TCONS_00067881 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067881
Unique NameTCONS_00067881
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2944

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067881 ID=TCONS_00067881|Name=TCONS_00067881|organism=Clytia hemisphaerica|type=transcript|length=2944bp
TTTTATAGACtataattaaagaaaaaatgtctTTAGTGGCTGCTTatagc
gaaagtgaaagtgaaaacgAGAGTGACCAAGAACAAGAGAATCCAAACGA
AGTAAAAGTTGAAACTGCAAAAACAACTTTAAATGTCCACCAAGCTGATG
AAAAGCCACCGGTTGAAGAAGAAAGAACTggttttgaaattgaagatgag
GATGATTGGCAAACAGGTGATAGTGTAAACACAGCCCAAACCACAAATTT
GGGAGGAGAATCTTCTGCTgagtttttttctaaacttcCTGAGCCAGCAG
CTATTGAAAGTAAATCAACCGCTCCTATAAAGattgaagaagaagaagat
gaattTTTGAAGAAGAAACCATCCCTGGAagacaaattattcaaaaaaga
gCAAGCCCTATTGGAGAAAGAACTCAACGAGAAGAAGAAGCATGGAGATA
AAGAAGACTCTAAACATTTCTTGAGCAAATTCACTAAAGGTAGTGGCGGC
GGTGGtggaaagaaatcaaagaatcAGAAAGTATTGATTTCCATACCAAC
GCTAGAGGATATTGGAGCTGACAGTGATTCCGATGAAGAAAGCTACCAAC
CCAAACAAGAACCACAGAAATTCATGGCTAGTAAGAAATCTTCAGCATTA
TTCGCCATGCTGCCAAAGCCGAAGAATAGCGTAACAGTCAGTGCTAACAA
GAATCGTGTATTCAATCGTGAAGTGAACAGACCCTTAGTACCACACACTG
TGACCAAACATAAACCTCAAGCAAAAGACACTTCTTCTAAATCGACCAGT
ATTAATGTCAACCCTGAAAGAAGTGTTGCTACAGGAAATTCCAAAGTCAA
AAATGATGTAGATTCGGAAGAGTCTGAAGATGATGACGATGTTTCTGCCA
CAAGCTTTTTCTCTTTCGGCGAGAAAAATACAACCGAAAAGAACACACCT
ATGGAAATGAAACCCGATGAAGAAGTTCACAATAAAAAGGAGAATAATAC
CAAAACAGAGAATATATCAATGGAAATTGTTAATGAAGTGACTTCCGTAA
AACCTAAAGAACGCGAAACAAAAATAGAACCGAAACCCAATAAACCATCC
TCCAATAACAAAGACAATTCATATTTTTCCACATTGTTTAAAAGTAAAAC
GAACTCGCAGACAGCTTCAGTAAAAACCAATAAAGACATTTCAAATGACA
ACGATGTTAGAACTTCATGTACAGATTCGAATACAAAGAGCTCGATACAA
ACTTCTCATGGAATCACAGCACCTTACGGACATAATTCTAGTGATTCTTC
AGTAACTGCTCCATATGGTGGAAATAGCTCTAGTGTAACTGCGCCGTATG
GGTCTAGTAATTCTGCAGTGACGGCGCCCTATGGATCGGGTAATTCTGCA
GTAACAGCGCCCTATGGGTCCGGTAATTCTGCAGTAACGGCGCCCTACGG
GTCACACAATAGCATATCTCAACAACACCAACAGATGCCTCAGAATCATG
GTTACCCAACGAACGCAACTGACAATACCTTCTTTTCATACTCTCATGCA
ACTTCTACTAGCAGCAGTCAGCCAGCACAAGCATCTATGGATTTTTACCA
TCAACCAAATGAAGACACGCCAATTGACCAAGAAGCTATGAGGGCGTTGC
AAGGGCGTAAGCGAAGGAGAGGTGAAGAGATCAACATTATTGATGTCAAC
GCACAAGACCTCCAAGTTGACAAAGATGAATACCTCAAAAATCTCACCGT
CGAGTCTGGATATAAAAACAAAGCTCCTCAAGATGCCGGCATATCTAGTC
AACAAAAACGCAAACATCAAATCACGTATCTGGCTTTTCAGGCAAAAGAG
CGTGAATTTGAATTGCGCCAATCGTGGGCTGATAGCCGAGCGAGTAAGCA
ACAAACACAATCCAAGTATGGTTTCTGAGTTGTGTTGAAGCTACACCCTC
CCTGCCCTGTCTTGGATGTTATTTGCAGTCCCCGAATGTATCAGAAGTTT
TTTGGAATTATTCCTGGATTGAATTGGATACCACGAGATCCCACTCCTCC
TGAAATTTGACTCGAAGCCAAATGACGAGCAAACTATCTGTGAAGGCGTA
CCTACCACAGACCTgaaagggtcggttttttccgATTTGCCAGATTCACC
CATGTTTGCTGTTTTGTGAAGCTTAGCTGTCGACTTTCACAACTCAATGA
ATCAGTCAAGGTCATGATGACAGCAATGAAAACAATACGTTTAATGAACG
ATGAATTTCCAATGTGGAACTATTGAAGAACGAATTCAACCTGATATATA
TTGATGATAACAGCGACTTTAAAGTTTCAATGAGGCCGTTGTATGCTTTC
ATAAATGGTTTTTTGAccagaaaaagaaatttaatgaaGGATACTTAAAA
AATAATAGATTCAACCTGAGAAAGGTTCATGGAAATGGTGTTGTGTAAAA
TCCGGGGGGGCActtgattcaaaaacgaccatacgtgtggcccaaaatta
ggcctttgaaatcgtaCTCTAACAGTACAGGGagaattttgcaaattttg
agcaaattttagcgaaaaatcgacccttacgtgcattttcttgaaagttt
ttttaccattttttcaggcaaaatatggtcagattttcgaatttttactC
CTtgagagtgcaatttttcttatctttgcTGATTatttgacccttacagt
gcactttgggaatgttagaaaatatacccttaagggtcacacgtatggta
ggtcatttaccttgagtgccccccccccctcggggtAAAACGAAACTATG
TTTTGATGATGGTTTTTGACCAAGAAAAGTCaatgaaagatatttaaaaa
aagtttaatgGATGAGTTTTTAGAATATATAAACCTTTTGTTGCTTGTAT
ATAACGCTTTCTTACAAATATCAAGTTCACTGATTATTaacaga
Run BLAST on NCBI

transcript from alignment at scaffold_477:139829..148999+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067881 ID=TCONS_00067881|Name=TCONS_00067881|organism=Clytia hemisphaerica|type=transcript|length=9171bp|location=Sequence derived from alignment at scaffold_477:139829..148999+ (Clytia hemisphaerica)
TTTTATAGACtataattaaagaaaaaatgtctTTAGTGGCTGCTTatagc
gaaagtgaaagtgaaaacgAGAGTGACCAAGAACAAGAGAATCCAAACGA
AGTAAAAGTTGAAACTGCAAAAACAACTTTAAATGTCCACCAAGCTGATG
AAAAGCCACCGGTTGAAGAAGAAAGAACTggttttgaaattgaagatgag
GATGATTGGCAAACAGGTGATAGTGTAAACACAGCCCAAACCACAAATTT
GGGAGGAGAATCTTCTGCTgagtttttttctaaacttcCTGAGCCAGCAG
CTATTGAAAGTAAATCAACCGCTCCTATAAAGGTATTTGTTAAGAATTCT
TTTTGTTTGTCCAAATCTTTTGCATctcgattcttttttttttgcaattt
acCAGAATTTTTCTACCCTGACTGTTGTAATCAAGGTCGATATTCAAATC
TAAGATGTTTTCTGTCGATCCTCTGTCTGGTGAATGTGTTGGAAAAAAAC
CTGCCAAGCAAGAATTATTCACTTAGACGTTATTGCTGTACAGtaatcaa
aaagtatgcaactTGCCTTTTATTCATagcaaaagaaaatttcacaataa
agctaaaacaatacattaccAGACtggagttttttttataatgactatgc
tgTGTCTTTCAATTCGTAAGTCCTTTTTAatagagaaaacaatttatcag
aATACTTCCCTTTTTGGGTGAGTTTATGgcttgttttcaaatttttgcaa
agtttttgaatattttatttcgttattgaaaaagattgaagaagaagaag
atgaattTTTGAAGAAGAAACCATCCCTGGAagacaaattattcaaaaaa
gagCAAGCCCTATTGGAGAAAGAACTCAACGAGAAGAAGAAGCATGGAGA
TAAAGAAGACTCTAAACATTTCTTGAGCAAATTCACTAAAGGTAGTGGCG
GCGGTGGtggaaagaaatcaaagaatcAGAAAGTATTGATTTCCATACCA
ACGCTAGAGGATGTAAGTGtgtttttcagaatattttggAGACATGATAC
ATATGTAGGTGTAATGAGCAGCAATTACAACCAAAAACAATAATCAACCA
TAAAATTCTTTTGCACAAGTCGCTGTAATTGGGAGAATGTTTAACTACTC
GTGATTTTTATAATGTTATCCTTTGATAAGGTATTCAGTCCCTTtacaca
aattatttttatttggtaATTTCTATTATCGACTAAGAACTATTGttata
ttaaaaaattattcattAACTCATTAAACAGGATCATGGATATATGGTCC
TGTatataaatgaaacaaaaaGTTGCGATGAAAGGAATCATTCAATTTGT
ATTAGCTGGTCTTTACTGAGCAATGTAGTGTTCAGTATTTGTATATTTGG
CAATTATAGGGGCATGAAAGCTCATAAGTAttggatttttttgttgttgt
aatGAAATAATATcatttaatttgtaaaaatacgATCACAATTGACTTTG
CCATGACTTCAGATTGGAGCTGACAGTGATTCCGATGAAGAAAGCTACCA
ACCCAAACAAGAACCACAGAAATTCATGGCTAGTAAGGTATAATATCTAA
TTATACGTGTAGATAAAATGCTTTTGAATTATATATAAAAGGTCCCCCTA
TCGATTTATTAATGAAGGCAGATTTCAACCCTTTTTcgaattccaaattt
taaaaatttagcattcctttatatttttttaactttcaacAAACCgttta
aaaaaattaggaaCTCAAAGTATGTTTCTGTAAAGTTGCAAAAAGTACCA
CCAATTGGGGTTACTTTTAAAACCTCCAAACAGCAGACTCTGCATGTAAT
TGATTAATTATTTTAGCTGGCTGGAATATGATATAATTAAAAGCATGTTC
TGAATTTCTGACAAATAAATGAAGGACCAGAAGTATTTTTGGTCCAGAAT
ATGTTAACTTTAACTTGTGAAAGTAACCCTAACAAAGTTATGTAAtgctt
tttaaaacaaaagttttcttttctaaaGTCTATTCCATTGAACATATAAC
CTTAATCTAGTGTGGAATCTCCTATGAAGAATTGGGAGTCATTTATTTGC
CTGTTAGACCGCGCGACCCATGTGGTTTACATACAAACGCTAAATTGACA
AAGAAAAATGCAAGATCGAATCCGTCATTCGAAATGGGgcgacaagctgg
agtttttacaagctcttatttgatttggttggtcgttttaagatgtaata
aaagaatcttattactttttctaaagaacgcgtcatctctatcactttaa
atgaccaattagtgaagtattttgtaaaaattccaAGGCATCTCCCGAAA
TGGGGTGCAAATCTTTTAAGTGTTACTTTTGCTCGCCTGGCAAAGGTTAA
AGATCCCTCTCTAGCCTTAGACTAATCTCATTGATCTATTCTCCATTTCA
GAAACCTTCAGAGCCTTTGGCTACTCTTTATATtatgttcatgacgtaat
cttttgtACGGAAACACTCGAAAAACACTGCGCGTTTGCCACAAGGTTCA
CAGTTTAAATTTAAAACTGGAGGCAAACTCCTGGTgttttttgggtgttt
ccgtGTAAAAGATTACAttatgaatatcaagaataacTCATTGGCCTATT
CCCCATTTCAGAAATCTTCAGCATTATTCGCCATGCTGCCAAAGCCGAAG
AATAGCGTAACAGTCAGTGCTAACAAGAATCGTGTATTCAATCGTGAAGT
GAACAGACCCTTAGTACCACACACTGTGACCAAACATAAACCTCAAGCAA
AAGACACTTCTTCTAAATCGACCAGTATTAATGTCAACCCTGAAAGAAGT
GTTGCTACAGGAAATTCCAAAGTCAAAAATGATGTAGATTCGGAAGAGTC
TGAAGATGATGACGATGTTTCTGCCACAAGCTTTTTCTCTTTCGGCGAGA
AAAATACAACCGAAAAGAACACACCTATGGAAATGAAACCCGATGAAGAA
GTTCACAATAAAAAGGAGAATAATACCAAAACAGAGAATATATCAATGGA
AATTGTTAATGAAGTGACTTCCGTAAAACCTAAAGAACGCGAAACAAAAA
TAGAACCGAAACCCAATAAACCATCCTCCAATAACAAAGACAATTCATAT
TTTTCCACATTGTTTAAAAGTAAAACGAACTCGCAGACAGCTTCAGTAAA
AACCAATAAAGACATTTCAAATGACAACGATGTTAGAACTTCATGTACAG
ATTCGAATACAAAGAGCTCGATACAAACTTCTCATGGAATCACAGCACCT
TACGGACATAATTCTAGTGATTCTTCAGTAACTGCTCCATATGGTGGAAA
TAGCTCTAGTGTAACTGCGCCGTATGGGTCTAGTAATTCTGCAGTGACGG
CGCCCTATGGATCGGGTAATTCTGCAGTAACAGCGCCCTATGGGTCCGGT
AATTCTGCAGTAACGGCGCCCTACGGGTCACACAATAGCATATCTCAACA
ACACCAACAGATGCCTCAGAATCATGGTTACCCAACGAACGCAACTGACA
ATACCTTCTTTTCATACTCTCATGCAACTTCTACTAGCAGCAGTCAGGTA
GGTTGATGTGTTTTTATTGtgagcgaccgtagtgcagtggtagagcatcc
ggctatgTGCGCGAGGACGTGGGTTAAATCCCCGGCCggatcataccaaa
gacttcgtacgaaaatggtacttgatgcttctctgcttgatgctcagcaa
ttaagagaaggaccaagggtaagtggagcaattcaGGGAGAAAGAATGGC
GGTCTTCCCATCtgtgggtagatagctatcgaaagaggagccttcgggtc
gcctccgactgcggtcgcggCGGTCGCAGACTTATTGTGTAAAGTACGAT
TTTGGCCTGCGTACTCGTTACTTTACTTGGGATACTATAGGCAATTTGGT
GAAACTTTGACATATCGTGAATCGATCTTTACAAATTACTTCGTGCGGAA
AACCTTTTGCGAGTCGTCaaactttcttcattttcactaTTTCGTTAGAA
GGTGAactgaaaaattacttttacaTCCATCAACGTAAAGAATTATTTCT
AtggaaaaatcattttctcTAACGAGAATGAATTTACGCGAATCAGCTTT
TCAGAATATTTTGCGGAATTAACTTTTGCATATTTgccgaaaatccgcga
aaacttcgatttgaaaaaatatgtttattttataaaacaaaatatttttt
gaaaaataaaccttaTGAGACTTGATTATTTTGTTATAGCAGCCAGCACA
AGCATCTATGGATTTTTACCATCAACCAAATGAAGACACGCCAATTGACC
AAGAAGCTGTAAGTCTTTACTTTGTTTAAACGACTAATTCTATTTTTGCT
TCTCATGATTATGTAGCTATCTGGGGAACAAATCTTTGGAAATTTACGTT
TTGCCAAACTGAAAAAAGATCGCCCCTCATGAAGTTCTGAAGTTCTTTGA
AACGATTTGTTAGGGCTCTTaccaaaaattacttttttctaagattattc
AGAGATCAGTTCTTGAACCAGTCTACTTGAATTCAAAATACAACACAACA
CACAAAGTTTCTTAGGCTTctgttacatgttttttttctataagcatacc
gtttataagcatatacaggCTCAGTTGTtagtacctaaacaatggctttA
TTGTTTAAGAGCAATAGAATCCCTTAAGCATTATGCGAGCCTGGTATcac
aggaaaaagtcatcagATCACACGGGTGGGAAAACTTAAATTCCGACgcc
gtaattttcaaaaatcaatttttgcgtGTGATTTTATAAACTGATAAGGT
GTGATTGTTTTGGCAGTGTGATTTCCGATATCACACTGtggaatttttca
aatagttatttttattttttgaaattcggCGTGTGAAATCCAATTCAACA
CTTTTAAACTTCACTGAAAAGGCTTTATCGAAATGACACGTGTGATTTCT
AATTTCCGCAGGCAAATAAAGTTTTTCAGCATGTTGTACACTTTAAATTT
TCGGCgtgtgaaatccaatttaatacTTTAAAACTTCACTGAAAATGCTT
TATCAAAATCACACGTGTTAATTCTAATTTCCGCAggcaaataaaacttt
tcagtaTGTTGTACACTATAAATTTTCGGCgtgtgaaatccaatttaaca
cTTTGTCAAACACTGGCAACACTAGTCCAAGAAGTATAAAACTTACacta
caaaactctaaaaacgtAGAAGGACAAGATAGAAACAAGAAATCGCAGTC
ATTAGTTCCCACGGGTGGGAAAGTCAAATTAACACGGTGGGAAGGTACGA
TTCCCACCCTTGTACTACGCATGCGTAAGGAAAACCACAAGTGAAGATTG
GGCCAAAACTGTTCAGATTGCATTCAAATCATAACATTATAAGGGTGTat
tcgatcagtgtgtaacacaacgctAAAGGCGAGGCGTCCCGCAAGGGCGG
CCTCAttcgttcgcaatggacttgcatcgcaagggctcagtggatcggcg
agacgggtttgaggtcattgaattggctctctagtgcagctccactgttg
tgacaaaagtgccgggattctcaaagtagcgcaagtacatgacagaacga
atggaagctatcgagccaatgctcacgaatgatcgaatacatttaacAAT
TTATCAAATACAAATCAAAGCCATTTTCCAAAAACTTGGTGGGGAATCAA
AATTTCTGCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCGT
GTGGTTTTCGATAAGATAAGCGAGTGTAAAATGCTAAATCCGACGTGGGA
TTTTCAATTTAACACGCGAGGAGAGAGGGCCTGAAGTCAGAAATTCGACA
TGGGATTTTAGATTTAACACGTGGGATTTTCGATTTAACACGTGTATTGT
TCGATTCAGCACACACTGTTTAAAGCGTGTGATCCTGCGTTAACCACGTC
GGAAATTCAATTCTACACGTGTGATTTTGAGGGGTGTGATTTCGCGTTTC
CCACCGGCGTAAAAACGAACCGATTCCCACGCGTGGGATAGCAGTGTGAA
ATGTATACTTTCACACCGTGTGATTTTCACTTTCACACCTGTGTGatttg
atgactttttcctgtTTATAGGGGTAGACACTTTacttttgcttataaaa
aaacatgttgtAAAAGTCATTGATTTATTTAACATTCTTTTCATTTAAAG
ATGAGGGCGTTGCAAGGGCGTAAGCGAAGGAGAGGTGAAGAGATCAACAT
TATTGATGTCAACGCACAAGACCTCCAAGTTGACAAAGATGAATACCTCA
AAAATCTCACCGTCGAGTCTGGATATAAAAACAAAGCTGtaagtttacac
gttttttatgagagcatccaaaatttttcaattcttgcgatgttctttac
tttttgtatttgaagcctaaaaatgttcttaatgcgttcttactttcacc
attttgtaagtatttttgtccaattttttaagaaaatgggtgttttagag
tccgcgaagccttaaatgttcttaacttgtccttaatattttggccattt
aagtcttatgttctcatatagttcGTATAAAAAAACGCGTACTCTGCACG
ATTTCGATTTAGAATTCGATGGGATAAATTTGGGTTACCACTACCGTACT
TTTTCGTATTTGATATCGACAAGATAATTTAATCCCGAAGTGGGCGGGGA
GGGGTATCCAATATCTTTCAGTGTTAGATTTTACAAAGTAAAAAGGTTAA
TGGGAGAAAGGGGACAATATAAACATACACAGAGAAGGTGTGacacagta
gcgtggtgggtcgactaaaCCTTGGTAGGCAATCTAGGAAGACTTTGATT
TTGGTGCCCCctatgaaaagtaaatatttctaaaaaaataacgCGAGCGT
gaatttttgggtattttctctctttttggccgaaaactgcTATATTtaag
gtgtaaaagagcaaaggggCGTCGAAATTAGTAATTAGAGGCGTCTTTTT
GCACCCTTTGTTTTTCGGCGCCCCTCTGAAAAGCCTTGCTGGGGGGGGAC
ATTAGCTGGCCCCCCCCCTGTCACTACGCTACTGGTGTGACaggtcaaaa
agtttcttttgtgCTGGGTTTAAGAAGCGTAGGATTCGTCCtttgatctt
tttttaaagGGAGAATGTTCTCTTTAAAGCTATACTTTGAGACAACATAC
GATCTCGCCAAAATGGAAACACCAATTTTgaatacaaatttccaaaaata
attggCATTGAATTATAAAGATTTTTATACTAGGGAAACATAAAACTATC
CAGAAATCTAGTTCTTTATTTAGTTTTAGTTGTTTCGAAGAATAGCTTTG
GAGAACCATTCCCTTTAAGTCTTTAGAATCCTTTACCATCTAGCATTTTc
ttattgtttttcttttctttacagCCTCAAGATGCCGGCATATCTAGTCA
ACAAAAACGCAAACATCAAATCACGTATCTGGCTTTTCAGGTAAACAATC
TAGGTTTTCTGTTGTAACCTTTCATAAGTGGCCCGGTCAAAATTCAGTTT
CTGTTACTAATTTTCCACTTatgatttttctcaaattatAAAGTTGATAT
TTAAAAGTTAATGTGTTAACGTCTTAACGTCTGGGGccacttgaaacatt
tttcaccaaatagaaacatttgaaaactgGAACAAGCAGAAAGATTCACT
TTGATGGAAAAGTTGCTAGTGACCCCACCTTAAATGACGGAACGAAAACA
TATACAAATCGACTTCTGGAACAaaaaaaatggttcaaaaaattcATGAA
CAGTTCCTGTAGTTCCAGGAAACTTTTTACCTTTAACGACAGTAGTTATT
GTAACGTcgaaattgatttcaaaaacctttttccAGTAGAGTgcaaaatt
ttgatcaaatatGCAGAAAAAAGCCAAGTTAAACTACCCAGATAAACTTT
GTTATAATTTTATTAAACCAGGAAAAAAACTTGAAAGTGTCCTAgaaaat
ttattattattatcatagGCAAAAGAGCGTGAATTTGAATTGCGCCAATC
GTGGGCTGATAGCCGAGCGAGTAAGCAACAAACACAATCCAAGTATGGTT
TCTGAGTTGTGTTGAAGCTACACCCTCCCTGCCCTGTCTTGGATGTTATT
TGCAGTCCCCGAATGTATCAGAAGTTTTTTGGAATTATTCCTGGATTGAA
TTGGATACCACGAGATCCCACTCCTCCTGAAATTTGACTCGAAGCCAAAT
GACGAGCAAACTATCTGTGAAGGCGTACCTACCACAGACCTgaaagggtc
ggttttttccgATTTGCCAGATTCACCCATGTTTGCTGTTTTGTGAAGCT
TAGCTGTCGACTTTCACAACTCAATGAATCAGTCAAGGTCATGATGACAG
CAATGAAAACAATACGTTTAATGAACGATGAATTTCCAATGTGGAACTAT
TGAAGAACGAATTCAACCTGATATATATTGATGATAACAGCGACTTTAAA
GTTTCAATGAGGCCGTTGTATGCTTTCATAAATGGTTTTTTGAccagaaa
aagaaatttaatgaaGGATACTTAAAAAATAATAGATTCAACCTGAGAAA
GGTTCATGGAAATGGTGTTGTGTAAAATCCGGGGGGGCActtgattcaaa
aacgaccatacgtgtggcccaaaattaggcctttgaaatcgtaCTCTAAC
AGTACAGGGagaattttgcaaattttgagcaaattttagcgaaaaatcga
cccttacgtgcattttcttgaaagtttttttaccattttttcaggcaaaa
tatggtcagattttcgaatttttactCCTtgagagtgcaatttttcttat
ctttgcTGATTatttgacccttacagtgcactttgggaatgttagaaaat
atacccttaagggtcacacgtatggtaggtcatttaccttgagtgccccc
cccccctcggggtAAAACGAAACTATGTTTTGATGATGGTTTTTGACCAA
GAAAAGTCaatgaaagatatttaaaaaaagtttaatgGATGAGTTTTTAG
AATATATAAACCTTTTGTTGCTTGTATATAACGCTTTCTTACAAATATCA
AGTTCACTGATTATTaacaga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042396XLOC_042396Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067881-exon-scaffold_477-1491911889:139829..140160TCONS_00067881-exon-scaffold_477-1491911889:139829..140160Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1510915933:139829..140160TCONS_00067881-exon-scaffold_477-1510915933:139829..140160Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1575043694:139829..140160TCONS_00067881-exon-scaffold_477-1575043694:139829..140160Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1491911889:140613..140840TCONS_00067881-exon-scaffold_477-1491911889:140613..140840Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1510915933:140613..140840TCONS_00067881-exon-scaffold_477-1510915933:140613..140840Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1575043694:140613..140840TCONS_00067881-exon-scaffold_477-1575043694:140613..140840Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1491911889:141341..141415TCONS_00067881-exon-scaffold_477-1491911889:141341..141415Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1510915933:141341..141415TCONS_00067881-exon-scaffold_477-1510915933:141341..141415Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1575043694:141341..141415TCONS_00067881-exon-scaffold_477-1575043694:141341..141415Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1491911889:142490..143425TCONS_00067881-exon-scaffold_477-1491911889:142490..143425Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1510915933:142490..143425TCONS_00067881-exon-scaffold_477-1510915933:142490..143425Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1575043694:142490..143425TCONS_00067881-exon-scaffold_477-1575043694:142490..143425Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1491911889:144121..144186TCONS_00067881-exon-scaffold_477-1491911889:144121..144186Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1510915933:144121..144186TCONS_00067881-exon-scaffold_477-1510915933:144121..144186Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1575043694:144121..144186TCONS_00067881-exon-scaffold_477-1575043694:144121..144186Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1491911889:146079..146216TCONS_00067881-exon-scaffold_477-1491911889:146079..146216Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1510915933:146079..146216TCONS_00067881-exon-scaffold_477-1510915933:146079..146216Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1575043694:146079..146216TCONS_00067881-exon-scaffold_477-1575043694:146079..146216Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1491911889:147303..147368TCONS_00067881-exon-scaffold_477-1491911889:147303..147368Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1510915933:147303..147368TCONS_00067881-exon-scaffold_477-1510915933:147303..147368Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1575043694:147303..147368TCONS_00067881-exon-scaffold_477-1575043694:147303..147368Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1491911889:147897..148999TCONS_00067881-exon-scaffold_477-1491911889:147897..148999Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1510915933:147897..148999TCONS_00067881-exon-scaffold_477-1510915933:147897..148999Clytia hemisphaericaexon
TCONS_00067881-exon-scaffold_477-1575043694:147897..148999TCONS_00067881-exon-scaffold_477-1575043694:147897..148999Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_477supercontigscaffold_477:139829..148999 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.752095	2.37245	0.596613	4.77544e-09	1.33985	1.33244	1.92217	4.49098	1.64415	2.66872	0	1.83509	0.82623	0.998296	0.845012	0.802162	0.919397	1.0769	2.47646	0	1.52093e-09	0.678283	4.5556	4.68286	1.67282	4.47232	0.97079	0.643317	2.69219	2.73245
Blast
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BLAST of TCONS_00067881 vs. Swiss-Prot (Human)
Match: PRCC (Proline-rich protein PRCC OS=Homo sapiens GN=PRCC PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.788e-19
Identity = 49/106 (46.23%), Postives = 69/106 (65.09%), Query Frame = 3 
Query: 1623 IDQEAMRALQGRKRRRGEEINIIDVNAQDLQVDKDEYL-KNLTVE----SGYKNKAPQDAGISSQQKRKHQITYLAFQAKEREFELRQSWADSRASKQQTQSKYGF 1925
            ID EA + LQG++ R  EEIN +++   D      +++ K+LT E    S  K K  Q  G   QQ+RKHQITYL  QAKERE EL+ +W++++ S++QTQ+KYGF
Sbjct:  389 IDDEAFKRLQGKRNRGREEINFVEIKGDDQLSGAQQWMTKSLTEEKTMKSFSKKKGEQPTG---QQRRKHQITYLIHQAKERELELKNTWSENKLSRRQTQAKYGF 491
The following BLAST results are available for this feature:
BLAST of TCONS_00067881 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRCC4.788e-1946.23Proline-rich protein PRCC OS=Homo sapiens GN=PRCC ... [more]
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