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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067892 ID=TCONS_00067892|Name=TCONS_00067892|organism=Clytia hemisphaerica|type=transcript|length=1061bp
TCTGATTCGTCGCTGGTTTCCATAtccaaaatatccaaaatatcTTCAAA
GCCTGGACTGGAGTTTTGAGAAGAGATATTATCCTTGTATTGGATAATTT
GTTGGGAAGAATAGTTTGAATTTTCAGTATTAGTCGAGTTCTGCATATCG
GTATTATCAATCTGGTGGCTCGtttgatgggaaaaatagtTTAAATTTTC
AGTATTAGTCGAGTTCTGCATATTAGGATTATCAATCGGGTGGCTCGTTT
GTTGGGAAAAATAGTTTAAATTTTCAGTATTAGTCGAGTTCTGCATATCG
GTATTATCAATCTGATGGCTCGTTTGTTGGGAAGAATAGTTTAAATTTTC
AGTATTAGTCGAGTTCTGCATATTGGGATTATCAATCTGATGGCTCGTTT
GATGGGAAAAACAGTTTAAATTTTCAGTATTAGTCGAGTTCTGCATATCG
GGATTATTAATATTGTTGAATGAGTTTTGTTGTGTGTTTGATTGGTGATT
TACATTACCACTGATGCCAAATGTTTGTGCAATGAATTGTGGGTCGGTGA
ATTGCGGGTCTAATGAGTTTATTTGGTTGTATTCATTACTAGTGCCGTAA
TTATCTTGTTGCATATTTGACTGTATAGTGTAGtcttgttgttgctgttg
ttgttgttgctctTGTTGGTTGGAAAATACATTTCTATTAGAGTCAAATT
CATGTATGCAATTCTGATATCCGTTATCCAGTGATGCGTTTGTAAAAGGT
TGATCATTTCCAATTTCATAGTTCTGTCTATTCGTCTGTATGAAACCATT
TTGGTGTTGCTGTGTAGATTGATATTGTTCTGTTTCAAAGTCACTCACGC
TAGATGGATTCAAGTTATTGGGTCGTACGTTTGCATTAATATTAAATGAG
GGTTCGAACATATGAGAGTTTGTTGGTAGCTGTGCATTTAAATGCCCACC
ATGTGAGTTCTCTGGCATTATTGCTGCTAAGGTCAACACAAGTCAACAAT
ttcatccaattttttttcttctttttttgacttttctgagtagttttttt
tttcatttcct Run BLAST on NCBI transcript from alignment at scaffold_477:101198..102408- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067892 ID=TCONS_00067892|Name=TCONS_00067892|organism=Clytia hemisphaerica|type=transcript|length=1211bp|location=Sequence derived from alignment at scaffold_477:101198..102408- (Clytia hemisphaerica)
TCTGATTCGTCGCTGGTTTCCATATCCAAAATATCCAAAATATCTTCAAA
GCCTGGACTGGAGTTTTGAGAAGAGATATTATCCTTGTATTGGATAATTT
GTTGGGAAGAATAGTTTGAATTTTCAGTATTAGGCAAGTTCTGCATATCG
GGATTATCAATCTGGTGGCTCGTTTGATGGGAAAAATAGTTTAAATTTTC
AGTATTAGTCGAGTTCTGCATATCGGTATTATCAATCTGGTGGCTCGTTT
GTTGGGAATAACAGTTTAAATTTTCAGCATTAGTCGAGTTCTGCATATCG
GTATTATCAATCTGGTGGCTCGTTTGATGGGAAAAATAGTTTAAATTTTC
AGTATTAGTCGAGTTCTGCATATTAGGATTATCAATCGGGTGGCTCGTTT
GTTGGGAAAAATAGTTTAAATTTTCAGTATTAGTCGAGTTCTGCATATCG
GTATTATCAATCTGATGGCTCGTTTGTTGGGAAGAATAGTTTAAATTTTC
AGTATTAGTCGAGTTCTGCATATTGGGATTATCAATCTGATGGCTCGTTT
GATGGGAAAAACAGTTTAAATTTTCAGTATTAGTCGAGTTCTGCATATCG
GGATTATTAATATTGTTGAATGAGTTTTGTTGTGTGTTTGATTGGTGATT
TACATTACCACTGATGCCAAATGTTTGTGCAATGAATTGTGGGTCGGTGA
ATTGCGGGTCTAATGAGTTTATTTGGTTGTATTCATTACTAGTGCCGTAA
TTATCTTGTTGCATATTTGACTGTATAGTGTAGTCTTGTTGTTGCTGTTG
TTGTTGTTGCTCTTGTTGGTTGGAAAATACATTTCTATTAGAGTCAAATT
CATGTATGCAATTCTGATATCCGTTATCCAGTGATGCGTTTGTAAAAGGT
TGATCATTTCCAATTTCATAGTTCTGTCTATTCGTCTGTATGAAACCATT
TTGGTGTTGCTGTGTAGATTGATATTGTTCTGTTTCAAAGTCACTCACGC
TAGATGGATTCAAGTTATTGGGTCGTACGTTTGCATTAATATTAAATGAG
GGTTCGAACATATGAGAGTTTGTTGGTAGCTGTGCATTTAAATGCCCACC
ATGTGAGTTCTCTGGCATTATTGCTGCTAAGGTCAACACAAGTCAACAAT
TTCATCCAATTTTTTTTCTTCTTTTTTTGACTTTTCTGAGTAGTTTTTTT
TTTCATTTCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067892-exon-scaffold_477-1575043694:102276..102408 | TCONS_00067892-exon-scaffold_477-1575043694:102276..102408 | Clytia hemisphaerica | exon |
| TCONS_00067892-exon-scaffold_477-1575043694:101198..102125 | TCONS_00067892-exon-scaffold_477-1575043694:101198..102125 | Clytia hemisphaerica | exon |
| TCONS_00067892-exon-scaffold_477-1510915933:102276..102408 | TCONS_00067892-exon-scaffold_477-1510915933:102276..102408 | Clytia hemisphaerica | exon |
| TCONS_00067892-exon-scaffold_477-1510915933:101198..102125 | TCONS_00067892-exon-scaffold_477-1510915933:101198..102125 | Clytia hemisphaerica | exon |
| TCONS_00067892-exon-scaffold_477-1491911889:102276..102408 | TCONS_00067892-exon-scaffold_477-1491911889:102276..102408 | Clytia hemisphaerica | exon |
| TCONS_00067892-exon-scaffold_477-1491911889:101198..102125 | TCONS_00067892-exon-scaffold_477-1491911889:101198..102125 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_477 | supercontig | scaffold_477:101198..102408 - |
Blast
The following BLAST results are available for this feature:
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