGAAACCCTTCCTATTGAT
AAAAATGTATCAAAGCAATATAACCAGAAATTTCGCATGGATAAATTTTA
GCGATCTGTCGTTTCGGTGTGTTTTAGCGAGATTTATTTTAGCGAAAATA
TGGAAAACTCGCTAAAACGCTAAAATTAGTCTCGCTAAAATTTCTACGAT
TAAAGTATTCAACTAAGTTGCTGAAAGGGAAAATTGCATAGTAAAGTATC
TATTTTAAAATTGATTCCAAATTAACTATTTATTTATAATTACCTACATT
TATCATAGGGAAGCACTAAATGACGAATTGAAAAATGTTCGAAAATTGTT
GGAAGAAGCTAATGCAAAAATTTCAAATTTCGACGACCGTGAGTTCTTCT
AAATCATTTTTTAATTTTTTATTCAGATTAAACTGTCTTCAAGCCATGAA
ACTACATGGAATGAACGATCAGGATTTAATATTGATTGTCTAGTTTAAGA
CCATGTTCAGATGTAACGGAATCGTATATGGTTTCCGTATTTCCGGTATG
GTTTCCGTTACGGATCGAGAGTGTTCATATTGGTTTCAGAACGTTTCGGA
GCAAGAAAACGGAGCAATTCCATTCCGATGAAAAAAGTGGAGCAAAACCG
TTTTTTATCCGTTTTGCTTTGTTTCTTCATTGACGTTTCCGATTTTGACG
TTCACATTGTTTCGAAACTGTTTTGTTCTAGAACTATATGGAACCGTAAC
GCCTGAATATGATCTTAGAAGGCTTACTTTGTAATGATTTATTCGTGAGC
TCAACGTTTGCTTGAAGTGGCTCCTCTCAAGTGGAATATAGCGTTCCCAA
TGTCTTCCATTATTATATTCTTCCATGCAATANGACTCCTCTCAAGTGGA
ATATAGCGTTCCCAATGTCTTCCATTATTATTTTCTTCCATGCAATTTAA
AGTATAGAATGATAATATATTATTATTCTCTATTTTCAGATCAACATAAA
AGAAGTTTTCAAAGGAAGAAAATTCCTGAACAGGATAGAAATGTAAAAGA
GGAGATTCTCAATGAAAAGAAAGNATTCCTGAACAGGATAGAAATGTAAA
AGAGGAGATTCTTAATGAAAAGAAAGAACAACCTAAGCCTGTCAACCATG
AATCTGGGGTTGTAGATAGCTTAAACAAAGCCTCGTCTGTTTCTGGTAAT
AATAGTGCTAGTAGTGTAGTTCACAAAGCTATCAACGTCACTTCGAGTGA
TGCAAGAAATACAACACCCACAGAAGCTGATAGCGAACAAACCACAACCA
ATACATCAACCTCTTTTACCAAGACTAATACCTCAACCGCGTCGCCAGAG
TTATCAACAACCACCAAGAAGGCTCTGGTCACAGAAGAAGACGACGATTT
GGAAGGTGGATTCAATGATACAGCAGGTGAGAAAAATTCGAAAACAACAA
TTGCCCCGAGTAAACAAACCATAAAAAGCACACTTAATCTTAATCGTACT
CTAAGCACGTCTTTTAACAACTCCGATAATAAAATGACCGTGAAAGCCAA
TGCAAGTGTAAGCAGTAGTATTCGTGGGGAAACTGTTGGAAATTCAACTG
AAAAGANCGATAATAAAATGACCGTGAAAGCCAATGCAAGTGTAAGCAGT
AGTATTCGTGGGGAAACTGTTGGAAATTCGACTGAAAAGAAAACCCATAG
TGTTATTGATGCCAATGTACGACCTGATATCTTGAGTAGGGAAAGCGAAA
ATAAAGAAAATAACGAAAAAGTTATTGAGAAGAAAGGCGATGATAACTTT
ATTGATTTCAACGAACGACCTGATATCACAAATAAAGAAAAGGAGAAGAA
AAATTCTTTGAACGTAGAAAAAATTACAGACGTGGATTTGGATGAACTTG
ACCAAGCTTGATGGAATTCAAACTCCAATGAACTCCTCTTATAATATTTT
CCTCAGTCTTTAACATTATCAACCAATATATATTCATACTAATTTTGGGA
GGATTTGCTTTGGAGTAGAATTGTTTTGTAACGGTTTTTGTTTAAAACTT
TTTCTCGGTCGAAATTTGCAAATTTTAGAGTAGTATTTTTTCTTTTAAAA
TCCACGTCTTGCTAAGCATGAATTATAGAATTAAATCTTCACTTTAAAAA
TTTTTTGAAGTCTAAAGGTCACACCTATTAGGTATATTTCGTTTTTTTTG
TATTTATTGATATATTATTTATTTGTTGGTGCATATACTTCNATTTTGTG
TTTTGTATTTATAGATATATTATTTATTTGTTGGTGCATATAAGGCTTTT
TGTTGTATTCATTTCCATAGCTGTTTTTTATGAGTTATTGTATAATGGCT
GTATAATAGATAGTTTTTGGTTTTTTAGTTTTTGTAATTCTTGTATTTAG
TTCATAGCTGCACTAGATTTTTTTTCTCAGAAGATTTTTGGTTGGCCTAA
AAGGCCAAATGTCCACATTTTTTTATTCGTCTACCTATCACACCATTCAC
ACTATCACACTTCTTTAAAGTCCGCACTTTTTTCTTTACGTCCCTACTTA
TTTTAAAAACAGTTATATTTTTACAAGATCTAACTTCCCCTTAACCTCTC
CCTGAAGTCATTGCTCTGTAAGATAACCCGAGAGATAGTTTGTTGTACCC
AACACCGGTCTATTGAGAATCATCTAAACAACTCTCTTTATATTTTAGAT
GAACAAAGCAATAAAGAAGATTTTGATGCAGAACCGAAAAATAATCCGGA
GTTCGTACCTGCAAACATGAAGTAATTACGACTGACATTAAATACACTTT
TTCTTTGAATGGTTAGATAGAATGTTTTGTGTGAATTGTCCTTGTCATAC
ATACACGTTTTTTTTCATAGGAACATCCAACATTTTTGAAGCCTTAGGAT
GTTGTTAAATCTTTTAGTTTCAAGCCTGAAATGTTCTTAAACATGTTCTT
ATTTTGACCGTTTTTTGAGCATTTTAGTCAATTTTCCTAAGAAAAAGGAT
GTTTTTGAGTGCGCAAAGCCTTAAAAATGTTCTTAACTTGTTCTTTACAT
TTTGGCCATCGAAGCCTTATGTTCTTATATAGGTTGTTCTTATATAAAAA
AACGTGTACACATACTTGTGCTAGTTTCGTGATAAGAGAACCGTGACGGA
TATTTCGCATCTATAAAATGACCGATGAAATTCGGACTATTTGGAATGAT
GGGTGTGAAAACTCTTGTAATTTCTATGTAGGTTGTTTTGCGTTTCTTTT
CTTACCGTAAAGTCAGTTTCTAGTAGTTTTATGTCCATTTCTATCAGTAA
ACAAATAATTTTATCGAATTTGTTTTTGAATGTTGATGATTTCAGCCGCT
TTCTCAGATACATTCTTTTTATATTTTTTTAATNTTGATGATTTCAGCCG
CTTTTTCAGATACATTCTTTTTATATTTTTTTAATGTACAATTTTTTAAA
GATCTTTCAATATTTAATTAAATGAAGAAATATATTTGATAAAGAGG

Coding sequence (CDS) from alignment at scaffold_477:263127..271723-

>TCONS_00067900 ID=TCONS_00067900|Name=TCONS_00067900|organism=Clytia hemisphaerica|type=CDS|length=3930bp|location=Sequence derived from alignment at scaffold_477:263127..271723- (Clytia hemisphaerica)
ATCAACATAAAAGAAGTTTTCAAAGGAAGAAAATTCCTGAACAGGATAGA
AATGTAAAAGAGGAGATTCTCAATGAAAAGAAAGNATTCCTGAACAGGAT
AGAAATGTAAGGAAGCACTAAATGACGAATTGAAAAATGTTCGAAAATTG
TTGGAAGAAGCTAATGCAAAAATTTCAAATTTCGACGACCCCAAAATCTC
TAAACTTGAGGAAGATCAATCAAAATGTTCTGAAGTTGAGAAGGAGTTTG
AGGAATTGAAACGATCTACTGAAACAACAAATTCTCAGATCAAAGCACTT
GCGACAGAAAAGAAAAACTAAATCATGGAGAAAATGGGGAAGTAACAGCC
ACAGTTGACACAAAATCAGATTTGGATAACACTATAGATGGTATCGTTAA
ATTAAACGATGGCAATGGATTTAAGCAGAAAAGGAGCGAGCGGTGAAAGG
AAAATGTTGGGTATTCCGATTGTTTCATTAGCAGTTATAGCTGCTGTATT
CATGTGTGTTGTTTATTATGCTTCTGGATATGCTTCTGAAAACACTAAAT
TAATAGAAAAATATGGAATTGCTAGGACAAAAATTTTGAGCCTTTCCAGA
ATGGTTGAGAAAATGAGCTCAAATCAAAAGATATGTCAAAGCAACCTTGG
TCAAAATGAGCAATCAAATAAAGAGCTTACTCTGCAAGTTAGCCGTTGCA
AATCGGCAAAAGAAGAAGAAGAAACAAAGAGTAAACAATGTCAAAGCCAG
ATAACTACCTTCCAGCGATTCTATTCTGCAGTGAAGATCAACATAAAAGA
AGTTTTCAAAGGAAGAAAATTCCTGAACAGGATAGAAATGTAAAAGAGGA
GATTCTCAATGAAAAGAAAGNATTCCTGAACAGGATAGAAATGTAAGGAA
GCACTAAATGACGAATTGAAAAATGTTCGAAAATTGTTGGAAGAAGCTAA
TGCAAAAATTTCAAATTTCGACGACCCCAAAATCTCTAAACTTGAGGAAG
ATCAATCAAAATGTTCTGAAGTTGAGAAGGAGTTTGAGGAATTGAAACGA
TCTACTGAAACAACAAATTCTCAGATCAAAGCACTTGCGACAGAAAAGAA
AAACTAAATCATGGAGAAAATGGGGAAGTAACAGCCACAGTTGACACAAA
ATCAGATTTGGATAACACTATAGATGGTATCGTTAAATTAAACGATGGCA
ATGGATTTAAGCAGAAAAGGAGCGAGCGGTGAAAGGAAAATGTTGGGTAT
TCCGATTGTTTCATTAGCAGTTATAGCTGCTGTATTCATGTGTGTTGTTT
ATTATGCTTCTGGATATGCTTCTGAAAACACTAAATTAATAGAAAAATAT
GGAATTGCTAGGACAAAAATTTTGAGCCTTTCCAGAATGGTTGAGAAAAT
GAGCTCAAATCAAAAGATATGTCAAAGCAACCTTGGTCAAAATGAGCAAT
CAAATAAAGAGCTTACTCTGCAAGTTAGCCGTTGCAAATCGGCAAAAGAA
GAAGAAGAAACAAAGAGTAAACAATGTCAAAGCCAGATAACTACCTTCCA
GCGATTCTATTCTGCAGTGAAGATCAACATAAAAGAAGTTTTCAAAGGAA
GAAAATTCCTGAACAGGATAGAAATGTAAAAGAGGAGATTCTCAATGAAA
AGAAAGNATTCCTGAACAGGATAGAAATGTAAGGAAGCACTAAATGACGA
ATTGAAAAATGTTCGAAAATTGTTGGAAGAAGCTAATGCAAAAATTTCAA
ATTTCGACGACCCCAAAATCTCTAAACTTGAGGAAGATCAATCAAAATGT
TCTGAAGTTGAGAAGGAGTTTGAGGAATTGAAACGATCTACTGAAACAAC
AAATTCTCAGATCAAAGCACTTGCGACAGAAAAGAAAAACTAAATCATGG
AGAAAATGGGGAAGTAACAGCCACAGTTGACACAAAATCAGATTTGGATA
ACACTATAGATGGTATCGTTAAATTAAACGATGGCAATGGATTTAAGCAG
AAAAGGAGCGAGCGGTGAAAGGAAAATGTTGGGTATTCCGATTGTTTCAT
TAGCAGTTATAGCTGCTGTATTCATGTGTGTTGTTTATTATGCTTCTGGA
TATGCTTCTGAAAACACTAAATTAATAGAAAAATATGGAATTGCTAGGAC
AAAAATTTTGAGCCTTTCCAGAATGGTTGAGAAAATGAGCTCAAATCAAA
AGATATGTCAAAGCAACCTTGGTCAAAATGAGCAATCAAATAAAGAGCTT
ACTCTGCAAGTTAGCCGTTGCAAATCGGCAAAAGAAGAAGAAGAAACAAA
GAGTAAACAATGTCAAAGCCAGATAACTACCTTCCAGCGATTCTATTCTG
CAGTGAAGATCAACATAAAAGAAGTTTTCAAAGGAAGAAAATTCCTGAAC
AGGATAGAAATGTAAAAGAGGAGATTCTCAATGAAAAGAAAGNATTCCTG
AACAGGATAGAAATGTAAGGAAGCACTAAATGACGAATTGAAAAATGTTC
GAAAATTGTTGGAAGAAGCTAATGCAAAAATTTCAAATTTCGACGACCCC
AAAATCTCTAAACTTGAGGAAGATCAATCAAAATGTTCTGAAGTTGAGAA
GGAGTTTGAGGAATTGAAACGATCTACTGAAACAACAAATTCTCAGATCA
AAGCACTTGCGACAGAAAAGAAAAACTAAATCATGGAGAAAATGGGGAAG
TAACAGCCACAGTTGACACAAAATCAGATTTGGATAACACTATAGATGGT
ATCGTTAAATTAAACGATGGCAATGGATTTAAGCAGAAAAGGAGCGAGCG
GTGAAAGGAAAATGTTGGGTATTCCGATTGTTTCATTAGCAGTTATAGCT
GCTGTATTCATGTGTGTTGTTTATTATGCTTCTGGATATGCTTCTGAAAA
CACTAAATTAATAGAAAAATATGGAATTGCTAGGACAAAAATTTTGAGCC
TTTCCAGAATGGTTGAGAAAATGAGCTCAAATCAAAAGATATGTCAAAGC
AACCTTGGTCAAAATGAGCAATCAAATAAAGAGCTTACTCTGCAAGTTAG
CCGTTGCAAATCGGCAAAAGAAGAAGAAGAAACAAAGAGTAAACAATGTC
AAAGCCAGATAACTACCTTCCAGCGATTCTATTCTGCAGTGAAGATCAAC
ATAAAAGAAGTTTTCAAAGGAAGAAAATTCCTGAACAGGATAGAAATGTA
AAAGAGGAGATTCTCAATGAAAAGAAAGNATTCCTGAACAGGATAGAAAT
GTAAGGAAGCACTAAATGACGAATTGAAAAATGTTCGAAAATTGTTGGAA
GAAGCTAATGCAAAAATTTCAAATTTCGACGACCCCAAAATCTCTAAACT
TGAGGAAGATCAATCAAAATGTTCTGAAGTTGAGAAGGAGTTTGAGGAAT
TGAAACGATCTACTGAAACAACAAATTCTCAGATCAAAGCACTTGCGACA
GAAAAGAAAAACTAAATCATGGAGAAAATGGGGAAGTAACAGCCACAGTT
GACACAAAATCAGATTTGGATAACACTATAGATGGTATCGTTAAATTAAA
CGATGGCAATGGATTTAAGCAGAAAAGGAGCGAGCGGTGAAAGGAAAATG
TTGGGTATTCCGATTGTTTCATTAGCAGTTATAGCTGCTGTATTCATGTG
TGTTGTTTATTATGCTTCTGGATATGCTTCTGAAAACACTAAATTAATAG
AAAAATATGGAATTGCTAGGACAAAAATTTTGAGCCTTTCCAGAATGGTT
GAGAAAATGAGCTCAAATCAAAAGATATGTCAAAGCAACCTTGGTCAAAA
TGAGCAATCAAATAAAGAGCTTACTCTGCAAGTTAGCCGTTGCAAATCGG
CAAAAGAAGAAGAAGAAACAAAGAGTAAACAATGTCAAAGCCAGATAACT
ACCTTCCAGCGATTCTATTCTGCAGTGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042408XLOC_042408Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067900-exon-scaffold_477-1575043694:271144..271723TCONS_00067900-exon-scaffold_477-1575043694:271144..271723Clytia hemisphaericaexon
TCONS_00067900-exon-scaffold_477-1575043694:267460..267556TCONS_00067900-exon-scaffold_477-1575043694:267460..267556Clytia hemisphaericaexon
TCONS_00067900-exon-scaffold_477-1575043694:266859..266979TCONS_00067900-exon-scaffold_477-1575043694:266859..266979Clytia hemisphaericaexon
TCONS_00067900-exon-scaffold_477-1575043694:266236..266315TCONS_00067900-exon-scaffold_477-1575043694:266236..266315Clytia hemisphaericaexon
TCONS_00067900-exon-scaffold_477-1575043694:265198..265634TCONS_00067900-exon-scaffold_477-1575043694:265198..265634Clytia hemisphaericaexon
TCONS_00067900-exon-scaffold_477-1575043694:263127..263925TCONS_00067900-exon-scaffold_477-1575043694:263127..263925Clytia hemisphaericaexon
TCONS_00067900-exon-scaffold_477-1510915933:271144..271723TCONS_00067900-exon-scaffold_477-1510915933:271144..271723Clytia hemisphaericaexon
TCONS_00067900-exon-scaffold_477-1510915933:267460..267556TCONS_00067900-exon-scaffold_477-1510915933:267460..267556Clytia hemisphaericaexon
TCONS_00067900-exon-scaffold_477-1510915933:266859..266979TCONS_00067900-exon-scaffold_477-1510915933:266859..266979Clytia hemisphaericaexon
TCONS_00067900-exon-scaffold_477-1510915933:266236..266315TCONS_00067900-exon-scaffold_477-1510915933:266236..266315Clytia hemisphaericaexon
TCONS_00067900-exon-scaffold_477-1510915933:265198..265634TCONS_00067900-exon-scaffold_477-1510915933:265198..265634Clytia hemisphaericaexon
TCONS_00067900-exon-scaffold_477-1510915933:263127..263925TCONS_00067900-exon-scaffold_477-1510915933:263127..263925Clytia hemisphaericaexon
TCONS_00067900-exon-scaffold_477-1491911889:271144..271723TCONS_00067900-exon-scaffold_477-1491911889:271144..271723Clytia hemisphaericaexon
TCONS_00067900-exon-scaffold_477-1491911889:267460..267556TCONS_00067900-exon-scaffold_477-1491911889:267460..267556Clytia hemisphaericaexon
TCONS_00067900-exon-scaffold_477-1491911889:266859..266979TCONS_00067900-exon-scaffold_477-1491911889:266859..266979Clytia hemisphaericaexon
TCONS_00067900-exon-scaffold_477-1491911889:266236..266315TCONS_00067900-exon-scaffold_477-1491911889:266236..266315Clytia hemisphaericaexon
TCONS_00067900-exon-scaffold_477-1491911889:265198..265634TCONS_00067900-exon-scaffold_477-1491911889:265198..265634Clytia hemisphaericaexon
TCONS_00067900-exon-scaffold_477-1491911889:263127..263925TCONS_00067900-exon-scaffold_477-1491911889:263127..263925Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067900-proteinTCONS_00067900-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_477supercontigscaffold_477:263127..271723 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.7551	15.0538	7.33272	7.3321	10.4796	7.78506	13.3963	14.5915	9.91042	9.33779	5.75894	7.049	5.34475	7.01545	3.67292	2.38885	9.27005	11.3039	3.54216	3.92466	8.33858	9.15135	12.4245	11.9324	10.8021	10.9259	6.6408	4.60234	4.78622	4.8764
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067900 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top