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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067891 ID=TCONS_00067891|Name=TCONS_00067891|organism=Clytia hemisphaerica|type=transcript|length=834bp
TGATTCGTCGCTGGTTTCCATAtccaaaatatccaaaatatcTTCAAAGC
CTGGACTGGAGTTTTGAGAAGAGATATTATCCTTGTATTGGATAATTTGT
TGGGAAGAATAGTTTGAATTTTCAGTATTAGTCGAGTTCTGCATATTGGG
ATTATCAATCTGATGGCTCGTTTGATGGGAAAAACAGTTTAAATTTTCAG
TATTAGTCGAGTTCTGCATATCGGGATTATTAATATTGTTGAATGAGTTT
TGTTGTGTGTTTGATTGGTGATTTACATTACCACTGATGCCAAATGTTTG
TGCAATGAATTGTGGGTCGGTGAATTGCGGGTCTAATGAGTTTATTTGGT
TGTATTCATTACTAGTGCCGTAATTATCTTGTTGCATATTTGACTGTATA
GTGTAGtcttgttgttgctgttgttgttgttgctctTGTTGGTTGGAAAA
TACATTTCTATTAGAGTCAAATTCATGTATGCAATTCTGATATCCGTTAT
CCAGTGATGCGTTTGTAAAAGGTTGATCATTTCCAATTTCATAGTTCTGT
CTATTCGTCTGTATGAAACCATTTTGGTGTTGCTGTGTAGATTGATATTG
TTCTGTTTCAAAGTCACTCACGCTAGATGGATTCAAGTTATTGGGTCGTA
CGTTTGCATTAATATTAAATGAGGGTTCGAACATATGAGAGTTTGTTGGT
AGCTGTGCATTTAAATGCCCACCATGTGAGTTCTCTGGCATTATTGCTGC
TAAGGTCAACACAAGTCAACAATttcatccaattttttttcttctttttt
tgacttttctgagtagttttttttttcatttcct Run BLAST on NCBI transcript from alignment at scaffold_477:101198..102406- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067891 ID=TCONS_00067891|Name=TCONS_00067891|organism=Clytia hemisphaerica|type=transcript|length=1209bp|location=Sequence derived from alignment at scaffold_477:101198..102406- (Clytia hemisphaerica)
TGATTCGTCGCTGGTTTCCATATCCAAAATATCCAAAATATCTTCAAAGC
CTGGACTGGAGTTTTGAGAAGAGATATTATCCTTGTATTGGATAATTTGT
TGGGAAGAATAGTTTGAATTTTCAGTATTAGGCAAGTTCTGCATATCGGG
ATTATCAATCTGGTGGCTCGTTTGATGGGAAAAATAGTTTAAATTTTCAG
TATTAGTCGAGTTCTGCATATCGGTATTATCAATCTGGTGGCTCGTTTGT
TGGGAATAACAGTTTAAATTTTCAGCATTAGTCGAGTTCTGCATATCGGT
ATTATCAATCTGGTGGCTCGTTTGATGGGAAAAATAGTTTAAATTTTCAG
TATTAGTCGAGTTCTGCATATTAGGATTATCAATCGGGTGGCTCGTTTGT
TGGGAAAAATAGTTTAAATTTTCAGTATTAGTCGAGTTCTGCATATCGGT
ATTATCAATCTGATGGCTCGTTTGTTGGGAAGAATAGTTTAAATTTTCAG
TATTAGTCGAGTTCTGCATATTGGGATTATCAATCTGATGGCTCGTTTGA
TGGGAAAAACAGTTTAAATTTTCAGTATTAGTCGAGTTCTGCATATCGGG
ATTATTAATATTGTTGAATGAGTTTTGTTGTGTGTTTGATTGGTGATTTA
CATTACCACTGATGCCAAATGTTTGTGCAATGAATTGTGGGTCGGTGAAT
TGCGGGTCTAATGAGTTTATTTGGTTGTATTCATTACTAGTGCCGTAATT
ATCTTGTTGCATATTTGACTGTATAGTGTAGTCTTGTTGTTGCTGTTGTT
GTTGTTGCTCTTGTTGGTTGGAAAATACATTTCTATTAGAGTCAAATTCA
TGTATGCAATTCTGATATCCGTTATCCAGTGATGCGTTTGTAAAAGGTTG
ATCATTTCCAATTTCATAGTTCTGTCTATTCGTCTGTATGAAACCATTTT
GGTGTTGCTGTGTAGATTGATATTGTTCTGTTTCAAAGTCACTCACGCTA
GATGGATTCAAGTTATTGGGTCGTACGTTTGCATTAATATTAAATGAGGG
TTCGAACATATGAGAGTTTGTTGGTAGCTGTGCATTTAAATGCCCACCAT
GTGAGTTCTCTGGCATTATTGCTGCTAAGGTCAACACAAGTCAACAATTT
CATCCAATTTTTTTTCTTCTTTTTTTGACTTTTCTGAGTAGTTTTTTTTT
TCATTTCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067891-exon-scaffold_477-1575043694:102276..102406 | TCONS_00067891-exon-scaffold_477-1575043694:102276..102406 | Clytia hemisphaerica | exon |
| TCONS_00067891-exon-scaffold_477-1575043694:101198..101900 | TCONS_00067891-exon-scaffold_477-1575043694:101198..101900 | Clytia hemisphaerica | exon |
| TCONS_00067891-exon-scaffold_477-1510915933:102276..102406 | TCONS_00067891-exon-scaffold_477-1510915933:102276..102406 | Clytia hemisphaerica | exon |
| TCONS_00067891-exon-scaffold_477-1510915933:101198..101900 | TCONS_00067891-exon-scaffold_477-1510915933:101198..101900 | Clytia hemisphaerica | exon |
| TCONS_00067891-exon-scaffold_477-1491911889:102276..102406 | TCONS_00067891-exon-scaffold_477-1491911889:102276..102406 | Clytia hemisphaerica | exon |
| TCONS_00067891-exon-scaffold_477-1491911889:101198..101900 | TCONS_00067891-exon-scaffold_477-1491911889:101198..101900 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_477 | supercontig | scaffold_477:101198..102406 - |
Blast
The following BLAST results are available for this feature:
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